Protein–RNA interactions for Protein: P56645

PER3, Period circadian protein homolog 3, humanhuman

Predictions only

Length 1,201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PER3P56645 AL136234.1-201ENST00000437080 349 ntTSL 2 BASIC3.91□□□□□ -1.78
PER3P56645 SNORD19B-201ENST00000459623 84 ntBASIC3.91□□□□□ -1.78
PER3P56645 RPL21P41-201ENST00000459863 264 ntBASIC3.91□□□□□ -1.78
PER3P56645 AC096736.2-201ENST00000507972 175 ntTSL 3 BASIC3.91□□□□□ -1.78
PER3P56645 AC093297.2-204ENST00000508945 295 ntTSL 3 BASIC3.91□□□□□ -1.78
PER3P56645 AC104136.1-201ENST00000512969 394 ntBASIC3.91□□□□□ -1.78
PER3P56645 RN7SKP13-201ENST00000515933 244 ntBASIC3.91□□□□□ -1.78
PER3P56645 SCARNA15.2-201ENST00000516409 127 ntBASIC3.91□□□□□ -1.78
PER3P56645 RNU6-1073P-201ENST00000517182 106 ntBASIC3.91□□□□□ -1.78
PER3P56645 AC025871.1-202ENST00000518819 432 ntTSL 3 BASIC3.91□□□□□ -1.78
PER3P56645 AP001825.1-201ENST00000534275 351 ntTSL 2 BASIC3.91□□□□□ -1.78
PER3P56645 AC011611.2-201ENST00000549888 358 ntTSL 3 BASIC3.91□□□□□ -1.78
PER3P56645 NDUFB1-204ENST00000555441 458 ntAPPRIS P1 TSL 3 BASIC3.91□□□□□ -1.78
PER3P56645 MIR5692C1-201ENST00000585309 91 ntBASIC3.91□□□□□ -1.78
PER3P56645 AL590235.2-201ENST00000602641 632 ntTSL 5 BASIC3.91□□□□□ -1.78
PER3P56645 AC079587.1-201ENST00000603846 277 ntBASIC3.91□□□□□ -1.78
PER3P56645 AL360267.1-201ENST00000607309 666 ntTSL 4 BASIC3.91□□□□□ -1.78
PER3P56645 RASSF8-215ENST00000611440 852 ntTSL 5 BASIC3.91□□□□□ -1.78
PER3P56645 AC090132.2-201ENST00000615881 347 ntBASIC3.91□□□□□ -1.78
PER3P56645 MIR6875-201ENST00000617506 72 ntBASIC3.91□□□□□ -1.78
PER3P56645 AC022418.1-201ENST00000624118 445 ntBASIC3.91□□□□□ -1.78
PER3P56645 AL359757.2-201ENST00000624309 274 ntBASIC3.91□□□□□ -1.78
PER3P56645 FAM49B-212ENST00000519110 1902 ntAPPRIS P1 TSL 5 BASIC3.91□□□□□ -1.78
PER3P56645 BRCA2-201ENST00000380152 11986 ntAPPRIS P1 TSL 5 BASIC3.9□□□□□ -1.78
PER3P56645 MIR372-201ENST00000362225 67 ntBASIC3.9□□□□□ -1.79
PER3P56645 Y_RNA.212-201ENST00000364177 102 ntBASIC3.9□□□□□ -1.79
PER3P56645 RNA5SP175-201ENST00000364275 119 ntBASIC3.9□□□□□ -1.79
PER3P56645 SNORD116-29-201ENST00000384516 83 ntBASIC3.9□□□□□ -1.79
PER3P56645 MIR450B-201ENST00000401182 78 ntBASIC3.9□□□□□ -1.79
PER3P56645 PVALB-202ENST00000404171 422 ntTSL 2 BASIC3.9□□□□□ -1.79
PER3P56645 MIR548F5-201ENST00000408421 86 ntBASIC3.9□□□□□ -1.79
PER3P56645 AL356095.1-201ENST00000417217 199 ntBASIC3.9□□□□□ -1.79
PER3P56645 AF228730.4-201ENST00000421457 183 ntBASIC3.9□□□□□ -1.79
PER3P56645 HSPD1P21-201ENST00000436541 245 ntBASIC3.9□□□□□ -1.79
PER3P56645 AL360271.2-201ENST00000447710 161 ntBASIC3.9□□□□□ -1.79
PER3P56645 AL445465.2-201ENST00000455530 461 ntTSL 2 BASIC3.9□□□□□ -1.79
PER3P56645 VN1R17P-201ENST00000472048 1090 ntBASIC3.9□□□□□ -1.79
PER3P56645 AC092994.1-201ENST00000498604 279 ntTSL 3 BASIC3.9□□□□□ -1.79
PER3P56645 SEMA6A-AS1-204ENST00000510682 521 ntTSL 5 BASIC3.9□□□□□ -1.79
PER3P56645 GYPA-208ENST00000512064 441 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
PER3P56645 AC097103.1-201ENST00000512398 273 ntTSL 3 BASIC3.9□□□□□ -1.79
PER3P56645 AC079160.1-201ENST00000513489 739 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
PER3P56645 SNORA70.16-201ENST00000516390 95 ntBASIC3.9□□□□□ -1.79
PER3P56645 SNORA25.17-201ENST00000517184 124 ntBASIC3.9□□□□□ -1.79
PER3P56645 RNA5SP454-201ENST00000517231 127 ntBASIC3.9□□□□□ -1.79
PER3P56645 COPS8P3-201ENST00000526024 482 ntBASIC3.9□□□□□ -1.79
PER3P56645 AP005597.4-201ENST00000526762 229 ntBASIC3.9□□□□□ -1.79
PER3P56645 AC004024.1-201ENST00000549244 247 ntBASIC3.9□□□□□ -1.79
PER3P56645 LINC02277-201ENST00000553386 453 ntTSL 2 BASIC3.9□□□□□ -1.79
PER3P56645 FRG2DP-202ENST00000566967 323 ntBASIC3.9□□□□□ -1.79
PER3P56645 MIR3921-201ENST00000577308 85 ntBASIC3.9□□□□□ -1.79
PER3P56645 AC023043.2-201ENST00000589678 1026 ntBASIC3.9□□□□□ -1.79
PER3P56645 AC073539.2-201ENST00000597113 165 ntBASIC3.9□□□□□ -1.79
PER3P56645 AL589765.7-201ENST00000601684 629 ntTSL 3 BASIC3.9□□□□□ -1.79
PER3P56645 AC012119.1-201ENST00000603184 222 ntBASIC3.9□□□□□ -1.79
PER3P56645 AC098826.3-201ENST00000603823 466 ntBASIC3.9□□□□□ -1.79
PER3P56645 APOOP1-201ENST00000604695 592 ntBASIC3.9□□□□□ -1.79
PER3P56645 AL138726.1-201ENST00000614873 333 ntBASIC3.9□□□□□ -1.79
PER3P56645 C2orf91-203ENST00000615044 393 ntAPPRIS ALT2 TSL 5 BASIC3.9□□□□□ -1.79
PER3P56645 TEX41-265ENST00000627785 704 ntTSL 5 BASIC3.9□□□□□ -1.79
PER3P56645 AL359313.1-202ENST00000635073 544 ntTSL 4 BASIC3.9□□□□□ -1.79
PER3P56645 CCDC146-201ENST00000285871 3333 ntAPPRIS P2 TSL 1 (best) BASIC3.9□□□□□ -1.79
PER3P56645 MBNL1-211ENST00000463374 5092 ntAPPRIS P4 TSL 1 (best) BASIC3.9□□□□□ -1.79
PER3P56645 LRMP-201ENST00000354454 2504 ntAPPRIS P2 TSL 1 (best) BASIC3.9□□□□□ -1.79
PER3P56645 PTAR1-202ENST00000377200 9876 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
PER3P56645 PTER-201ENST00000298942 3448 ntTSL 5 BASIC3.9□□□□□ -1.79
PER3P56645 ZNF804A-202ENST00000613975 3986 ntTSL 5 BASIC3.9□□□□□ -1.79
PER3P56645 KCNT2-206ENST00000609185 3622 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
PER3P56645 RNF17-204ENST00000339524 2203 ntTSL 2 BASIC3.9□□□□□ -1.79
PER3P56645 KIF2A-205ENST00000506857 2219 ntTSL 2 BASIC3.9□□□□□ -1.79
PER3P56645 ARHGAP21-218ENST00000636789 4210 ntTSL 2 BASIC3.9□□□□□ -1.79
PER3P56645 OR6A2-202ENST00000641196 4295 ntAPPRIS P1 BASIC3.9□□□□□ -1.79
PER3P56645 ABCA12-202ENST00000389661 7005 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
PER3P56645 MGA-207ENST00000566586 14439 ntAPPRIS ALT2 TSL 1 (best) BASIC3.89□□□□□ -1.79
PER3P56645 UBE2D3-233ENST00000618836 3472 ntAPPRIS ALT1 TSL 5 BASIC3.89□□□□□ -1.79
PER3P56645 MS4A14-208ENST00000531783 2910 ntAPPRIS ALT2 TSL 5 BASIC3.89□□□□□ -1.79
PER3P56645 AKAP6-201ENST00000280979 15006 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
PER3P56645 Y_RNA.135-201ENST00000363439 95 ntBASIC3.89□□□□□ -1.79
PER3P56645 Y_RNA.138-201ENST00000363462 102 ntBASIC3.89□□□□□ -1.79
PER3P56645 RNU6-512P-201ENST00000364438 103 ntBASIC3.89□□□□□ -1.79
PER3P56645 RNU6-1303P-201ENST00000364841 107 ntBASIC3.89□□□□□ -1.79
PER3P56645 RNA5SP151-201ENST00000365632 117 ntBASIC3.89□□□□□ -1.79
PER3P56645 Y_RNA.384-201ENST00000383909 102 ntBASIC3.89□□□□□ -1.79
PER3P56645 RNU6-1227P-201ENST00000383981 107 ntBASIC3.89□□□□□ -1.79
PER3P56645 RNU6-45P-201ENST00000384471 107 ntBASIC3.89□□□□□ -1.79
PER3P56645 MIR578-201ENST00000384828 96 ntBASIC3.89□□□□□ -1.79
PER3P56645 CRYBB2P1-203ENST00000415709 538 ntBASIC3.89□□□□□ -1.79
PER3P56645 AL592045.1-201ENST00000429867 352 ntBASIC3.89□□□□□ -1.79
PER3P56645 FTH1P6-201ENST00000430768 320 ntBASIC3.89□□□□□ -1.79
PER3P56645 PLCE1-AS2-203ENST00000433038 396 ntTSL 2 BASIC3.89□□□□□ -1.79
PER3P56645 AF228730.2-201ENST00000438784 848 ntBASIC3.89□□□□□ -1.79
PER3P56645 RPL23AP89-201ENST00000439324 255 ntBASIC3.89□□□□□ -1.79
PER3P56645 AL121760.1-201ENST00000447206 346 ntTSL 2 BASIC3.89□□□□□ -1.79
PER3P56645 AC008264.1-201ENST00000447612 367 ntBASIC3.89□□□□□ -1.79
PER3P56645 AC098820.1-201ENST00000453157 512 ntTSL 2 BASIC3.89□□□□□ -1.79
PER3P56645 TH2LCRR-203ENST00000457489 439 ntTSL 3 BASIC3.89□□□□□ -1.79
PER3P56645 MTND5P5-201ENST00000503764 376 ntBASIC3.89□□□□□ -1.79
PER3P56645 AC093689.1-201ENST00000514737 246 ntTSL 5 BASIC3.89□□□□□ -1.79
PER3P56645 SCARNA15.1-201ENST00000516384 125 ntBASIC3.89□□□□□ -1.79
PER3P56645 RNU6-1256P-201ENST00000516539 103 ntBASIC3.89□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 172.1 ms