Protein–RNA interactions for Protein: P56524

HDAC4, Histone deacetylase 4, humanhuman

Predictions only

Length 1,084 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4P56524 Y_RNA.22-201ENST00000362492 102 ntBASIC3.47□□□□□ -1.85
HDAC4P56524 RNU6-1284P-201ENST00000363701 100 ntBASIC3.47□□□□□ -1.85
HDAC4P56524 RNY1P12-201ENST00000364251 105 ntBASIC3.47□□□□□ -1.85
HDAC4P56524 LINC00862-202ENST00000367356 759 ntTSL 3 BASIC3.47□□□□□ -1.85
HDAC4P56524 RNU1-39P-201ENST00000383897 165 ntBASIC3.47□□□□□ -1.85
HDAC4P56524 RPS4XP3-201ENST00000398541 413 ntBASIC3.47□□□□□ -1.85
HDAC4P56524 RNU2-36P-201ENST00000410361 191 ntBASIC3.47□□□□□ -1.85
HDAC4P56524 AL353193.1-201ENST00000421444 268 ntBASIC3.47□□□□□ -1.85
HDAC4P56524 AL590783.1-201ENST00000424138 456 ntTSL 2 BASIC3.47□□□□□ -1.85
HDAC4P56524 USP12PX-201ENST00000432383 1057 ntBASIC3.47□□□□□ -1.85
HDAC4P56524 RPL23AP30-201ENST00000432419 501 ntBASIC3.47□□□□□ -1.85
HDAC4P56524 AC125238.1-201ENST00000448842 249 ntBASIC3.47□□□□□ -1.85
HDAC4P56524 AC068580.2-201ENST00000449749 338 ntTSL 5 BASIC3.47□□□□□ -1.85
HDAC4P56524 AC140076.1-201ENST00000449897 361 ntBASIC3.47□□□□□ -1.85
HDAC4P56524 HMGN2P13-201ENST00000476476 274 ntBASIC3.47□□□□□ -1.85
HDAC4P56524 ANKRD7-204ENST00000477532 744 ntTSL 5 BASIC3.47□□□□□ -1.85
HDAC4P56524 AC126182.1-201ENST00000478134 357 ntBASIC3.47□□□□□ -1.85
HDAC4P56524 RPL30P14-201ENST00000482744 348 ntBASIC3.47□□□□□ -1.85
HDAC4P56524 AC019235.1-201ENST00000503847 207 ntBASIC3.47□□□□□ -1.85
HDAC4P56524 ARL4AP2-201ENST00000507378 601 ntBASIC3.47□□□□□ -1.85
HDAC4P56524 CSN1S2AP-204ENST00000512167 671 ntTSL 3 BASIC3.47□□□□□ -1.85
HDAC4P56524 AL117351.2-201ENST00000513571 157 ntBASIC3.47□□□□□ -1.85
HDAC4P56524 RNA5SP385-201ENST00000515947 110 ntBASIC3.47□□□□□ -1.85
HDAC4P56524 MTND4LP26-201ENST00000518144 282 ntBASIC3.47□□□□□ -1.85
HDAC4P56524 OR5G4P-201ENST00000525251 760 ntBASIC3.47□□□□□ -1.85
HDAC4P56524 AC087318.1-201ENST00000536786 389 ntTSL 3 BASIC3.47□□□□□ -1.85
HDAC4P56524 AC023796.2-201ENST00000545410 451 ntTSL 3 BASIC3.47□□□□□ -1.85
HDAC4P56524 RPL23AP84-201ENST00000571193 464 ntBASIC3.47□□□□□ -1.85
HDAC4P56524 SDR42E1P2-201ENST00000614861 481 ntBASIC3.47□□□□□ -1.85
HDAC4P56524 AC090517.2-201ENST00000614966 680 ntBASIC3.47□□□□□ -1.85
HDAC4P56524 MIR6076-201ENST00000617521 113 ntBASIC3.47□□□□□ -1.85
HDAC4P56524 AL356321.1-201ENST00000621360 228 ntBASIC3.47□□□□□ -1.85
HDAC4P56524 AC008781.3-201ENST00000622826 335 ntTSL 2 BASIC3.47□□□□□ -1.85
HDAC4P56524 SLC27A2-203ENST00000544960 2025 ntTSL 2 BASIC3.47□□□□□ -1.85
HDAC4P56524 NDUFAF4-201ENST00000316149 2399 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
HDAC4P56524 PLSCR5-201ENST00000443512 1969 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
HDAC4P56524 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
HDAC4P56524 AC103988.1-201ENST00000566382 2177 ntBASIC3.46□□□□□ -1.85
HDAC4P56524 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC3.46□□□□□ -1.86
HDAC4P56524 ATP2C1-202ENST00000359644 3401 ntAPPRIS P3 TSL 1 (best) BASIC3.46□□□□□ -1.86
HDAC4P56524 EIF2AK2-204ENST00000405334 1533 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
HDAC4P56524 VBP1-204ENST00000625964 1547 ntTSL 5 BASIC3.46□□□□□ -1.86
HDAC4P56524 IL6ST-205ENST00000381294 2574 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
HDAC4P56524 EQTN-201ENST00000380031 725 ntAPPRIS ALT2 TSL 1 (best) BASIC3.46□□□□□ -1.86
HDAC4P56524 TANK-204ENST00000403609 555 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
HDAC4P56524 AL359634.1-202ENST00000404721 284 ntBASIC3.46□□□□□ -1.86
HDAC4P56524 RNU4-55P-201ENST00000410731 137 ntBASIC3.46□□□□□ -1.86
HDAC4P56524 RNA5SP31-201ENST00000411144 127 ntBASIC3.46□□□□□ -1.86
HDAC4P56524 AC004014.1-201ENST00000413406 538 ntTSL 4 BASIC3.46□□□□□ -1.86
HDAC4P56524 RPL7P46-201ENST00000425129 740 ntBASIC3.46□□□□□ -1.86
HDAC4P56524 MTCO3P30-201ENST00000426425 670 ntBASIC3.46□□□□□ -1.86
HDAC4P56524 LINC02541-201ENST00000427157 327 ntTSL 3 BASIC3.46□□□□□ -1.86
HDAC4P56524 ATP6V0E1P4-201ENST00000427294 242 ntBASIC3.46□□□□□ -1.86
HDAC4P56524 MTND3P21-201ENST00000433774 331 ntBASIC3.46□□□□□ -1.86
HDAC4P56524 HIGD1AP11-201ENST00000438361 280 ntBASIC3.46□□□□□ -1.86
HDAC4P56524 AC007879.3-202ENST00000448786 823 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
HDAC4P56524 AC003071.1-201ENST00000451219 789 ntBASIC3.46□□□□□ -1.86
HDAC4P56524 CYCSP35-201ENST00000451978 304 ntBASIC3.46□□□□□ -1.86
HDAC4P56524 AC005538.1-201ENST00000455991 594 ntTSL 3 BASIC3.46□□□□□ -1.86
HDAC4P56524 AC010631.1-201ENST00000474150 156 ntBASIC3.46□□□□□ -1.86
HDAC4P56524 RPL31P60-201ENST00000478450 367 ntBASIC3.46□□□□□ -1.86
HDAC4P56524 AC108727.1-201ENST00000513802 393 ntTSL 2 BASIC3.46□□□□□ -1.86
HDAC4P56524 RNU6-390P-201ENST00000516259 103 ntBASIC3.46□□□□□ -1.86
HDAC4P56524 RNU6-711P-201ENST00000517255 106 ntBASIC3.46□□□□□ -1.86
HDAC4P56524 AP000873.2-206ENST00000529811 429 ntTSL 2 BASIC3.46□□□□□ -1.86
HDAC4P56524 AC008114.1-201ENST00000544122 427 ntTSL 2 BASIC3.46□□□□□ -1.86
HDAC4P56524 AC128657.1-201ENST00000549459 145 ntBASIC3.46□□□□□ -1.86
HDAC4P56524 AC099793.1-201ENST00000567538 285 ntTSL 3 BASIC3.46□□□□□ -1.86
HDAC4P56524 AC005951.2-201ENST00000576282 495 ntBASIC3.46□□□□□ -1.86
HDAC4P56524 MIR3124-201ENST00000582636 67 ntBASIC3.46□□□□□ -1.86
HDAC4P56524 GLUD1P4-201ENST00000590914 418 ntBASIC3.46□□□□□ -1.86
HDAC4P56524 ZNF788-206ENST00000596883 692 ntTSL 3 BASIC3.46□□□□□ -1.86
HDAC4P56524 HOTAIRM1_2.1-201ENST00000616712 215 ntBASIC3.46□□□□□ -1.86
HDAC4P56524 AL359880.1-201ENST00000621879 266 ntBASIC3.46□□□□□ -1.86
HDAC4P56524 SEPT14P19-203ENST00000633205 211 ntBASIC3.46□□□□□ -1.86
HDAC4P56524 C20orf24-208ENST00000639924 351 ntTSL 5 BASIC3.46□□□□□ -1.86
HDAC4P56524 HSPE1P11-201ENST00000339579 310 ntBASIC3.45□□□□□ -1.86
HDAC4P56524 Y_RNA.409-201ENST00000383990 98 ntBASIC3.45□□□□□ -1.86
HDAC4P56524 SNORA1.3-201ENST00000384676 136 ntBASIC3.45□□□□□ -1.86
HDAC4P56524 RNVU1-14-201ENST00000384770 164 ntBASIC3.45□□□□□ -1.86
HDAC4P56524 MTCO3P40-201ENST00000392516 676 ntBASIC3.45□□□□□ -1.86
HDAC4P56524 RPL5P18-201ENST00000406671 891 ntBASIC3.45□□□□□ -1.86
HDAC4P56524 RNU6-1077P-201ENST00000410506 102 ntBASIC3.45□□□□□ -1.86
HDAC4P56524 AL589765.2-201ENST00000420382 424 ntTSL 3 BASIC3.45□□□□□ -1.86
HDAC4P56524 C1orf195-201ENST00000424792 255 ntTSL 2 BASIC3.45□□□□□ -1.86
HDAC4P56524 AC097713.2-201ENST00000430199 356 ntBASIC3.45□□□□□ -1.86
HDAC4P56524 NDUFB4P6-201ENST00000436819 366 ntBASIC3.45□□□□□ -1.86
HDAC4P56524 RPL23AP22-201ENST00000437556 453 ntBASIC3.45□□□□□ -1.86
HDAC4P56524 MACC1-AS1-201ENST00000439285 639 ntTSL 3 BASIC3.45□□□□□ -1.86
HDAC4P56524 MTATP6P30-201ENST00000443540 664 ntBASIC3.45□□□□□ -1.86
HDAC4P56524 AC092264.1-201ENST00000456002 713 ntTSL 5 BASIC3.45□□□□□ -1.86
HDAC4P56524 AC013267.1-201ENST00000458227 267 ntBASIC3.45□□□□□ -1.86
HDAC4P56524 Z84488.1-201ENST00000476099 530 ntTSL 2 BASIC3.45□□□□□ -1.86
HDAC4P56524 AL049874.1-201ENST00000489560 388 ntBASIC3.45□□□□□ -1.86
HDAC4P56524 LINC02198-202ENST00000505371 526 ntTSL 5 BASIC3.45□□□□□ -1.86
HDAC4P56524 RNU2-10P-201ENST00000516375 211 ntBASIC3.45□□□□□ -1.86
HDAC4P56524 RNU1-103P-201ENST00000516502 125 ntBASIC3.45□□□□□ -1.86
HDAC4P56524 RNU4ATAC3P-201ENST00000516699 126 ntBASIC3.45□□□□□ -1.86
HDAC4P56524 AK6P1-201ENST00000540219 478 ntBASIC3.45□□□□□ -1.86
HDAC4P56524 AC093012.1-202ENST00000549403 582 ntBASIC3.45□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 108.7 ms