Protein–RNA interactions for Protein: P55344

LIM2, Lens fiber membrane intrinsic protein, humanhuman

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIM2P55344 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC2.45□□□□□ -2.02
LIM2P55344 DUXAP5-201ENST00000529668 529 ntBASIC2.45□□□□□ -2.02
LIM2P55344 SNHG1-210ENST00000539303 240 ntTSL 3 BASIC2.45□□□□□ -2.02
LIM2P55344 AL445074.1-201ENST00000555362 318 ntTSL 2 BASIC2.45□□□□□ -2.02
LIM2P55344 AL670379.6-201ENST00000603753 252 ntBASIC2.45□□□□□ -2.02
LIM2P55344 AL670379.11-201ENST00000604059 253 ntBASIC2.45□□□□□ -2.02
LIM2P55344 AC008162.1-201ENST00000604718 254 ntBASIC2.45□□□□□ -2.02
LIM2P55344 AL670379.1-201ENST00000604752 252 ntBASIC2.45□□□□□ -2.02
LIM2P55344 AL670379.5-201ENST00000605253 252 ntBASIC2.45□□□□□ -2.02
LIM2P55344 AL670379.12-201ENST00000605291 253 ntBASIC2.45□□□□□ -2.02
LIM2P55344 AL670379.8-201ENST00000605353 252 ntBASIC2.45□□□□□ -2.02
LIM2P55344 AL670379.7-201ENST00000605823 252 ntBASIC2.45□□□□□ -2.02
LIM2P55344 AC012360.2-201ENST00000609349 391 ntBASIC2.45□□□□□ -2.02
LIM2P55344 AC138749.5-201ENST00000611461 208 ntBASIC2.45□□□□□ -2.02
LIM2P55344 AL109811.3-202ENST00000612387 651 ntTSL 3 BASIC2.45□□□□□ -2.02
LIM2P55344 AC034102.8-201ENST00000615146 484 ntBASIC2.45□□□□□ -2.02
LIM2P55344 AL161629.2-201ENST00000615347 275 ntBASIC2.45□□□□□ -2.02
LIM2P55344 AC116165.2-201ENST00000616705 206 ntBASIC2.45□□□□□ -2.02
LIM2P55344 AC092140.2-201ENST00000618027 521 ntBASIC2.45□□□□□ -2.02
LIM2P55344 AC068880.5-201ENST00000624331 290 ntBASIC2.45□□□□□ -2.02
LIM2P55344 SATB1-AS1-227ENST00000625533 743 ntTSL 5 BASIC2.45□□□□□ -2.02
LIM2P55344 CAPZA2-214ENST00000628758 525 ntTSL 5 BASIC2.45□□□□□ -2.02
LIM2P55344 AL109837.2-201ENST00000632608 295 ntTSL 3 BASIC2.45□□□□□ -2.02
LIM2P55344 AC092192.1-201ENST00000633154 1018 ntBASIC2.45□□□□□ -2.02
LIM2P55344 AP003399.1-201ENST00000637534 361 ntBASIC2.45□□□□□ -2.02
LIM2P55344 AC010149.2-201ENST00000637608 315 ntBASIC2.45□□□□□ -2.02
LIM2P55344 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC2.45□□□□□ -2.02
LIM2P55344 N4BP2L2-211ENST00000504114 2513 ntTSL 5 BASIC2.45□□□□□ -2.02
LIM2P55344 AL445523.1-201ENST00000451184 1362 ntBASIC2.45□□□□□ -2.02
LIM2P55344 LIPJ-201ENST00000371939 1484 ntAPPRIS P1 TSL 1 (best) BASIC2.45□□□□□ -2.02
LIM2P55344 RNU1-105P-201ENST00000363470 161 ntBASIC2.44□□□□□ -2.02
LIM2P55344 SNORA25.6-201ENST00000364121 118 ntBASIC2.44□□□□□ -2.02
LIM2P55344 RNU6-533P-201ENST00000384144 107 ntBASIC2.44□□□□□ -2.02
LIM2P55344 MIR23A-201ENST00000385245 73 ntBASIC2.44□□□□□ -2.02
LIM2P55344 MIR1289-1-201ENST00000408836 144 ntBASIC2.44□□□□□ -2.02
LIM2P55344 Y_RNA.608-201ENST00000410647 95 ntBASIC2.44□□□□□ -2.02
LIM2P55344 USP9YP13-201ENST00000417797 480 ntBASIC2.44□□□□□ -2.02
LIM2P55344 AC004543.1-201ENST00000418764 369 ntTSL 5 BASIC2.44□□□□□ -2.02
LIM2P55344 ATG3P1-201ENST00000419507 911 ntBASIC2.44□□□□□ -2.02
LIM2P55344 AC099548.1-201ENST00000421443 426 ntBASIC2.44□□□□□ -2.02
LIM2P55344 AC099342.1-201ENST00000446399 1124 ntTSL 3 BASIC2.44□□□□□ -2.02
LIM2P55344 AL133217.1-201ENST00000450980 425 ntBASIC2.44□□□□□ -2.02
LIM2P55344 AL109933.2-201ENST00000452651 260 ntBASIC2.44□□□□□ -2.02
LIM2P55344 ART2BP-201ENST00000453501 499 ntBASIC2.44□□□□□ -2.02
LIM2P55344 SCEL-AS1-201ENST00000456280 493 ntTSL 3 BASIC2.44□□□□□ -2.02
LIM2P55344 snoU13.28-201ENST00000459235 104 ntBASIC2.44□□□□□ -2.02
LIM2P55344 MTND4LP3-201ENST00000468320 276 ntBASIC2.44□□□□□ -2.02
LIM2P55344 AP000797.1-201ENST00000478870 387 ntBASIC2.44□□□□□ -2.02
LIM2P55344 RPF2P2-201ENST00000504693 896 ntBASIC2.44□□□□□ -2.02
LIM2P55344 AC093292.1-201ENST00000505050 449 ntTSL 3 BASIC2.44□□□□□ -2.02
LIM2P55344 CSN1S1-202ENST00000505782 871 ntAPPRIS ALT2 TSL 5 BASIC2.44□□□□□ -2.02
LIM2P55344 AC022616.6-201ENST00000520479 119 ntBASIC2.44□□□□□ -2.02
LIM2P55344 AC091996.1-201ENST00000522274 600 ntTSL 3 BASIC2.44□□□□□ -2.02
LIM2P55344 SUB1P1-201ENST00000524415 382 ntBASIC2.44□□□□□ -2.02
LIM2P55344 CCDC7-208ENST00000537047 657 ntAPPRIS ALT2 TSL 1 (best) BASIC2.44□□□□□ -2.02
LIM2P55344 CCDC7-209ENST00000539197 581 ntAPPRIS ALT2 TSL 1 (best) BASIC2.44□□□□□ -2.02
LIM2P55344 AC243972.3-201ENST00000539655 198 ntBASIC2.44□□□□□ -2.02
LIM2P55344 AP000462.3-201ENST00000545593 330 ntTSL 5 BASIC2.44□□□□□ -2.02
LIM2P55344 LINC02300-201ENST00000549742 665 ntTSL 4 BASIC2.44□□□□□ -2.02
LIM2P55344 MRPS36P5-201ENST00000551909 298 ntBASIC2.44□□□□□ -2.02
LIM2P55344 AC087463.1-201ENST00000568541 556 ntTSL 2 BASIC2.44□□□□□ -2.02
LIM2P55344 LINC01899-202ENST00000583756 575 ntTSL 3 BASIC2.44□□□□□ -2.02
LIM2P55344 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC2.44□□□□□ -2.02
LIM2P55344 DUXAP4-201ENST00000603046 613 ntBASIC2.44□□□□□ -2.02
LIM2P55344 AC107294.1-201ENST00000609524 467 ntBASIC2.44□□□□□ -2.02
LIM2P55344 FTX_3.1-201ENST00000610451 147 ntBASIC2.44□□□□□ -2.02
LIM2P55344 C3orf85-208ENST00000622536 925 ntAPPRIS P5 TSL 5 BASIC2.44□□□□□ -2.02
LIM2P55344 AC092608.2-201ENST00000624427 218 ntBASIC2.44□□□□□ -2.02
LIM2P55344 AMY2B-208ENST00000610648 1736 ntAPPRIS P1 TSL 1 (best) BASIC2.44□□□□□ -2.02
LIM2P55344 TEX9-207ENST00000560582 2005 ntTSL 3 BASIC2.44□□□□□ -2.02
LIM2P55344 AASDH-207ENST00000513376 3241 ntTSL 1 (best) BASIC2.44□□□□□ -2.02
LIM2P55344 AC092104.1-201ENST00000497346 1441 ntBASIC2.43□□□□□ -2.02
LIM2P55344 U8.9-201ENST00000365667 134 ntBASIC2.43□□□□□ -2.02
LIM2P55344 RNU6-809P-201ENST00000384461 107 ntBASIC2.43□□□□□ -2.02
LIM2P55344 RNU6-140P-201ENST00000384566 108 ntBASIC2.43□□□□□ -2.02
LIM2P55344 MIR196B-201ENST00000384852 84 ntBASIC2.43□□□□□ -2.02
LIM2P55344 AL139039.1-201ENST00000401900 692 ntBASIC2.43□□□□□ -2.02
LIM2P55344 RNU6-920P-201ENST00000410926 92 ntBASIC2.43□□□□□ -2.02
LIM2P55344 AC062039.1-201ENST00000414394 565 ntTSL 2 BASIC2.43□□□□□ -2.02
LIM2P55344 LINC00397-201ENST00000422074 344 ntTSL 3 BASIC2.43□□□□□ -2.02
LIM2P55344 AL023581.1-201ENST00000423500 455 ntTSL 2 BASIC2.43□□□□□ -2.02
LIM2P55344 AC007919.1-201ENST00000429380 217 ntBASIC2.43□□□□□ -2.02
LIM2P55344 ARPC3P1-201ENST00000437218 533 ntBASIC2.43□□□□□ -2.02
LIM2P55344 MTND1P30-201ENST00000441241 901 ntBASIC2.43□□□□□ -2.02
LIM2P55344 LINC01828-202ENST00000450294 955 ntTSL 5 BASIC2.43□□□□□ -2.02
LIM2P55344 AP000705.1-201ENST00000454567 350 ntBASIC2.43□□□□□ -2.02
LIM2P55344 LINC01038-201ENST00000457858 428 ntTSL 3 BASIC2.43□□□□□ -2.02
LIM2P55344 RNU7-125P-201ENST00000458760 62 ntBASIC2.43□□□□□ -2.02
LIM2P55344 RPL37P6-201ENST00000460682 294 ntBASIC2.43□□□□□ -2.02
LIM2P55344 MTCO2P29-201ENST00000465212 189 ntBASIC2.43□□□□□ -2.02
LIM2P55344 AC008571.1-201ENST00000467232 300 ntBASIC2.43□□□□□ -2.02
LIM2P55344 RNU6-826P-201ENST00000516827 104 ntBASIC2.43□□□□□ -2.02
LIM2P55344 AC025881.1-201ENST00000518851 512 ntBASIC2.43□□□□□ -2.02
LIM2P55344 AC090136.1-201ENST00000520009 240 ntBASIC2.43□□□□□ -2.02
LIM2P55344 ZFPM2-AS1-204ENST00000520433 748 ntTSL 3 BASIC2.43□□□□□ -2.02
LIM2P55344 AC011979.2-201ENST00000527568 352 ntBASIC2.43□□□□□ -2.02
LIM2P55344 AC004486.1-201ENST00000546846 233 ntBASIC2.43□□□□□ -2.02
LIM2P55344 AC011611.4-201ENST00000547721 779 ntTSL 2 BASIC2.43□□□□□ -2.02
LIM2P55344 AC123904.2-201ENST00000548059 300 ntBASIC2.43□□□□□ -2.02
LIM2P55344 AL161757.2-201ENST00000553800 421 ntTSL 3 BASIC2.43□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 90.4 ms