Protein–RNA interactions for Protein: P55283

CDH4, Cadherin-4, humanhuman

Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH4P55283 RNU6-927P-201ENST00000516199 100 ntBASIC2.39□□□□□ -2.03
CDH4P55283 SNORA31.11-201ENST00000516528 139 ntBASIC2.39□□□□□ -2.03
CDH4P55283 MTCO2P15-201ENST00000532655 656 ntBASIC2.39□□□□□ -2.03
CDH4P55283 G2E3-AS1-202ENST00000550118 609 ntTSL 5 BASIC2.39□□□□□ -2.03
CDH4P55283 AL133153.1-201ENST00000557756 303 ntBASIC2.39□□□□□ -2.03
CDH4P55283 SNORD53-201ENST00000579969 78 ntBASIC2.39□□□□□ -2.03
CDH4P55283 MIR3616-201ENST00000584070 92 ntBASIC2.39□□□□□ -2.03
CDH4P55283 LINC01897-203ENST00000591503 369 ntTSL 2 BASIC2.39□□□□□ -2.03
CDH4P55283 AP000403.1-201ENST00000603349 851 ntBASIC2.39□□□□□ -2.03
CDH4P55283 DPPA3P3-201ENST00000603842 430 ntBASIC2.39□□□□□ -2.03
CDH4P55283 RNU4-5P-201ENST00000607255 135 ntBASIC2.39□□□□□ -2.03
CDH4P55283 AL157392.4-201ENST00000609756 345 ntBASIC2.39□□□□□ -2.03
CDH4P55283 AL591441.2-201ENST00000620059 535 ntTSL 5 BASIC2.39□□□□□ -2.03
CDH4P55283 AP000676.3-201ENST00000623299 569 ntBASIC2.39□□□□□ -2.03
CDH4P55283 AC004520.1-201ENST00000608362 1413 ntBASIC2.39□□□□□ -2.03
CDH4P55283 Z82209.1-201ENST00000422141 2135 ntBASIC2.39□□□□□ -2.03
CDH4P55283 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC2.39□□□□□ -2.03
CDH4P55283 AC007336.1-201ENST00000576365 3828 ntBASIC2.39□□□□□ -2.03
CDH4P55283 CDK1-202ENST00000373809 1613 ntTSL 1 (best) BASIC2.39□□□□□ -2.03
CDH4P55283 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC2.38□□□□□ -2.03
CDH4P55283 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC2.38□□□□□ -2.03
CDH4P55283 ELF2P3-201ENST00000445099 1506 ntBASIC2.38□□□□□ -2.03
CDH4P55283 AGTPBP1-205ENST00000376083 4208 ntAPPRIS P1 TSL 1 (best) BASIC2.38□□□□□ -2.03
CDH4P55283 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC2.38□□□□□ -2.03
CDH4P55283 GSTA3-201ENST00000211122 902 ntAPPRIS P1 TSL 1 (best) BASIC2.38□□□□□ -2.03
CDH4P55283 GNGT1-201ENST00000248572 720 ntAPPRIS P1 TSL 1 (best) BASIC2.38□□□□□ -2.03
CDH4P55283 MIR6073-201ENST00000352083 89 ntBASIC2.38□□□□□ -2.03
CDH4P55283 MEIG1-201ENST00000378240 507 ntAPPRIS P1 TSL 2 BASIC2.38□□□□□ -2.03
CDH4P55283 RNU6-1328P-201ENST00000410938 106 ntBASIC2.38□□□□□ -2.03
CDH4P55283 AL359704.1-201ENST00000411586 781 ntBASIC2.38□□□□□ -2.03
CDH4P55283 AC107081.1-201ENST00000414975 361 ntBASIC2.38□□□□□ -2.03
CDH4P55283 AC093151.3-203ENST00000422305 514 ntTSL 3 BASIC2.38□□□□□ -2.03
CDH4P55283 MTATP6P30-201ENST00000443540 664 ntBASIC2.38□□□□□ -2.03
CDH4P55283 OSTCP8-201ENST00000445117 448 ntBASIC2.38□□□□□ -2.03
CDH4P55283 ELOCP30-201ENST00000447108 299 ntBASIC2.38□□□□□ -2.03
CDH4P55283 AL109763.1-201ENST00000455391 461 ntTSL 2 BASIC2.38□□□□□ -2.03
CDH4P55283 AC013267.1-201ENST00000458227 267 ntBASIC2.38□□□□□ -2.03
CDH4P55283 RBM43P1-201ENST00000476891 1081 ntBASIC2.38□□□□□ -2.03
CDH4P55283 CFLAR-225ENST00000494258 693 ntTSL 3 BASIC2.38□□□□□ -2.03
CDH4P55283 UBE2V1P12-201ENST00000503954 474 ntBASIC2.38□□□□□ -2.03
CDH4P55283 AC008413.1-201ENST00000511864 177 ntBASIC2.38□□□□□ -2.03
CDH4P55283 AC109927.1-202ENST00000511951 282 ntTSL 3 BASIC2.38□□□□□ -2.03
CDH4P55283 AC112673.1-201ENST00000513168 575 ntBASIC2.38□□□□□ -2.03
CDH4P55283 MTCYBP43-201ENST00000513621 740 ntBASIC2.38□□□□□ -2.03
CDH4P55283 RNA5SP216-201ENST00000516111 123 ntBASIC2.38□□□□□ -2.03
CDH4P55283 RNA5SP281-201ENST00000516504 135 ntBASIC2.38□□□□□ -2.03
CDH4P55283 AP003467.2-201ENST00000520175 319 ntBASIC2.38□□□□□ -2.03
CDH4P55283 KLRF2-201ENST00000535540 731 ntAPPRIS P1 TSL 1 (best) BASIC2.38□□□□□ -2.03
CDH4P55283 LINC00944-203ENST00000542248 548 ntTSL 4 BASIC2.38□□□□□ -2.03
CDH4P55283 AC096558.2-201ENST00000546678 506 ntTSL 3 BASIC2.38□□□□□ -2.03
CDH4P55283 AC007115.1-201ENST00000546853 234 ntBASIC2.38□□□□□ -2.03
CDH4P55283 MEG8-218ENST00000556720 456 ntTSL 3 BASIC2.38□□□□□ -2.03
CDH4P55283 AC044798.1-201ENST00000565146 418 ntTSL 5 BASIC2.38□□□□□ -2.03
CDH4P55283 MIR4509-3-201ENST00000578671 94 ntBASIC2.38□□□□□ -2.03
CDH4P55283 MIR4509-2-201ENST00000583920 94 ntBASIC2.38□□□□□ -2.03
CDH4P55283 ZNF573-209ENST00000585724 453 ntTSL 5 BASIC2.38□□□□□ -2.03
CDH4P55283 AC021171.1-201ENST00000603137 706 ntBASIC2.38□□□□□ -2.03
CDH4P55283 AC092953.2-201ENST00000608000 699 ntBASIC2.38□□□□□ -2.03
CDH4P55283 AC004908.2-201ENST00000609090 574 ntBASIC2.38□□□□□ -2.03
CDH4P55283 AC068506.1-202ENST00000613388 545 ntTSL 3 BASIC2.38□□□□□ -2.03
CDH4P55283 HMGB1P24-202ENST00000615653 685 ntBASIC2.38□□□□□ -2.03
CDH4P55283 MIR4509-1-201ENST00000618224 94 ntBASIC2.38□□□□□ -2.03
CDH4P55283 OR4C16-201ENST00000623907 933 ntAPPRIS P1 BASIC2.38□□□□□ -2.03
CDH4P55283 AL137003.2-201ENST00000606924 2538 ntBASIC2.38□□□□□ -2.03
CDH4P55283 AC080128.1-201ENST00000474389 1917 ntBASIC2.38□□□□□ -2.03
CDH4P55283 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC2.38□□□□□ -2.03
CDH4P55283 ARHGAP5-202ENST00000345122 9604 ntAPPRIS P3 TSL 5 BASIC2.38□□□□□ -2.03
CDH4P55283 AC010889.1-201ENST00000566193 2666 ntBASIC2.37□□□□□ -2.03
CDH4P55283 AC006020.1-201ENST00000420179 1854 ntBASIC2.37□□□□□ -2.03
CDH4P55283 RNU6-462P-201ENST00000362659 105 ntBASIC2.37□□□□□ -2.03
CDH4P55283 RPAP3-202ENST00000380650 2149 ntTSL 1 (best) BASIC2.37□□□□□ -2.03
CDH4P55283 RNU6-1242P-201ENST00000391052 103 ntBASIC2.37□□□□□ -2.03
CDH4P55283 NDUFS5P4-201ENST00000412983 318 ntBASIC2.37□□□□□ -2.03
CDH4P55283 AC093157.2-201ENST00000414686 671 ntTSL 5 BASIC2.37□□□□□ -2.03
CDH4P55283 AC096649.2-201ENST00000416186 393 ntBASIC2.37□□□□□ -2.03
CDH4P55283 USP9YP26-201ENST00000421008 661 ntBASIC2.37□□□□□ -2.03
CDH4P55283 MTCO2P23-201ENST00000425216 680 ntBASIC2.37□□□□□ -2.03
CDH4P55283 ELOCP14-201ENST00000428070 331 ntBASIC2.37□□□□□ -2.03
CDH4P55283 GYPB-201ENST00000429670 239 ntTSL 1 (best) BASIC2.37□□□□□ -2.03
CDH4P55283 AC244035.1-201ENST00000430042 390 ntBASIC2.37□□□□□ -2.03
CDH4P55283 RPS15AP28-201ENST00000435088 386 ntBASIC2.37□□□□□ -2.03
CDH4P55283 AC091133.1-201ENST00000435491 483 ntTSL 3 BASIC2.37□□□□□ -2.03
CDH4P55283 MTND1P28-201ENST00000435623 950 ntBASIC2.37□□□□□ -2.03
CDH4P55283 ELOCP7-201ENST00000439968 331 ntBASIC2.37□□□□□ -2.03
CDH4P55283 AC004854.1-201ENST00000440356 349 ntBASIC2.37□□□□□ -2.03
CDH4P55283 AC006458.1-201ENST00000445093 653 ntTSL 3 BASIC2.37□□□□□ -2.03
CDH4P55283 AL354994.1-201ENST00000445967 194 ntTSL 5 BASIC2.37□□□□□ -2.03
CDH4P55283 AC011753.1-201ENST00000451001 220 ntBASIC2.37□□□□□ -2.03
CDH4P55283 AL121769.1-201ENST00000469473 401 ntBASIC2.37□□□□□ -2.03
CDH4P55283 C1orf112-206ENST00000472795 925 ntAPPRIS ALT2 TSL 2 BASIC2.37□□□□□ -2.03
CDH4P55283 RPL7P18-201ENST00000478965 734 ntBASIC2.37□□□□□ -2.03
CDH4P55283 AC093809.1-201ENST00000509155 340 ntBASIC2.37□□□□□ -2.03
CDH4P55283 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC2.37□□□□□ -2.03
CDH4P55283 AC022447.1-201ENST00000515358 464 ntBASIC2.37□□□□□ -2.03
CDH4P55283 AC092746.1-201ENST00000542819 562 ntTSL 4 BASIC2.37□□□□□ -2.03
CDH4P55283 AC093012.1-202ENST00000549403 582 ntBASIC2.37□□□□□ -2.03
CDH4P55283 AC009063.1-201ENST00000563342 702 ntBASIC2.37□□□□□ -2.03
CDH4P55283 AC024619.4-201ENST00000580924 316 ntBASIC2.37□□□□□ -2.03
CDH4P55283 TCF4-AS2-201ENST00000586467 445 ntTSL 2 BASIC2.37□□□□□ -2.03
CDH4P55283 AC080013.3-201ENST00000606839 578 ntBASIC2.37□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 142.3 ms