Protein–RNA interactions for Protein: P54868

HMGCS2, Hydroxymethylglutaryl-CoA synthase, mitochondrial, humanhuman

Predictions only

Length 508 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS2P54868 AL138880.2-201ENST00000616214 239 ntBASIC2.79□□□□□ -1.96
HMGCS2P54868 AL591441.2-201ENST00000620059 535 ntTSL 5 BASIC2.79□□□□□ -1.96
HMGCS2P54868 AC079597.1-201ENST00000624306 508 ntBASIC2.79□□□□□ -1.96
HMGCS2P54868 MIR1291-201ENST00000627649 87 ntBASIC2.79□□□□□ -1.96
HMGCS2P54868 CD44-239ENST00000639002 528 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
HMGCS2P54868 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
HMGCS2P54868 ANKRD18EP-201ENST00000405487 2632 ntBASIC2.79□□□□□ -1.96
HMGCS2P54868 TRIQK-212ENST00000520686 1808 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
HMGCS2P54868 ZCCHC10-201ENST00000324170 2178 ntAPPRIS P3 TSL 1 (best) BASIC2.78□□□□□ -1.96
HMGCS2P54868 AC009902.3-201ENST00000606235 2172 ntBASIC2.78□□□□□ -1.96
HMGCS2P54868 FAM35CP-201ENST00000554755 2470 ntBASIC2.78□□□□□ -1.96
HMGCS2P54868 RNU1-91P-201ENST00000364746 163 ntBASIC2.78□□□□□ -1.96
HMGCS2P54868 MIR493-201ENST00000385254 89 ntBASIC2.78□□□□□ -1.96
HMGCS2P54868 RNU6-882P-201ENST00000391025 103 ntBASIC2.78□□□□□ -1.96
HMGCS2P54868 AL136372.1-201ENST00000403060 228 ntBASIC2.78□□□□□ -1.96
HMGCS2P54868 RNU4-26P-201ENST00000410270 107 ntBASIC2.78□□□□□ -1.96
HMGCS2P54868 AL359704.1-201ENST00000411586 781 ntBASIC2.78□□□□□ -1.96
HMGCS2P54868 AC078974.1-201ENST00000411597 223 ntBASIC2.78□□□□□ -1.96
HMGCS2P54868 LINC00397-201ENST00000422074 344 ntTSL 3 BASIC2.78□□□□□ -1.96
HMGCS2P54868 AL023581.1-201ENST00000423500 455 ntTSL 2 BASIC2.78□□□□□ -1.96
HMGCS2P54868 AL391336.1-201ENST00000424678 484 ntTSL 3 BASIC2.78□□□□□ -1.96
HMGCS2P54868 MED14P1-201ENST00000430517 648 ntBASIC2.78□□□□□ -1.96
HMGCS2P54868 OR4K11P-201ENST00000431829 904 ntBASIC2.78□□□□□ -1.96
HMGCS2P54868 AC093019.2-201ENST00000432294 384 ntTSL 3 BASIC2.78□□□□□ -1.96
HMGCS2P54868 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC2.78□□□□□ -1.96
HMGCS2P54868 TAF9P1-201ENST00000445421 515 ntBASIC2.78□□□□□ -1.96
HMGCS2P54868 COX6CP12-201ENST00000446748 202 ntBASIC2.78□□□□□ -1.96
HMGCS2P54868 ST13P20-201ENST00000447996 1065 ntBASIC2.78□□□□□ -1.96
HMGCS2P54868 TAF9P2-201ENST00000454958 515 ntBASIC2.78□□□□□ -1.96
HMGCS2P54868 GPX5-203ENST00000469384 428 ntTSL 1 (best) BASIC2.78□□□□□ -1.96
HMGCS2P54868 AC126182.1-201ENST00000478134 357 ntBASIC2.78□□□□□ -1.96
HMGCS2P54868 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC2.78□□□□□ -1.96
HMGCS2P54868 RN7SL283P-201ENST00000489055 303 ntBASIC2.78□□□□□ -1.96
HMGCS2P54868 AL139147.1-201ENST00000502413 1156 ntTSL 2 BASIC2.78□□□□□ -1.96
HMGCS2P54868 CBX3P3-201ENST00000508108 532 ntBASIC2.78□□□□□ -1.96
HMGCS2P54868 RNU6-1003P-201ENST00000517099 105 ntBASIC2.78□□□□□ -1.96
HMGCS2P54868 AC022360.2-202ENST00000517308 407 ntTSL 3 BASIC2.78□□□□□ -1.96
HMGCS2P54868 AC092745.2-201ENST00000537764 620 ntTSL 3 BASIC2.78□□□□□ -1.96
HMGCS2P54868 AC022509.2-201ENST00000540392 699 ntTSL 3 BASIC2.78□□□□□ -1.96
HMGCS2P54868 OR4H12P-201ENST00000556269 907 ntBASIC2.78□□□□□ -1.96
HMGCS2P54868 PSMA4-204ENST00000558094 651 ntTSL 3 BASIC2.78□□□□□ -1.96
HMGCS2P54868 AC009163.5-201ENST00000575421 637 ntBASIC2.78□□□□□ -1.96
HMGCS2P54868 MIR5697-201ENST00000578045 78 ntBASIC2.78□□□□□ -1.96
HMGCS2P54868 MIR5092-201ENST00000583139 88 ntBASIC2.78□□□□□ -1.96
HMGCS2P54868 AC022335.1-204ENST00000590779 600 ntAPPRIS ALT2 TSL 2 BASIC2.78□□□□□ -1.96
HMGCS2P54868 AP001429.1-201ENST00000602568 530 ntBASIC2.78□□□□□ -1.96
HMGCS2P54868 AP001981.2-201ENST00000603241 418 ntBASIC2.78□□□□□ -1.96
HMGCS2P54868 AC011451.2-201ENST00000604303 598 ntBASIC2.78□□□□□ -1.96
HMGCS2P54868 AC012443.1-201ENST00000605605 231 ntBASIC2.78□□□□□ -1.96
HMGCS2P54868 AC048344.4-201ENST00000619744 527 ntBASIC2.78□□□□□ -1.96
HMGCS2P54868 PIGX-211ENST00000639474 777 ntAPPRIS P3 TSL 1 (best) BASIC2.78□□□□□ -1.96
HMGCS2P54868 MTND5P6-201ENST00000422338 1798 ntBASIC2.78□□□□□ -1.96
HMGCS2P54868 HELLS-201ENST00000239026 2740 ntTSL 5 BASIC2.78□□□□□ -1.96
HMGCS2P54868 EXOC6-203ENST00000371552 3564 ntTSL 5 BASIC2.78□□□□□ -1.96
HMGCS2P54868 ELL2P3-201ENST00000457883 1602 ntBASIC2.78□□□□□ -1.96
HMGCS2P54868 C1orf141-202ENST00000371006 2053 ntAPPRIS P3 TSL 2 BASIC2.78□□□□□ -1.96
HMGCS2P54868 ATP2B1-201ENST00000261173 6777 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.97
HMGCS2P54868 P2RY12-201ENST00000302632 1766 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
HMGCS2P54868 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC2.77□□□□□ -1.97
HMGCS2P54868 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
HMGCS2P54868 Y_RNA.46-201ENST00000362695 102 ntBASIC2.77□□□□□ -1.97
HMGCS2P54868 CD24P4-201ENST00000382840 243 ntBASIC2.77□□□□□ -1.97
HMGCS2P54868 U3.20-201ENST00000390909 217 ntBASIC2.77□□□□□ -1.97
HMGCS2P54868 ZNF705D-201ENST00000400078 925 ntAPPRIS P1 TSL 2 BASIC2.77□□□□□ -1.97
HMGCS2P54868 RPS20P2-201ENST00000402520 389 ntBASIC2.77□□□□□ -1.97
HMGCS2P54868 CCNG1P1-201ENST00000406783 885 ntBASIC2.77□□□□□ -1.97
HMGCS2P54868 MYO16-AS2-201ENST00000412809 436 ntTSL 3 BASIC2.77□□□□□ -1.97
HMGCS2P54868 SPATA17-AS1-201ENST00000415765 420 ntTSL 5 BASIC2.77□□□□□ -1.97
HMGCS2P54868 AL589765.2-201ENST00000420382 424 ntTSL 3 BASIC2.77□□□□□ -1.97
HMGCS2P54868 AC129850.1-201ENST00000436203 508 ntBASIC2.77□□□□□ -1.97
HMGCS2P54868 AL163192.1-201ENST00000448858 708 ntTSL 5 BASIC2.77□□□□□ -1.97
HMGCS2P54868 Y_RNA.638-201ENST00000459374 113 ntBASIC2.77□□□□□ -1.97
HMGCS2P54868 AP000797.1-201ENST00000478870 387 ntBASIC2.77□□□□□ -1.97
HMGCS2P54868 AC117532.1-201ENST00000514638 323 ntBASIC2.77□□□□□ -1.97
HMGCS2P54868 AC116347.2-201ENST00000514912 523 ntBASIC2.77□□□□□ -1.97
HMGCS2P54868 AC025881.1-201ENST00000518851 512 ntBASIC2.77□□□□□ -1.97
HMGCS2P54868 AC239802.1-201ENST00000531288 406 ntTSL 5 BASIC2.77□□□□□ -1.97
HMGCS2P54868 ZDHHC20P3-201ENST00000531576 336 ntBASIC2.77□□□□□ -1.97
HMGCS2P54868 AC106796.1-201ENST00000577173 615 ntTSL 3 BASIC2.77□□□□□ -1.97
HMGCS2P54868 MIR4506-201ENST00000584693 77 ntBASIC2.77□□□□□ -1.97
HMGCS2P54868 ABBA01006766.1-201ENST00000584728 294 ntBASIC2.77□□□□□ -1.97
HMGCS2P54868 MIR548AB-201ENST00000584917 84 ntBASIC2.77□□□□□ -1.97
HMGCS2P54868 AL590229.1-201ENST00000603497 542 ntBASIC2.77□□□□□ -1.97
HMGCS2P54868 AL022099.1-201ENST00000604551 712 ntBASIC2.77□□□□□ -1.97
HMGCS2P54868 AC080013.6-201ENST00000606185 215 ntBASIC2.77□□□□□ -1.97
HMGCS2P54868 AL158211.4-201ENST00000606988 584 ntBASIC2.77□□□□□ -1.97
HMGCS2P54868 AL355472.4-201ENST00000610233 626 ntBASIC2.77□□□□□ -1.97
HMGCS2P54868 AC027807.2-201ENST00000616099 408 ntBASIC2.77□□□□□ -1.97
HMGCS2P54868 Z69908.1-201ENST00000622603 247 ntBASIC2.77□□□□□ -1.97
HMGCS2P54868 AC093591.3-201ENST00000634516 308 ntBASIC2.77□□□□□ -1.97
HMGCS2P54868 API5P2-201ENST00000397055 1498 ntBASIC2.77□□□□□ -1.97
HMGCS2P54868 RNF128-202ENST00000324342 2654 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
HMGCS2P54868 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC2.76□□□□□ -1.97
HMGCS2P54868 MTND4P4-201ENST00000439033 1366 ntBASIC2.76□□□□□ -1.97
HMGCS2P54868 MAPK10-266ENST00000641066 6555 ntBASIC2.76□□□□□ -1.97
HMGCS2P54868 ANKAR-209ENST00000520309 4410 ntAPPRIS P1 TSL 5 BASIC2.76□□□□□ -1.97
HMGCS2P54868 U3.4-201ENST00000363352 213 ntBASIC2.76□□□□□ -1.97
HMGCS2P54868 RNU6-799P-201ENST00000363567 107 ntBASIC2.76□□□□□ -1.97
HMGCS2P54868 RNA5SP139-201ENST00000364340 117 ntBASIC2.76□□□□□ -1.97
HMGCS2P54868 SNORD116-9-201ENST00000384000 95 ntBASIC2.76□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 84.2 ms