Protein–RNA interactions for Protein: P54253

ATXN1, Ataxin-1, humanhuman

Known RBP Predictions only

Length 815 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN1P54253 RNU6-1304P-201ENST00000411374 106 ntBASIC4.1□□□□□ -1.75
ATXN1P54253 AC096664.2-201ENST00000411843 406 ntBASIC4.1□□□□□ -1.75
ATXN1P54253 LHFPL3-AS1-203ENST00000417290 950 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
ATXN1P54253 MTATP6P18-201ENST00000417994 673 ntBASIC4.1□□□□□ -1.75
ATXN1P54253 BX005214.1-201ENST00000427327 476 ntTSL 5 BASIC4.1□□□□□ -1.75
ATXN1P54253 FTH1P1-201ENST00000437933 532 ntBASIC4.1□□□□□ -1.75
ATXN1P54253 GTF2IP13-201ENST00000438487 386 ntBASIC4.1□□□□□ -1.75
ATXN1P54253 HMGB3P12-201ENST00000438745 556 ntBASIC4.1□□□□□ -1.75
ATXN1P54253 AC083863.1-201ENST00000438811 231 ntBASIC4.1□□□□□ -1.75
ATXN1P54253 AC018816.1-203ENST00000441894 338 ntTSL 3 BASIC4.1□□□□□ -1.75
ATXN1P54253 MTCO3P10-201ENST00000455912 772 ntBASIC4.1□□□□□ -1.75
ATXN1P54253 SNORD121B-201ENST00000458838 81 ntBASIC4.1□□□□□ -1.75
ATXN1P54253 RN7SL293P-201ENST00000481765 281 ntBASIC4.1□□□□□ -1.75
ATXN1P54253 APOA2-210ENST00000491350 263 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
ATXN1P54253 AC092666.1-202ENST00000493400 442 ntTSL 2 BASIC4.1□□□□□ -1.75
ATXN1P54253 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC4.1□□□□□ -1.75
ATXN1P54253 LINC01256-201ENST00000513270 508 ntTSL 2 BASIC4.1□□□□□ -1.75
ATXN1P54253 RNU6-1095P-201ENST00000516148 108 ntBASIC4.1□□□□□ -1.75
ATXN1P54253 RNU6-1281P-201ENST00000516223 105 ntBASIC4.1□□□□□ -1.75
ATXN1P54253 RNU6-352P-201ENST00000516908 107 ntBASIC4.1□□□□□ -1.75
ATXN1P54253 RNA5SP337-201ENST00000517007 109 ntBASIC4.1□□□□□ -1.75
ATXN1P54253 AC011257.1-201ENST00000519048 281 ntTSL 3 BASIC4.1□□□□□ -1.75
ATXN1P54253 DEFB130C-201ENST00000528518 237 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
ATXN1P54253 AC092120.1-201ENST00000562211 420 ntTSL 3 BASIC4.1□□□□□ -1.75
ATXN1P54253 MYL12BP1-201ENST00000569826 507 ntBASIC4.1□□□□□ -1.75
ATXN1P54253 MIR3910-1-201ENST00000580936 111 ntBASIC4.1□□□□□ -1.75
ATXN1P54253 AC022601.1-201ENST00000596954 577 ntTSL 4 BASIC4.1□□□□□ -1.75
ATXN1P54253 LINC00310-206ENST00000609947 892 ntTSL 5 BASIC4.1□□□□□ -1.75
ATXN1P54253 DLX6-AS1_2.1-201ENST00000613701 207 ntBASIC4.1□□□□□ -1.75
ATXN1P54253 AL590491.2-201ENST00000614608 499 ntTSL 5 BASIC4.1□□□□□ -1.75
ATXN1P54253 SRP54-214ENST00000630962 162 ntTSL 5 BASIC4.1□□□□□ -1.75
ATXN1P54253 SLC6A15-203ENST00000450363 4229 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
ATXN1P54253 THEMIS-205ENST00000626040 3179 ntAPPRIS ALT2 TSL 2 BASIC4.1□□□□□ -1.75
ATXN1P54253 SPAG17-201ENST00000336338 6924 ntAPPRIS P2 TSL 1 (best) BASIC4.09□□□□□ -1.75
ATXN1P54253 MTND5P7-201ENST00000413558 1798 ntBASIC4.09□□□□□ -1.75
ATXN1P54253 AC004944.1-201ENST00000517807 3059 ntBASIC4.09□□□□□ -1.75
ATXN1P54253 MUC15-205ENST00000529533 2084 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
ATXN1P54253 AF127577.6-201ENST00000623352 2191 ntBASIC4.09□□□□□ -1.75
ATXN1P54253 OR10J1-203ENST00000642080 3503 ntAPPRIS P1 BASIC4.09□□□□□ -1.75
ATXN1P54253 LINC01592-202ENST00000518540 2367 ntTSL 2 BASIC4.09□□□□□ -1.75
ATXN1P54253 RNU6-50P-201ENST00000362356 103 ntBASIC4.09□□□□□ -1.75
ATXN1P54253 SNORD116-29-201ENST00000384516 83 ntBASIC4.09□□□□□ -1.75
ATXN1P54253 RPL7P60-201ENST00000397636 735 ntBASIC4.09□□□□□ -1.75
ATXN1P54253 RNA5SP129-201ENST00000410276 118 ntBASIC4.09□□□□□ -1.75
ATXN1P54253 RPS29P4-201ENST00000414733 161 ntBASIC4.09□□□□□ -1.75
ATXN1P54253 SYF2P2-201ENST00000417620 583 ntBASIC4.09□□□□□ -1.75
ATXN1P54253 AC137499.1-201ENST00000427602 88 ntBASIC4.09□□□□□ -1.75
ATXN1P54253 TIMM9P1-201ENST00000436122 256 ntBASIC4.09□□□□□ -1.75
ATXN1P54253 RPL7P54-201ENST00000438336 674 ntBASIC4.09□□□□□ -1.75
ATXN1P54253 RAC1P7-201ENST00000445367 377 ntBASIC4.09□□□□□ -1.75
ATXN1P54253 PCMTD1P1-201ENST00000455560 355 ntBASIC4.09□□□□□ -1.75
ATXN1P54253 RN7SL271P-201ENST00000487601 295 ntBASIC4.09□□□□□ -1.75
ATXN1P54253 UBE2Q2P9-201ENST00000490086 202 ntBASIC4.09□□□□□ -1.75
ATXN1P54253 MLLT10P2-201ENST00000506434 249 ntBASIC4.09□□□□□ -1.75
ATXN1P54253 NDUFB4P9-201ENST00000511646 388 ntBASIC4.09□□□□□ -1.75
ATXN1P54253 GYPA-208ENST00000512064 441 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
ATXN1P54253 SNORA19.2-201ENST00000516013 114 ntBASIC4.09□□□□□ -1.75
ATXN1P54253 AC114550.2-201ENST00000524008 397 ntTSL 3 BASIC4.09□□□□□ -1.75
ATXN1P54253 LINCR-0001-203ENST00000524047 545 ntTSL 4 BASIC4.09□□□□□ -1.75
ATXN1P54253 AC100768.1-201ENST00000525512 506 ntTSL 3 BASIC4.09□□□□□ -1.75
ATXN1P54253 COPS8P3-201ENST00000526024 482 ntBASIC4.09□□□□□ -1.75
ATXN1P54253 SETP7-201ENST00000552169 453 ntBASIC4.09□□□□□ -1.75
ATXN1P54253 AL161670.1-201ENST00000554348 137 ntBASIC4.09□□□□□ -1.75
ATXN1P54253 AP005271.1-201ENST00000582470 412 ntTSL 3 BASIC4.09□□□□□ -1.75
ATXN1P54253 AC025946.2-201ENST00000603398 234 ntBASIC4.09□□□□□ -1.75
ATXN1P54253 AL139395.1-201ENST00000603662 160 ntBASIC4.09□□□□□ -1.75
ATXN1P54253 AL592436.1-201ENST00000605135 558 ntBASIC4.09□□□□□ -1.75
ATXN1P54253 AL591424.2-201ENST00000617023 128 ntBASIC4.09□□□□□ -1.75
ATXN1P54253 AL356585.4-201ENST00000623078 1229 ntBASIC4.09□□□□□ -1.75
ATXN1P54253 AC009161.2-201ENST00000624626 138 ntBASIC4.09□□□□□ -1.75
ATXN1P54253 CNOT4-202ENST00000356162 2594 ntTSL 5 BASIC4.09□□□□□ -1.75
ATXN1P54253 ATP13A3-203ENST00000439040 7720 ntAPPRIS P1 TSL 5 BASIC4.09□□□□□ -1.75
ATXN1P54253 F8-202ENST00000360256 9059 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
ATXN1P54253 OTUD6B-AS1-201ENST00000522817 4275 ntTSL 2 BASIC4.09□□□□□ -1.75
ATXN1P54253 MBNL1-211ENST00000463374 5092 ntAPPRIS P4 TSL 1 (best) BASIC4.09□□□□□ -1.76
ATXN1P54253 NR3C1-202ENST00000343796 7286 ntAPPRIS P3 TSL 5 BASIC4.09□□□□□ -1.76
ATXN1P54253 KCNJ16-209ENST00000589377 3684 ntAPPRIS P1 TSL 5 BASIC4.09□□□□□ -1.76
ATXN1P54253 PUS7L-207ENST00000551923 3313 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
ATXN1P54253 MTUS1-228ENST00000544260 3650 ntTSL 2 BASIC4.08□□□□□ -1.76
ATXN1P54253 GCSAML-203ENST00000366491 4130 ntAPPRIS ALT2 TSL 2 BASIC4.08□□□□□ -1.76
ATXN1P54253 RNU6-451P-201ENST00000362921 107 ntBASIC4.08□□□□□ -1.76
ATXN1P54253 RNU5A-8P-201ENST00000364102 114 ntBASIC4.08□□□□□ -1.76
ATXN1P54253 RNU6-1322P-201ENST00000364309 107 ntBASIC4.08□□□□□ -1.76
ATXN1P54253 RNU6-169P-201ENST00000365336 107 ntBASIC4.08□□□□□ -1.76
ATXN1P54253 SET-203ENST00000372688 801 ntTSL 2 BASIC4.08□□□□□ -1.76
ATXN1P54253 MEIG1-201ENST00000378240 507 ntAPPRIS P1 TSL 2 BASIC4.08□□□□□ -1.76
ATXN1P54253 RNU1-39P-201ENST00000383897 165 ntBASIC4.08□□□□□ -1.76
ATXN1P54253 Y_RNA.557-201ENST00000384680 107 ntBASIC4.08□□□□□ -1.76
ATXN1P54253 U8.11-201ENST00000384699 133 ntBASIC4.08□□□□□ -1.76
ATXN1P54253 U8.12-201ENST00000384701 133 ntBASIC4.08□□□□□ -1.76
ATXN1P54253 TRAJ32-201ENST00000390505 66 ntAPPRIS P1 BASIC4.08□□□□□ -1.76
ATXN1P54253 HMGB3P2-201ENST00000411913 584 ntBASIC4.08□□□□□ -1.76
ATXN1P54253 RPL7AP73-201ENST00000413490 353 ntBASIC4.08□□□□□ -1.76
ATXN1P54253 AL137014.1-201ENST00000420490 1226 ntBASIC4.08□□□□□ -1.76
ATXN1P54253 AL606753.1-201ENST00000427435 87 ntBASIC4.08□□□□□ -1.76
ATXN1P54253 GPR143P-201ENST00000434155 205 ntBASIC4.08□□□□□ -1.76
ATXN1P54253 HMGB1P37-201ENST00000439613 609 ntBASIC4.08□□□□□ -1.76
ATXN1P54253 AC093156.1-201ENST00000440382 670 ntBASIC4.08□□□□□ -1.76
ATXN1P54253 GPC6-AS2-201ENST00000445540 587 ntTSL 5 BASIC4.08□□□□□ -1.76
ATXN1P54253 RPS17P13-201ENST00000448974 407 ntBASIC4.08□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 130.4 ms