Protein–RNA interactions for Protein: P51956

NEK3, Serine/threonine-protein kinase Nek3, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3P51956 TRAV26-1-201ENST00000390455 537 ntAPPRIS P1 BASIC3.74□□□□□ -1.81
NEK3P51956 TRAV40-201ENST00000390467 317 ntAPPRIS P1 BASIC3.74□□□□□ -1.81
NEK3P51956 MDM2-208ENST00000393410 732 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
NEK3P51956 RNU2-9P-201ENST00000410194 145 ntBASIC3.74□□□□□ -1.81
NEK3P51956 RNU2-29P-201ENST00000410423 189 ntBASIC3.74□□□□□ -1.81
NEK3P51956 RNU4-46P-201ENST00000410818 138 ntBASIC3.74□□□□□ -1.81
NEK3P51956 OR6C66P-201ENST00000414917 930 ntBASIC3.74□□□□□ -1.81
NEK3P51956 AL590705.3-201ENST00000416066 474 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
NEK3P51956 AL158156.1-201ENST00000422509 473 ntBASIC3.74□□□□□ -1.81
NEK3P51956 RPS15AP9-201ENST00000439856 381 ntBASIC3.74□□□□□ -1.81
NEK3P51956 AC104688.1-201ENST00000447158 419 ntTSL 3 BASIC3.74□□□□□ -1.81
NEK3P51956 AC008264.1-201ENST00000447612 367 ntBASIC3.74□□□□□ -1.81
NEK3P51956 MTND1P18-201ENST00000448191 573 ntBASIC3.74□□□□□ -1.81
NEK3P51956 RPS3AP46-201ENST00000448352 682 ntBASIC3.74□□□□□ -1.81
NEK3P51956 NRG3-AS1-201ENST00000448936 555 ntTSL 2 BASIC3.74□□□□□ -1.81
NEK3P51956 AL392046.1-203ENST00000450106 651 ntTSL 2 BASIC3.74□□□□□ -1.81
NEK3P51956 LINC00395-202ENST00000451570 415 ntTSL 3 BASIC3.74□□□□□ -1.81
NEK3P51956 AC069549.1-201ENST00000451584 499 ntTSL 3 BASIC3.74□□□□□ -1.81
NEK3P51956 RPL26P9-201ENST00000457466 433 ntBASIC3.74□□□□□ -1.81
NEK3P51956 SRRM1P2-201ENST00000464531 1192 ntBASIC3.74□□□□□ -1.81
NEK3P51956 RPL7L1P8-201ENST00000469911 741 ntBASIC3.74□□□□□ -1.81
NEK3P51956 AC117522.3-201ENST00000507974 584 ntBASIC3.74□□□□□ -1.81
NEK3P51956 CSN1S2AP-204ENST00000512167 671 ntTSL 3 BASIC3.74□□□□□ -1.81
NEK3P51956 RNU6-703P-201ENST00000516946 107 ntBASIC3.74□□□□□ -1.81
NEK3P51956 C14orf105-204ENST00000526336 598 ntTSL 4 BASIC3.74□□□□□ -1.81
NEK3P51956 AC008945.2-201ENST00000606056 604 ntBASIC3.74□□□□□ -1.81
NEK3P51956 AMY2B-208ENST00000610648 1736 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
NEK3P51956 U4.5-201ENST00000617137 123 ntBASIC3.74□□□□□ -1.81
NEK3P51956 AC139792.3-201ENST00000623525 224 ntBASIC3.74□□□□□ -1.81
NEK3P51956 TEX41-300ENST00000631048 69 ntTSL 5 BASIC3.74□□□□□ -1.81
NEK3P51956 ATM-228ENST00000639240 498 ntTSL 5 BASIC3.74□□□□□ -1.81
NEK3P51956 ATM-230ENST00000640388 578 ntTSL 5 BASIC3.74□□□□□ -1.81
NEK3P51956 NDST3-201ENST00000296499 5961 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
NEK3P51956 MAP3K7-202ENST00000369325 4633 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
NEK3P51956 NXPE1-204ENST00000536271 2289 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
NEK3P51956 SRP72P2-201ENST00000344851 1979 ntBASIC3.74□□□□□ -1.81
NEK3P51956 ATXN3-248ENST00000558190 26812 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
NEK3P51956 MUC7-202ENST00000413702 2540 ntAPPRIS P2 TSL 4 BASIC3.74□□□□□ -1.81
NEK3P51956 HTR2B-201ENST00000258400 2246 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
NEK3P51956 GLCE-202ENST00000559420 4840 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
NEK3P51956 KCNIP4-207ENST00000509207 1301 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
NEK3P51956 MBD5-212ENST00000627651 5610 ntTSL 5 BASIC3.73□□□□□ -1.81
NEK3P51956 FOXP2-224ENST00000635534 4290 ntTSL 5 BASIC3.73□□□□□ -1.81
NEK3P51956 Y_RNA.33-201ENST00000362591 102 ntBASIC3.73□□□□□ -1.81
NEK3P51956 RNU6-1287P-201ENST00000362914 107 ntBASIC3.73□□□□□ -1.81
NEK3P51956 RNU6-1085P-201ENST00000363576 107 ntBASIC3.73□□□□□ -1.81
NEK3P51956 RNA5SP51-201ENST00000364750 119 ntBASIC3.73□□□□□ -1.81
NEK3P51956 AKAP14-203ENST00000371425 793 ntAPPRIS ALT2 TSL 5 BASIC3.73□□□□□ -1.81
NEK3P51956 RNU1-73P-201ENST00000383971 164 ntBASIC3.73□□□□□ -1.81
NEK3P51956 RNU6-1060P-201ENST00000384664 107 ntBASIC3.73□□□□□ -1.81
NEK3P51956 ATP5A1P2-201ENST00000412323 255 ntBASIC3.73□□□□□ -1.81
NEK3P51956 SYF2P2-201ENST00000417620 583 ntBASIC3.73□□□□□ -1.81
NEK3P51956 AL355989.1-202ENST00000419406 408 ntTSL 3 BASIC3.73□□□□□ -1.81
NEK3P51956 NAALADL2-AS1-201ENST00000426315 804 ntTSL 5 BASIC3.73□□□□□ -1.81
NEK3P51956 AL592466.1-201ENST00000428346 307 ntTSL 5 BASIC3.73□□□□□ -1.81
NEK3P51956 AL589986.2-201ENST00000429352 397 ntTSL 2 BASIC3.73□□□□□ -1.81
NEK3P51956 GYPB-201ENST00000429670 239 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
NEK3P51956 AC091286.1-201ENST00000431233 461 ntBASIC3.73□□□□□ -1.81
NEK3P51956 CXorf51B-201ENST00000438525 436 ntAPPRIS P1 TSL 2 BASIC3.73□□□□□ -1.81
NEK3P51956 IGKV3D-7-201ENST00000443397 384 ntAPPRIS P1 BASIC3.73□□□□□ -1.81
NEK3P51956 AL358232.1-201ENST00000448030 501 ntBASIC3.73□□□□□ -1.81
NEK3P51956 ELOCP23-201ENST00000452014 332 ntBASIC3.73□□□□□ -1.81
NEK3P51956 AL441989.1-201ENST00000454204 382 ntTSL 3 BASIC3.73□□□□□ -1.81
NEK3P51956 AL136097.1-201ENST00000456945 913 ntBASIC3.73□□□□□ -1.81
NEK3P51956 RN7SL330P-201ENST00000469709 307 ntBASIC3.73□□□□□ -1.81
NEK3P51956 AC126182.1-201ENST00000478134 357 ntBASIC3.73□□□□□ -1.81
NEK3P51956 SUMO2P6-201ENST00000505273 288 ntBASIC3.73□□□□□ -1.81
NEK3P51956 AC104619.4-201ENST00000510773 249 ntBASIC3.73□□□□□ -1.81
NEK3P51956 ABCA17P-206ENST00000512848 467 ntTSL 2 BASIC3.73□□□□□ -1.81
NEK3P51956 SUB1P1-201ENST00000524415 382 ntBASIC3.73□□□□□ -1.81
NEK3P51956 RGS5-206ENST00000527988 373 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
NEK3P51956 AC078962.4-201ENST00000546135 254 ntTSL 3 BASIC3.73□□□□□ -1.81
NEK3P51956 LINC02309-201ENST00000553679 207 ntTSL 3 BASIC3.73□□□□□ -1.81
NEK3P51956 AC023510.1-201ENST00000555862 490 ntTSL 2 BASIC3.73□□□□□ -1.81
NEK3P51956 AC009269.4-201ENST00000557828 440 ntTSL 3 BASIC3.73□□□□□ -1.81
NEK3P51956 AC009137.1-201ENST00000562790 260 ntTSL 3 BASIC3.73□□□□□ -1.81
NEK3P51956 MIR4703-201ENST00000577728 79 ntBASIC3.73□□□□□ -1.81
NEK3P51956 AD001527.1-201ENST00000604228 379 ntTSL 5 BASIC3.73□□□□□ -1.81
NEK3P51956 AP001596.2-201ENST00000608410 312 ntBASIC3.73□□□□□ -1.81
NEK3P51956 AC068631.1-221ENST00000626006 592 ntTSL 5 BASIC3.73□□□□□ -1.81
NEK3P51956 SRP54-214ENST00000630962 162 ntTSL 5 BASIC3.73□□□□□ -1.81
NEK3P51956 GYPB-216ENST00000638448 363 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
NEK3P51956 AC009093.8-201ENST00000641769 292 ntBASIC3.73□□□□□ -1.81
NEK3P51956 TEX30-201ENST00000376019 1689 ntTSL 2 BASIC3.73□□□□□ -1.81
NEK3P51956 CATSPERB-201ENST00000256343 3623 ntAPPRIS P2 TSL 1 (best) BASIC3.72□□□□□ -1.81
NEK3P51956 PHTF2-201ENST00000248550 4778 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
NEK3P51956 RAD17-206ENST00000358030 2648 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
NEK3P51956 SNORA71.3-201ENST00000362582 128 ntBASIC3.72□□□□□ -1.81
NEK3P51956 SNORA4.3-201ENST00000365564 137 ntBASIC3.72□□□□□ -1.81
NEK3P51956 RNU6-1029P-201ENST00000384109 107 ntBASIC3.72□□□□□ -1.81
NEK3P51956 RNU6-517P-201ENST00000384362 110 ntBASIC3.72□□□□□ -1.81
NEK3P51956 RNU6-1215P-201ENST00000384441 102 ntBASIC3.72□□□□□ -1.81
NEK3P51956 CISD1P1-201ENST00000393907 327 ntBASIC3.72□□□□□ -1.81
NEK3P51956 OR5H8-201ENST00000394191 1045 ntAPPRIS P1 BASIC3.72□□□□□ -1.81
NEK3P51956 AL354719.1-201ENST00000406535 843 ntBASIC3.72□□□□□ -1.81
NEK3P51956 MRPL50P2-201ENST00000416821 482 ntBASIC3.72□□□□□ -1.81
NEK3P51956 AL356134.1-201ENST00000419815 373 ntTSL 3 BASIC3.72□□□□□ -1.81
NEK3P51956 AC011243.1-201ENST00000420184 415 ntTSL 3 BASIC3.72□□□□□ -1.81
NEK3P51956 AC104058.1-201ENST00000448028 297 ntBASIC3.72□□□□□ -1.81
NEK3P51956 MTUS2-AS2-203ENST00000452602 651 ntTSL 3 BASIC3.72□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 88.7 ms