Protein–RNA interactions for Protein: P49759

CLK1, Dual specificity protein kinase CLK1, humanhuman

Known RBP Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1P49759 IL1RL1-204ENST00000409584 2693 ntTSL 5 BASIC3.13□□□□□ -1.91
CLK1P49759 OR10A7-201ENST00000326258 951 ntAPPRIS P1 BASIC3.13□□□□□ -1.91
CLK1P49759 MT-CYB-201ENST00000361789 1141 ntAPPRIS P1 BASIC3.13□□□□□ -1.91
CLK1P49759 U8.3-201ENST00000363321 132 ntBASIC3.13□□□□□ -1.91
CLK1P49759 RPS20P2-201ENST00000402520 389 ntBASIC3.13□□□□□ -1.91
CLK1P49759 RPL7P25-201ENST00000404151 721 ntBASIC3.13□□□□□ -1.91
CLK1P49759 RNA5SP344-201ENST00000411081 104 ntBASIC3.13□□□□□ -1.91
CLK1P49759 AC092047.1-201ENST00000424997 240 ntBASIC3.13□□□□□ -1.91
CLK1P49759 USP9YP18-201ENST00000425912 695 ntBASIC3.13□□□□□ -1.91
CLK1P49759 AL355303.1-201ENST00000428920 680 ntTSL 3 BASIC3.13□□□□□ -1.91
CLK1P49759 AC091286.1-201ENST00000431233 461 ntBASIC3.13□□□□□ -1.91
CLK1P49759 AC122718.1-201ENST00000439448 744 ntBASIC3.13□□□□□ -1.91
CLK1P49759 BNIP3P2-201ENST00000441221 577 ntBASIC3.13□□□□□ -1.91
CLK1P49759 WASF1P1-201ENST00000447560 1131 ntBASIC3.13□□□□□ -1.91
CLK1P49759 FAM133DP-201ENST00000464802 691 ntBASIC3.13□□□□□ -1.91
CLK1P49759 AL121769.1-201ENST00000469473 401 ntBASIC3.13□□□□□ -1.91
CLK1P49759 AC112204.1-201ENST00000502591 103 ntBASIC3.13□□□□□ -1.91
CLK1P49759 AC023794.1-201ENST00000504210 403 ntTSL 2 BASIC3.13□□□□□ -1.91
CLK1P49759 SUB1-206ENST00000506237 908 ntAPPRIS P1 TSL 2 BASIC3.13□□□□□ -1.91
CLK1P49759 AC108078.1-201ENST00000508073 725 ntBASIC3.13□□□□□ -1.91
CLK1P49759 AC108043.1-201ENST00000512696 574 ntBASIC3.13□□□□□ -1.91
CLK1P49759 RNU6-718P-201ENST00000516166 105 ntBASIC3.13□□□□□ -1.91
CLK1P49759 RNU6-714P-201ENST00000516963 103 ntBASIC3.13□□□□□ -1.91
CLK1P49759 RNA5SP471-201ENST00000516971 106 ntBASIC3.13□□□□□ -1.91
CLK1P49759 AP000786.1-201ENST00000541092 581 ntTSL 4 BASIC3.13□□□□□ -1.91
CLK1P49759 AC009135.1-201ENST00000549303 776 ntTSL 2 BASIC3.13□□□□□ -1.91
CLK1P49759 DLGAP1-AS4-201ENST00000582054 757 ntTSL 5 BASIC3.13□□□□□ -1.91
CLK1P49759 AC091304.9-201ENST00000612091 226 ntBASIC3.13□□□□□ -1.91
CLK1P49759 AC009268.2-201ENST00000621925 457 ntBASIC3.13□□□□□ -1.91
CLK1P49759 hsa-mir-4776-1.1-201ENST00000636364 80 ntBASIC3.13□□□□□ -1.91
CLK1P49759 AC017071.1-201ENST00000564407 2204 ntBASIC3.13□□□□□ -1.91
CLK1P49759 AC032011.1-201ENST00000611703 1549 ntBASIC3.13□□□□□ -1.91
CLK1P49759 CDK1-201ENST00000316629 1733 ntTSL 5 BASIC3.13□□□□□ -1.91
CLK1P49759 STAU2-201ENST00000355780 4061 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
CLK1P49759 SAMD9-201ENST00000379958 6852 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
CLK1P49759 HSFY1-202ENST00000309834 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC3.12□□□□□ -1.91
CLK1P49759 HSFY2-202ENST00000344884 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC3.12□□□□□ -1.91
CLK1P49759 Y_RNA.46-201ENST00000362695 102 ntBASIC3.12□□□□□ -1.91
CLK1P49759 RNU5E-8P-201ENST00000363502 116 ntBASIC3.12□□□□□ -1.91
CLK1P49759 SNORA68.1-201ENST00000364537 132 ntBASIC3.12□□□□□ -1.91
CLK1P49759 RNU6-744P-201ENST00000365557 107 ntBASIC3.12□□□□□ -1.91
CLK1P49759 RNU6-217P-201ENST00000384164 104 ntBASIC3.12□□□□□ -1.91
CLK1P49759 RNU6-1316P-201ENST00000384242 108 ntBASIC3.12□□□□□ -1.91
CLK1P49759 RNY3P14-201ENST00000384309 102 ntBASIC3.12□□□□□ -1.91
CLK1P49759 MIR181A1-201ENST00000385026 110 ntBASIC3.12□□□□□ -1.91
CLK1P49759 RPS3AP36-201ENST00000398190 775 ntBASIC3.12□□□□□ -1.91
CLK1P49759 MTCO1P17-201ENST00000411522 491 ntBASIC3.12□□□□□ -1.91
CLK1P49759 AL160162.1-202ENST00000417654 244 ntTSL 3 BASIC3.12□□□□□ -1.91
CLK1P49759 AC073063.1-201ENST00000434352 607 ntBASIC3.12□□□□□ -1.91
CLK1P49759 HMGB3P11-201ENST00000440127 604 ntBASIC3.12□□□□□ -1.91
CLK1P49759 DARS-AS1-205ENST00000444649 558 ntTSL 3 BASIC3.12□□□□□ -1.91
CLK1P49759 AL589684.1-201ENST00000445974 507 ntTSL 3 BASIC3.12□□□□□ -1.91
CLK1P49759 OFD1P4Y-201ENST00000455273 1179 ntBASIC3.12□□□□□ -1.91
CLK1P49759 RN7SL499P-201ENST00000481141 276 ntBASIC3.12□□□□□ -1.91
CLK1P49759 AC079943.2-201ENST00000488999 716 ntTSL 3 BASIC3.12□□□□□ -1.91
CLK1P49759 AP002812.1-201ENST00000495378 474 ntBASIC3.12□□□□□ -1.91
CLK1P49759 AC082650.1-201ENST00000503542 575 ntTSL 4 BASIC3.12□□□□□ -1.91
CLK1P49759 AC116353.2-201ENST00000505332 712 ntBASIC3.12□□□□□ -1.91
CLK1P49759 AC097460.1-201ENST00000514624 590 ntTSL 3 BASIC3.12□□□□□ -1.91
CLK1P49759 SNORA70.18-201ENST00000516696 98 ntBASIC3.12□□□□□ -1.91
CLK1P49759 RNU2-46P-201ENST00000517038 113 ntBASIC3.12□□□□□ -1.91
CLK1P49759 AC109329.2-201ENST00000519658 482 ntBASIC3.12□□□□□ -1.91
CLK1P49759 AC026991.1-201ENST00000520815 463 ntTSL 3 BASIC3.12□□□□□ -1.91
CLK1P49759 AC090857.2-201ENST00000526362 723 ntTSL 2 BASIC3.12□□□□□ -1.91
CLK1P49759 AC103798.1-201ENST00000532562 376 ntTSL 2 BASIC3.12□□□□□ -1.91
CLK1P49759 OR5B10P-201ENST00000532869 642 ntBASIC3.12□□□□□ -1.91
CLK1P49759 LINC00508-201ENST00000538901 194 ntTSL 5 BASIC3.12□□□□□ -1.91
CLK1P49759 AC007513.1-201ENST00000548740 379 ntTSL 3 BASIC3.12□□□□□ -1.91
CLK1P49759 ZNF573-209ENST00000585724 453 ntTSL 5 BASIC3.12□□□□□ -1.91
CLK1P49759 AL353997.4-201ENST00000586196 166 ntBASIC3.12□□□□□ -1.91
CLK1P49759 AC113137.1-201ENST00000591869 558 ntTSL 4 BASIC3.12□□□□□ -1.91
CLK1P49759 AC103710.1-201ENST00000610003 901 ntBASIC3.12□□□□□ -1.91
CLK1P49759 AL359962.2-201ENST00000610044 303 ntTSL 5 BASIC3.12□□□□□ -1.91
CLK1P49759 UBE2Q2P6-201ENST00000612666 153 ntBASIC3.12□□□□□ -1.91
CLK1P49759 UBE2Q2P2-203ENST00000613592 761 ntBASIC3.12□□□□□ -1.91
CLK1P49759 AL603758.1-201ENST00000618654 241 ntBASIC3.12□□□□□ -1.91
CLK1P49759 U4.6-201ENST00000621618 127 ntBASIC3.12□□□□□ -1.91
CLK1P49759 CR381653.2-201ENST00000624041 768 ntBASIC3.12□□□□□ -1.91
CLK1P49759 AC073476.4-201ENST00000628409 72 ntBASIC3.12□□□□□ -1.91
CLK1P49759 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC3.12□□□□□ -1.91
CLK1P49759 OR4M1-202ENST00000641200 3493 ntAPPRIS P1 BASIC3.12□□□□□ -1.91
CLK1P49759 AL161431.1-201ENST00000618966 4205 ntBASIC3.11□□□□□ -1.91
CLK1P49759 ELF2P3-201ENST00000445099 1506 ntBASIC3.11□□□□□ -1.91
CLK1P49759 RFPL3S-202ENST00000382086 455 ntAPPRIS ALT2 TSL 2 BASIC3.11□□□□□ -1.91
CLK1P49759 MIR449B-201ENST00000384995 97 ntBASIC3.11□□□□□ -1.91
CLK1P49759 AL122016.1-201ENST00000403365 367 ntBASIC3.11□□□□□ -1.91
CLK1P49759 AL513475.1-201ENST00000406602 315 ntBASIC3.11□□□□□ -1.91
CLK1P49759 RPS29P4-201ENST00000414733 161 ntBASIC3.11□□□□□ -1.91
CLK1P49759 AL589765.2-201ENST00000420382 424 ntTSL 3 BASIC3.11□□□□□ -1.91
CLK1P49759 AC026355.1-201ENST00000423466 587 ntTSL 5 BASIC3.11□□□□□ -1.91
CLK1P49759 SUMO1P4-201ENST00000429430 302 ntBASIC3.11□□□□□ -1.91
CLK1P49759 MTND1P2-201ENST00000430604 821 ntBASIC3.11□□□□□ -1.91
CLK1P49759 GTF2IP20-201ENST00000431663 360 ntBASIC3.11□□□□□ -1.91
CLK1P49759 AL139118.1-201ENST00000432707 446 ntTSL 3 BASIC3.11□□□□□ -1.91
CLK1P49759 AC005019.2-201ENST00000434321 359 ntTSL 5 BASIC3.11□□□□□ -1.91
CLK1P49759 AC078845.1-202ENST00000435996 733 ntTSL 3 BASIC3.11□□□□□ -1.91
CLK1P49759 AC073614.1-201ENST00000438690 650 ntBASIC3.11□□□□□ -1.91
CLK1P49759 FAM103A2P-201ENST00000444122 354 ntBASIC3.11□□□□□ -1.91
CLK1P49759 AC007879.3-202ENST00000448786 823 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
CLK1P49759 AC079448.1-201ENST00000449377 373 ntBASIC3.11□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 118.9 ms