Protein–RNA interactions for Protein: P49458

SRP9, Signal recognition particle 9 kDa protein, humanhuman

Known RBP Predictions only

Length 86 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRP9P49458 RNU5A-7P-201ENST00000515979 116 ntBASIC1.37□□□□□ -2.19
SRP9P49458 RNA5SP137-201ENST00000516833 135 ntBASIC1.37□□□□□ -2.19
SRP9P49458 LINC01608-201ENST00000523557 544 ntTSL 4 BASIC1.37□□□□□ -2.19
SRP9P49458 AC087311.2-201ENST00000549660 320 ntTSL 4 BASIC1.37□□□□□ -2.19
SRP9P49458 AL133372.3-201ENST00000553082 821 ntTSL 3 BASIC1.37□□□□□ -2.19
SRP9P49458 AL355076.2-202ENST00000553754 574 ntTSL 4 BASIC1.37□□□□□ -2.19
SRP9P49458 AC027458.1-201ENST00000563639 613 ntTSL 1 (best) BASIC1.37□□□□□ -2.19
SRP9P49458 AC009117.2-201ENST00000565374 504 ntTSL 3 BASIC1.37□□□□□ -2.19
SRP9P49458 SNORD53B-201ENST00000577887 78 ntBASIC1.37□□□□□ -2.19
SRP9P49458 BNIP3P25-201ENST00000596023 559 ntBASIC1.37□□□□□ -2.19
SRP9P49458 AC022387.2-201ENST00000604050 448 ntBASIC1.37□□□□□ -2.19
SRP9P49458 FRG1HP-204ENST00000617940 757 ntBASIC1.37□□□□□ -2.19
SRP9P49458 LINC02211-204ENST00000642024 1070 ntBASIC1.37□□□□□ -2.19
SRP9P49458 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.37□□□□□ -2.19
SRP9P49458 AL161722.3-201ENST00000605789 2983 ntBASIC1.37□□□□□ -2.19
SRP9P49458 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC1.37□□□□□ -2.19
SRP9P49458 SNORA27.3-201ENST00000364937 134 ntBASIC1.36□□□□□ -2.19
SRP9P49458 AKAP14-203ENST00000371425 793 ntAPPRIS ALT2 TSL 5 BASIC1.36□□□□□ -2.19
SRP9P49458 SNORA51.6-201ENST00000384151 125 ntBASIC1.36□□□□□ -2.19
SRP9P49458 MIR525-201ENST00000384978 85 ntBASIC1.36□□□□□ -2.19
SRP9P49458 SNORA67.5-201ENST00000391036 107 ntBASIC1.36□□□□□ -2.19
SRP9P49458 HMGB1P17-201ENST00000403495 628 ntBASIC1.36□□□□□ -2.19
SRP9P49458 SDAD1P3-201ENST00000427380 333 ntBASIC1.36□□□□□ -2.19
SRP9P49458 LINC02095-201ENST00000430908 346 ntTSL 2 BASIC1.36□□□□□ -2.19
SRP9P49458 AC010105.1-201ENST00000437290 385 ntTSL 5 BASIC1.36□□□□□ -2.19
SRP9P49458 MTCO1P48-201ENST00000448024 1096 ntBASIC1.36□□□□□ -2.19
SRP9P49458 AC006042.4-201ENST00000451066 692 ntTSL 5 BASIC1.36□□□□□ -2.19
SRP9P49458 FO393415.2-201ENST00000480085 343 ntBASIC1.36□□□□□ -2.19
SRP9P49458 AC023790.1-201ENST00000482174 347 ntBASIC1.36□□□□□ -2.19
SRP9P49458 ZNF639-206ENST00000484866 1730 ntAPPRIS P1 TSL 2 BASIC1.36□□□□□ -2.19
SRP9P49458 LINC01216-201ENST00000515728 824 ntTSL 5 BASIC1.36□□□□□ -2.19
SRP9P49458 IGJP1-201ENST00000522682 475 ntBASIC1.36□□□□□ -2.19
SRP9P49458 HTN3-202ENST00000526767 578 ntAPPRIS P2 TSL 1 (best) BASIC1.36□□□□□ -2.19
SRP9P49458 AC108471.2-204ENST00000526807 784 ntTSL 5 BASIC1.36□□□□□ -2.19
SRP9P49458 AP005435.4-201ENST00000529514 284 ntBASIC1.36□□□□□ -2.19
SRP9P49458 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC1.36□□□□□ -2.19
SRP9P49458 OR6C68-201ENST00000548615 939 ntAPPRIS P1 BASIC1.36□□□□□ -2.19
SRP9P49458 AC015712.3-201ENST00000559380 164 ntBASIC1.36□□□□□ -2.19
SRP9P49458 AC009101.2-201ENST00000564293 456 ntTSL 3 BASIC1.36□□□□□ -2.19
SRP9P49458 RBBP8-210ENST00000581687 617 ntTSL 2 BASIC1.36□□□□□ -2.19
SRP9P49458 AC037487.2-201ENST00000581796 537 ntTSL 3 BASIC1.36□□□□□ -2.19
SRP9P49458 TCF4-AS2-201ENST00000586467 445 ntTSL 2 BASIC1.36□□□□□ -2.19
SRP9P49458 AP000403.1-201ENST00000603349 851 ntBASIC1.36□□□□□ -2.19
SRP9P49458 BX248123.2-201ENST00000606318 124 ntBASIC1.36□□□□□ -2.19
SRP9P49458 AL445493.3-201ENST00000619568 477 ntBASIC1.36□□□□□ -2.19
SRP9P49458 UBE2L2-201ENST00000254302 429 ntBASIC1.35□□□□□ -2.19
SRP9P49458 MT-CYB-201ENST00000361789 1141 ntAPPRIS P1 BASIC1.35□□□□□ -2.19
SRP9P49458 RNU6-77P-201ENST00000410554 91 ntBASIC1.35□□□□□ -2.19
SRP9P49458 AC069280.1-201ENST00000413094 439 ntTSL 3 BASIC1.35□□□□□ -2.19
SRP9P49458 AC074117.2-201ENST00000417130 397 ntBASIC1.35□□□□□ -2.19
SRP9P49458 LURAP1L-AS1-201ENST00000417638 799 ntTSL 3 BASIC1.35□□□□□ -2.19
SRP9P49458 AC133106.1-201ENST00000419029 397 ntTSL 3 BASIC1.35□□□□□ -2.19
SRP9P49458 BEND7P1-201ENST00000422058 457 ntBASIC1.35□□□□□ -2.19
SRP9P49458 OPA1-AS1-201ENST00000433105 492 ntTSL 3 BASIC1.35□□□□□ -2.19
SRP9P49458 AL360169.1-201ENST00000435116 143 ntTSL 5 BASIC1.35□□□□□ -2.19
SRP9P49458 BNIP3P2-201ENST00000441221 577 ntBASIC1.35□□□□□ -2.19
SRP9P49458 AC118469.1-201ENST00000442943 488 ntBASIC1.35□□□□□ -2.19
SRP9P49458 HMGN2P23-201ENST00000456759 269 ntBASIC1.35□□□□□ -2.19
SRP9P49458 MAGI1-AS1-201ENST00000472514 591 ntTSL 3 BASIC1.35□□□□□ -2.19
SRP9P49458 SSR3-208ENST00000496050 579 ntTSL 4 BASIC1.35□□□□□ -2.19
SRP9P49458 RNU6-416P-201ENST00000516265 103 ntBASIC1.35□□□□□ -2.19
SRP9P49458 CCDC179-202ENST00000532798 791 ntAPPRIS P1 TSL 2 BASIC1.35□□□□□ -2.19
SRP9P49458 EMP1-206ENST00000537612 505 ntTSL 3 BASIC1.35□□□□□ -2.19
SRP9P49458 AC079907.1-201ENST00000552707 374 ntTSL 3 BASIC1.35□□□□□ -2.19
SRP9P49458 AC124947.2-202ENST00000552735 133 ntBASIC1.35□□□□□ -2.19
SRP9P49458 MIR4524B-201ENST00000581569 115 ntBASIC1.35□□□□□ -2.19
SRP9P49458 MIR4713-201ENST00000582691 75 ntBASIC1.35□□□□□ -2.19
SRP9P49458 ABBA01006766.1-201ENST00000584728 294 ntBASIC1.35□□□□□ -2.19
SRP9P49458 AL031274.2-201ENST00000599419 203 ntBASIC1.35□□□□□ -2.19
SRP9P49458 AL022067.1-201ENST00000602426 454 ntBASIC1.35□□□□□ -2.19
SRP9P49458 AC080013.4-201ENST00000607624 649 ntBASIC1.35□□□□□ -2.19
SRP9P49458 AC112250.2-201ENST00000609450 491 ntTSL 3 BASIC1.35□□□□□ -2.19
SRP9P49458 AL589743.7-201ENST00000612637 233 ntBASIC1.35□□□□□ -2.19
SRP9P49458 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC1.35□□□□□ -2.19
SRP9P49458 ATXN3L-201ENST00000380622 2164 ntAPPRIS P1 BASIC1.35□□□□□ -2.19
SRP9P49458 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC1.35□□□□□ -2.19
SRP9P49458 GDI2P1-201ENST00000429312 1336 ntBASIC1.35□□□□□ -2.19
SRP9P49458 RPL39-201ENST00000361575 401 ntAPPRIS P1 TSL 1 (best) BASIC1.34□□□□□ -2.19
SRP9P49458 RNU6-252P-201ENST00000363232 107 ntBASIC1.34□□□□□ -2.19
SRP9P49458 MIR517C-201ENST00000385103 95 ntBASIC1.34□□□□□ -2.19
SRP9P49458 MIR514A1-201ENST00000385133 98 ntBASIC1.34□□□□□ -2.19
SRP9P49458 RNA5SP212-201ENST00000391223 107 ntBASIC1.34□□□□□ -2.19
SRP9P49458 AL033519.2-201ENST00000403958 392 ntBASIC1.34□□□□□ -2.19
SRP9P49458 AL356131.1-201ENST00000405826 414 ntBASIC1.34□□□□□ -2.19
SRP9P49458 U6atac.2-201ENST00000408644 118 ntBASIC1.34□□□□□ -2.19
SRP9P49458 AC096649.2-201ENST00000416186 393 ntBASIC1.34□□□□□ -2.19
SRP9P49458 LINC01065-201ENST00000417989 577 ntTSL 3 BASIC1.34□□□□□ -2.19
SRP9P49458 AL358453.1-201ENST00000422522 250 ntBASIC1.34□□□□□ -2.19
SRP9P49458 BX510359.4-201ENST00000423750 193 ntBASIC1.34□□□□□ -2.19
SRP9P49458 AL513185.2-201ENST00000425543 193 ntBASIC1.34□□□□□ -2.19
SRP9P49458 MTCO3P46-201ENST00000425787 232 ntBASIC1.34□□□□□ -2.19
SRP9P49458 GTF2IP7-202ENST00000436677 309 ntBASIC1.34□□□□□ -2.19
SRP9P49458 GSAP-208ENST00000441833 737 ntTSL 1 (best) BASIC1.34□□□□□ -2.19
SRP9P49458 LINC01510-201ENST00000441991 468 ntTSL 3 BASIC1.34□□□□□ -2.19
SRP9P49458 LINC01758-201ENST00000448001 458 ntTSL 3 BASIC1.34□□□□□ -2.19
SRP9P49458 AC008154.1-201ENST00000453087 327 ntTSL 3 BASIC1.34□□□□□ -2.19
SRP9P49458 SNORD13-201ENST00000459299 104 ntBASIC1.34□□□□□ -2.19
SRP9P49458 AC005410.1-202ENST00000460347 485 ntBASIC1.34□□□□□ -2.19
SRP9P49458 HMGB1P35-201ENST00000503360 598 ntBASIC1.34□□□□□ -2.19
SRP9P49458 SUB1-206ENST00000506237 908 ntAPPRIS P1 TSL 2 BASIC1.34□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 122.5 ms