Protein–RNA interactions for Protein: P48431

SOX2, Transcription factor SOX-2, humanhuman

Predictions only

Length 317 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2P48431 AC091390.3-201ENST00000426478 338 ntBASIC3.35□□□□□ -1.87
SOX2P48431 AL691449.1-201ENST00000426570 421 ntBASIC3.35□□□□□ -1.87
SOX2P48431 AL451062.2-201ENST00000427515 271 ntBASIC3.35□□□□□ -1.87
SOX2P48431 NDUFA5P4-201ENST00000436704 385 ntBASIC3.35□□□□□ -1.87
SOX2P48431 LINC01423-202ENST00000436845 423 ntTSL 2 BASIC3.35□□□□□ -1.87
SOX2P48431 HMGB1P18-201ENST00000438801 619 ntBASIC3.35□□□□□ -1.87
SOX2P48431 AL035634.1-201ENST00000446768 372 ntTSL 2 BASIC3.35□□□□□ -1.87
SOX2P48431 AC008264.1-201ENST00000447612 367 ntBASIC3.35□□□□□ -1.87
SOX2P48431 GSTA9P-202ENST00000448991 521 ntTSL 3 BASIC3.35□□□□□ -1.87
SOX2P48431 TH2LCRR-203ENST00000457489 439 ntTSL 3 BASIC3.35□□□□□ -1.87
SOX2P48431 RPS20P22-201ENST00000473700 357 ntBASIC3.35□□□□□ -1.87
SOX2P48431 AC084198.1-201ENST00000477747 402 ntBASIC3.35□□□□□ -1.87
SOX2P48431 RPS15AP34-201ENST00000487776 387 ntBASIC3.35□□□□□ -1.87
SOX2P48431 AC104136.1-201ENST00000512969 394 ntBASIC3.35□□□□□ -1.87
SOX2P48431 APOOP4-201ENST00000513530 597 ntBASIC3.35□□□□□ -1.87
SOX2P48431 RNU6-143P-201ENST00000516942 93 ntBASIC3.35□□□□□ -1.87
SOX2P48431 AC087439.1-201ENST00000517920 398 ntTSL 3 BASIC3.35□□□□□ -1.87
SOX2P48431 OR5D17P-201ENST00000531492 978 ntBASIC3.35□□□□□ -1.87
SOX2P48431 NUDT7-203ENST00000563839 316 ntTSL 3 BASIC3.35□□□□□ -1.87
SOX2P48431 MIR4277-201ENST00000578298 84 ntBASIC3.35□□□□□ -1.87
SOX2P48431 MIR4795-201ENST00000584182 89 ntBASIC3.35□□□□□ -1.87
SOX2P48431 AC016747.2-202ENST00000607743 332 ntTSL 5 BASIC3.35□□□□□ -1.87
SOX2P48431 Z82243.1-201ENST00000609432 473 ntBASIC3.35□□□□□ -1.87
SOX2P48431 HTN1-205ENST00000610341 536 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
SOX2P48431 AL391261.4-201ENST00000616012 481 ntBASIC3.35□□□□□ -1.87
SOX2P48431 AC103705.1-201ENST00000619013 241 ntBASIC3.35□□□□□ -1.87
SOX2P48431 AC135584.1-201ENST00000624438 333 ntTSL 5 BASIC3.35□□□□□ -1.87
SOX2P48431 U6.98-201ENST00000637157 84 ntBASIC3.35□□□□□ -1.87
SOX2P48431 TMEM71-202ENST00000377901 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC3.35□□□□□ -1.87
SOX2P48431 PPIP5K2-215ENST00000613674 4933 ntAPPRIS ALT2 TSL 2 BASIC3.34□□□□□ -1.87
SOX2P48431 AC093274.1-201ENST00000503488 5454 ntTSL 5 BASIC3.34□□□□□ -1.87
SOX2P48431 PLSCR5-201ENST00000443512 1969 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
SOX2P48431 CCDC110-202ENST00000393540 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC3.34□□□□□ -1.87
SOX2P48431 PRKACB-208ENST00000394839 4200 ntTSL 2 BASIC3.34□□□□□ -1.87
SOX2P48431 MIR423-201ENST00000362201 94 ntBASIC3.34□□□□□ -1.87
SOX2P48431 RNU6-1167P-201ENST00000363227 94 ntBASIC3.34□□□□□ -1.87
SOX2P48431 Y_RNA.813-201ENST00000364639 102 ntBASIC3.34□□□□□ -1.87
SOX2P48431 SNORA16.2-201ENST00000390991 127 ntBASIC3.34□□□□□ -1.87
SOX2P48431 HSPE1P26-201ENST00000405341 275 ntBASIC3.34□□□□□ -1.87
SOX2P48431 RNU2-71P-201ENST00000411395 189 ntBASIC3.34□□□□□ -1.87
SOX2P48431 RPL7P10-201ENST00000417407 739 ntBASIC3.34□□□□□ -1.87
SOX2P48431 IGKV1OR9-2-201ENST00000431378 277 ntBASIC3.34□□□□□ -1.87
SOX2P48431 AL033380.1-201ENST00000442781 421 ntTSL 2 BASIC3.34□□□□□ -1.87
SOX2P48431 AL390961.1-201ENST00000446557 319 ntTSL 2 BASIC3.34□□□□□ -1.87
SOX2P48431 NHS-AS1-201ENST00000452788 366 ntTSL 3 BASIC3.34□□□□□ -1.87
SOX2P48431 RNU7-167P-201ENST00000459160 62 ntBASIC3.34□□□□□ -1.87
SOX2P48431 RNU7-66P-201ENST00000459469 62 ntBASIC3.34□□□□□ -1.87
SOX2P48431 RPL21P11-201ENST00000461458 483 ntBASIC3.34□□□□□ -1.87
SOX2P48431 DYNLL1P5-201ENST00000467158 270 ntBASIC3.34□□□□□ -1.87
SOX2P48431 RPL31P60-201ENST00000478450 367 ntBASIC3.34□□□□□ -1.87
SOX2P48431 TRBVA-201ENST00000498804 316 ntBASIC3.34□□□□□ -1.87
SOX2P48431 AC114316.1-201ENST00000511323 278 ntTSL 5 BASIC3.34□□□□□ -1.87
SOX2P48431 SNORA19.2-201ENST00000516013 114 ntBASIC3.34□□□□□ -1.87
SOX2P48431 RNU6-864P-201ENST00000516256 108 ntBASIC3.34□□□□□ -1.87
SOX2P48431 RN7SKP209-201ENST00000516888 304 ntBASIC3.34□□□□□ -1.87
SOX2P48431 RNA5SP471-201ENST00000516971 106 ntBASIC3.34□□□□□ -1.87
SOX2P48431 AC090136.1-201ENST00000520009 240 ntBASIC3.34□□□□□ -1.87
SOX2P48431 AP001804.3-201ENST00000525146 880 ntBASIC3.34□□□□□ -1.87
SOX2P48431 ATP5F1P5-201ENST00000526403 760 ntBASIC3.34□□□□□ -1.87
SOX2P48431 AL132780.1-201ENST00000548819 556 ntTSL 4 BASIC3.34□□□□□ -1.87
SOX2P48431 AC011611.2-201ENST00000549888 358 ntTSL 3 BASIC3.34□□□□□ -1.87
SOX2P48431 AC091534.1-202ENST00000549953 468 ntTSL 5 BASIC3.34□□□□□ -1.87
SOX2P48431 LINC02305-201ENST00000554142 476 ntTSL 3 BASIC3.34□□□□□ -1.87
SOX2P48431 hsa-mir-3119-1.1-201ENST00000577602 85 ntBASIC3.34□□□□□ -1.87
SOX2P48431 RN7SL600P-201ENST00000581811 299 ntBASIC3.34□□□□□ -1.87
SOX2P48431 TTN-AS1-243ENST00000591867 748 ntTSL 5 BASIC3.34□□□□□ -1.87
SOX2P48431 AC234771.5-201ENST00000600161 514 ntBASIC3.34□□□□□ -1.87
SOX2P48431 AC098826.3-201ENST00000603823 466 ntBASIC3.34□□□□□ -1.87
SOX2P48431 TEX41-238ENST00000604253 709 ntTSL 5 BASIC3.34□□□□□ -1.87
SOX2P48431 AC104237.2-201ENST00000612456 443 ntBASIC3.34□□□□□ -1.87
SOX2P48431 GPRC6A-203ENST00000530250 2310 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
SOX2P48431 RNF38-203ENST00000353739 4945 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
SOX2P48431 NDST3-201ENST00000296499 5961 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
SOX2P48431 LRRC39-201ENST00000342895 1881 ntAPPRIS P1 TSL 5 BASIC3.34□□□□□ -1.87
SOX2P48431 TBC1D15-210ENST00000485960 2489 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.88
SOX2P48431 PRKACB-202ENST00000370682 4288 ntTSL 1 (best) BASIC3.34□□□□□ -1.88
SOX2P48431 EPC1-203ENST00000375110 3909 ntTSL 1 (best) BASIC3.34□□□□□ -1.88
SOX2P48431 CAB39L-206ENST00000410043 1627 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
SOX2P48431 MT-ND4L-201ENST00000361335 297 ntAPPRIS P1 BASIC3.33□□□□□ -1.88
SOX2P48431 Y_RNA.184-201ENST00000363884 108 ntBASIC3.33□□□□□ -1.88
SOX2P48431 RNU6-512P-201ENST00000364438 103 ntBASIC3.33□□□□□ -1.88
SOX2P48431 OR51A4-201ENST00000380373 1002 ntAPPRIS P1 BASIC3.33□□□□□ -1.88
SOX2P48431 Y_RNA.534-201ENST00000384599 112 ntBASIC3.33□□□□□ -1.88
SOX2P48431 AL391417.1-201ENST00000404100 426 ntBASIC3.33□□□□□ -1.88
SOX2P48431 AL356967.1-201ENST00000406305 431 ntBASIC3.33□□□□□ -1.88
SOX2P48431 RPL26P29-201ENST00000415623 438 ntBASIC3.33□□□□□ -1.88
SOX2P48431 AC092941.1-201ENST00000415940 427 ntTSL 5 BASIC3.33□□□□□ -1.88
SOX2P48431 ACTR3BP6-201ENST00000422332 1241 ntBASIC3.33□□□□□ -1.88
SOX2P48431 AL669831.1-202ENST00000428504 417 ntBASIC3.33□□□□□ -1.88
SOX2P48431 AL592045.1-201ENST00000429867 352 ntBASIC3.33□□□□□ -1.88
SOX2P48431 AL033504.1-204ENST00000434985 413 ntTSL 2 BASIC3.33□□□□□ -1.88
SOX2P48431 HSPD1P21-201ENST00000436541 245 ntBASIC3.33□□□□□ -1.88
SOX2P48431 GTF2IP13-201ENST00000438487 386 ntBASIC3.33□□□□□ -1.88
SOX2P48431 CXorf51B-201ENST00000438525 436 ntAPPRIS P1 TSL 2 BASIC3.33□□□□□ -1.88
SOX2P48431 AC093579.1-201ENST00000439455 352 ntTSL 2 BASIC3.33□□□□□ -1.88
SOX2P48431 HMGB3P11-201ENST00000440127 604 ntBASIC3.33□□□□□ -1.88
SOX2P48431 RPL21P41-201ENST00000459863 264 ntBASIC3.33□□□□□ -1.88
SOX2P48431 RN7SL738P-201ENST00000470264 297 ntBASIC3.33□□□□□ -1.88
SOX2P48431 OARD1-209ENST00000471367 401 ntTSL 2 BASIC3.33□□□□□ -1.88
SOX2P48431 RPS29P22-201ENST00000472363 168 ntBASIC3.33□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 126.1 ms