Protein–RNA interactions for Protein: P47902

CDX1, Homeobox protein CDX-1, humanhuman

Predicted RBP Predictions only

Length 265 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDX1P47902 RNU2-27P-201ENST00000516185 142 ntBASIC2.75□□□□□ -1.97
CDX1P47902 SCARNA24.1-201ENST00000516465 137 ntBASIC2.75□□□□□ -1.97
CDX1P47902 OR5B19P-201ENST00000531766 928 ntBASIC2.75□□□□□ -1.97
CDX1P47902 LINC02461-201ENST00000553211 836 ntTSL 3 BASIC2.75□□□□□ -1.97
CDX1P47902 AL160191.1-201ENST00000555480 566 ntTSL 4 BASIC2.75□□□□□ -1.97
CDX1P47902 AL139317.3-202ENST00000555689 528 ntTSL 5 BASIC2.75□□□□□ -1.97
CDX1P47902 AL359212.1-201ENST00000556608 614 ntBASIC2.75□□□□□ -1.97
CDX1P47902 AC084756.1-201ENST00000558237 606 ntTSL 5 BASIC2.75□□□□□ -1.97
CDX1P47902 AC069029.1-201ENST00000558736 263 ntTSL 2 BASIC2.75□□□□□ -1.97
CDX1P47902 SLC12A1-210ENST00000561031 735 ntTSL 2 BASIC2.75□□□□□ -1.97
CDX1P47902 AC025281.1-201ENST00000567026 265 ntBASIC2.75□□□□□ -1.97
CDX1P47902 AC011933.3-201ENST00000578226 372 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
CDX1P47902 AL355598.1-201ENST00000604169 202 ntBASIC2.75□□□□□ -1.97
CDX1P47902 AL035413.2-201ENST00000604801 525 ntBASIC2.75□□□□□ -1.97
CDX1P47902 AC103858.1-201ENST00000607019 476 ntTSL 3 BASIC2.75□□□□□ -1.97
CDX1P47902 AC006566.1-201ENST00000608943 513 ntBASIC2.75□□□□□ -1.97
CDX1P47902 AC069200.1-201ENST00000609511 323 ntBASIC2.75□□□□□ -1.97
CDX1P47902 DLEU2_1.1-201ENST00000612089 120 ntBASIC2.75□□□□□ -1.97
CDX1P47902 AC011939.3-201ENST00000613686 466 ntBASIC2.75□□□□□ -1.97
CDX1P47902 AC010678.1-201ENST00000614118 713 ntBASIC2.75□□□□□ -1.97
CDX1P47902 DLEU2_1.2-201ENST00000614667 120 ntBASIC2.75□□□□□ -1.97
CDX1P47902 THOC1-220ENST00000621904 1083 ntTSL 5 BASIC2.75□□□□□ -1.97
CDX1P47902 AC090582.1-201ENST00000636321 199 ntBASIC2.75□□□□□ -1.97
CDX1P47902 IL1RL1-204ENST00000409584 2693 ntTSL 5 BASIC2.75□□□□□ -1.97
CDX1P47902 TFEC-202ENST00000320239 6605 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
CDX1P47902 GPRC6A-202ENST00000368549 2622 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
CDX1P47902 MFSD8-233ENST00000641482 4860 ntBASIC2.74□□□□□ -1.97
CDX1P47902 OR5J1P-201ENST00000313544 939 ntBASIC2.74□□□□□ -1.97
CDX1P47902 OR10A7-201ENST00000326258 951 ntAPPRIS P1 BASIC2.74□□□□□ -1.97
CDX1P47902 RNU6-778P-201ENST00000363269 103 ntBASIC2.74□□□□□ -1.97
CDX1P47902 SNORD21-201ENST00000383953 95 ntBASIC2.74□□□□□ -1.97
CDX1P47902 HIST1H2APS3-201ENST00000403259 134 ntBASIC2.74□□□□□ -1.97
CDX1P47902 RNU6ATAC16P-201ENST00000408591 138 ntBASIC2.74□□□□□ -1.97
CDX1P47902 MIR1289-1-201ENST00000408836 144 ntBASIC2.74□□□□□ -1.97
CDX1P47902 RPL26P27-201ENST00000414397 437 ntBASIC2.74□□□□□ -1.97
CDX1P47902 ATG3P1-201ENST00000419507 911 ntBASIC2.74□□□□□ -1.97
CDX1P47902 AL353678.1-201ENST00000422735 741 ntBASIC2.74□□□□□ -1.97
CDX1P47902 AL353729.1-201ENST00000425044 720 ntBASIC2.74□□□□□ -1.97
CDX1P47902 SKA2P1-201ENST00000425592 390 ntBASIC2.74□□□□□ -1.97
CDX1P47902 AC006946.1-201ENST00000429106 328 ntBASIC2.74□□□□□ -1.97
CDX1P47902 AL159987.2-201ENST00000432754 307 ntBASIC2.74□□□□□ -1.97
CDX1P47902 AC112518.1-201ENST00000436089 575 ntTSL 4 BASIC2.74□□□□□ -1.97
CDX1P47902 RPS15AP5-201ENST00000436276 388 ntBASIC2.74□□□□□ -1.97
CDX1P47902 AL353706.1-201ENST00000436728 494 ntBASIC2.74□□□□□ -1.97
CDX1P47902 RPL23AP58-201ENST00000440453 469 ntBASIC2.74□□□□□ -1.97
CDX1P47902 RPS15AP27-201ENST00000449183 343 ntBASIC2.74□□□□□ -1.97
CDX1P47902 RGS5-217ENST00000451759 835 ntTSL 3 BASIC2.74□□□□□ -1.97
CDX1P47902 AL358075.2-201ENST00000452785 339 ntTSL 2 BASIC2.74□□□□□ -1.97
CDX1P47902 RN7SL75P-201ENST00000461926 281 ntBASIC2.74□□□□□ -1.97
CDX1P47902 RN7SL594P-201ENST00000470590 287 ntBASIC2.74□□□□□ -1.97
CDX1P47902 AC128713.1-201ENST00000471495 306 ntBASIC2.74□□□□□ -1.97
CDX1P47902 AC126182.1-201ENST00000478134 357 ntBASIC2.74□□□□□ -1.97
CDX1P47902 RN7SL499P-201ENST00000481141 276 ntBASIC2.74□□□□□ -1.97
CDX1P47902 RPS27AP10-201ENST00000496103 208 ntBASIC2.74□□□□□ -1.97
CDX1P47902 AC082650.1-201ENST00000503542 575 ntTSL 4 BASIC2.74□□□□□ -1.97
CDX1P47902 AC117460.1-201ENST00000508964 467 ntTSL 3 BASIC2.74□□□□□ -1.97
CDX1P47902 AC108078.2-201ENST00000510750 236 ntBASIC2.74□□□□□ -1.97
CDX1P47902 AC124854.1-202ENST00000513779 339 ntTSL 3 BASIC2.74□□□□□ -1.97
CDX1P47902 RNU6-914P-201ENST00000516749 109 ntBASIC2.74□□□□□ -1.97
CDX1P47902 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC2.74□□□□□ -1.97
CDX1P47902 AP001458.1-201ENST00000532626 92 ntTSL 3 BASIC2.74□□□□□ -1.97
CDX1P47902 HOMER1-205ENST00000535690 642 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
CDX1P47902 ADI1P3-201ENST00000549509 470 ntBASIC2.74□□□□□ -1.97
CDX1P47902 AC073591.1-201ENST00000552736 597 ntTSL 3 BASIC2.74□□□□□ -1.97
CDX1P47902 H3F3AP1-201ENST00000559984 334 ntBASIC2.74□□□□□ -1.97
CDX1P47902 AC126407.1-201ENST00000563044 566 ntTSL 4 BASIC2.74□□□□□ -1.97
CDX1P47902 AC009145.3-201ENST00000567386 476 ntTSL 3 BASIC2.74□□□□□ -1.97
CDX1P47902 MIR3913-1-201ENST00000577744 102 ntBASIC2.74□□□□□ -1.97
CDX1P47902 AC098848.2-201ENST00000588023 330 ntBASIC2.74□□□□□ -1.97
CDX1P47902 LINC01897-203ENST00000591503 369 ntTSL 2 BASIC2.74□□□□□ -1.97
CDX1P47902 RNASEH2B-AS1-206ENST00000601286 657 ntTSL 5 BASIC2.74□□□□□ -1.97
CDX1P47902 AC012468.1-201ENST00000604888 430 ntBASIC2.74□□□□□ -1.97
CDX1P47902 AC013562.2-201ENST00000611632 603 ntBASIC2.74□□□□□ -1.97
CDX1P47902 AL359547.2-201ENST00000615810 418 ntBASIC2.74□□□□□ -1.97
CDX1P47902 AL355365.1-201ENST00000616480 294 ntBASIC2.74□□□□□ -1.97
CDX1P47902 AC002064.3-201ENST00000623448 346 ntBASIC2.74□□□□□ -1.97
CDX1P47902 U6.105-201ENST00000637379 88 ntBASIC2.74□□□□□ -1.97
CDX1P47902 U6.99-201ENST00000637524 83 ntBASIC2.74□□□□□ -1.97
CDX1P47902 FGF14-201ENST00000376131 12882 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
CDX1P47902 ESCO1-201ENST00000269214 4523 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
CDX1P47902 MBNL3-204ENST00000370853 2661 ntAPPRIS P4 TSL 1 (best) BASIC2.74□□□□□ -1.97
CDX1P47902 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
CDX1P47902 KNTC1-204ENST00000436959 2412 ntTSL 2 BASIC2.73□□□□□ -1.97
CDX1P47902 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC2.73□□□□□ -1.97
CDX1P47902 MGAT4C-211ENST00000621808 2582 ntAPPRIS P1 TSL 1 (best) BASIC2.73□□□□□ -1.97
CDX1P47902 TIMM9-202ENST00000395159 1336 ntAPPRIS P1 TSL 1 (best) BASIC2.73□□□□□ -1.97
CDX1P47902 U3.6-201ENST00000363622 211 ntBASIC2.73□□□□□ -1.97
CDX1P47902 SNORD46.1-201ENST00000364139 104 ntBASIC2.73□□□□□ -1.97
CDX1P47902 SNORA4.3-201ENST00000365564 137 ntBASIC2.73□□□□□ -1.97
CDX1P47902 AIF1-202ENST00000376049 524 ntTSL 1 (best) BASIC2.73□□□□□ -1.97
CDX1P47902 RNU6-658P-201ENST00000384606 106 ntBASIC2.73□□□□□ -1.97
CDX1P47902 MS4A4E-201ENST00000398984 479 ntTSL 5 BASIC2.73□□□□□ -1.97
CDX1P47902 RNU6-193P-201ENST00000410977 107 ntBASIC2.73□□□□□ -1.97
CDX1P47902 AL158840.1-201ENST00000414132 523 ntTSL 3 BASIC2.73□□□□□ -1.97
CDX1P47902 MTND3P17-201ENST00000416968 344 ntBASIC2.73□□□□□ -1.97
CDX1P47902 ATP2B2-IT2-201ENST00000419591 507 ntTSL 2 BASIC2.73□□□□□ -1.97
CDX1P47902 AL109913.1-201ENST00000421173 514 ntBASIC2.73□□□□□ -1.97
CDX1P47902 BPY2DP-201ENST00000422208 265 ntBASIC2.73□□□□□ -1.97
CDX1P47902 AC005300.1-201ENST00000428401 373 ntBASIC2.73□□□□□ -1.97
CDX1P47902 HMGB1P9-201ENST00000429856 646 ntBASIC2.73□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 125.3 ms