Protein–RNA interactions for Protein: P35499

SCN4A, Sodium channel protein type 4 subunit alpha, humanhuman

Predictions only

Length 1,836 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4AP35499 RPL35AP22-201ENST00000436855 335 ntBASIC2.12□□□□□ -2.07
SCN4AP35499 ACBD3-AS1-201ENST00000440540 535 ntTSL 5 BASIC2.12□□□□□ -2.07
SCN4AP35499 AL358794.1-201ENST00000445689 381 ntBASIC2.12□□□□□ -2.07
SCN4AP35499 AL445488.1-201ENST00000457272 706 ntTSL 5 BASIC2.12□□□□□ -2.07
SCN4AP35499 USP9YP25-201ENST00000457708 443 ntBASIC2.12□□□□□ -2.07
SCN4AP35499 NCOR1P1-201ENST00000478176 406 ntTSL 1 (best) BASIC2.12□□□□□ -2.07
SCN4AP35499 AC119751.4-201ENST00000507498 357 ntBASIC2.12□□□□□ -2.07
SCN4AP35499 AC113347.3-201ENST00000509113 148 ntBASIC2.12□□□□□ -2.07
SCN4AP35499 RNU1-40P-201ENST00000516816 164 ntBASIC2.12□□□□□ -2.07
SCN4AP35499 RNU1-97P-201ENST00000516872 164 ntBASIC2.12□□□□□ -2.07
SCN4AP35499 AC022360.2-202ENST00000517308 407 ntTSL 3 BASIC2.12□□□□□ -2.07
SCN4AP35499 CBX3P4-201ENST00000538909 354 ntBASIC2.12□□□□□ -2.07
SCN4AP35499 AC004943.1-202ENST00000558618 503 ntTSL 3 BASIC2.12□□□□□ -2.07
SCN4AP35499 MMP2-AS1-201ENST00000565307 593 ntTSL 4 BASIC2.12□□□□□ -2.07
SCN4AP35499 AC018554.1-201ENST00000565506 800 ntTSL 2 BASIC2.12□□□□□ -2.07
SCN4AP35499 AP005057.1-201ENST00000583827 574 ntTSL 4 BASIC2.12□□□□□ -2.07
SCN4AP35499 AL157392.4-201ENST00000609756 345 ntBASIC2.12□□□□□ -2.07
SCN4AP35499 C3orf49-203ENST00000616659 876 ntAPPRIS ALT2 TSL 5 BASIC2.12□□□□□ -2.07
SCN4AP35499 AC022306.3-201ENST00000619930 550 ntBASIC2.12□□□□□ -2.07
SCN4AP35499 Hammerhead_HH10.1-201ENST00000620658 125 ntBASIC2.12□□□□□ -2.07
SCN4AP35499 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC2.12□□□□□ -2.07
SCN4AP35499 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC2.12□□□□□ -2.07
SCN4AP35499 CDR1-202ENST00000625883 1485 ntBASIC2.11□□□□□ -2.07
SCN4AP35499 LINC01592-202ENST00000518540 2367 ntTSL 2 BASIC2.11□□□□□ -2.07
SCN4AP35499 SPINT4-201ENST00000279058 512 ntAPPRIS P1 TSL 1 (best) BASIC2.11□□□□□ -2.07
SCN4AP35499 Y_RNA.112-201ENST00000363250 102 ntBASIC2.11□□□□□ -2.07
SCN4AP35499 DEFB109C-201ENST00000382575 264 ntBASIC2.11□□□□□ -2.07
SCN4AP35499 DEFB109B-201ENST00000382656 264 ntBASIC2.11□□□□□ -2.07
SCN4AP35499 RNU6-339P-201ENST00000384310 107 ntBASIC2.11□□□□□ -2.07
SCN4AP35499 RNU6-925P-201ENST00000384629 104 ntBASIC2.11□□□□□ -2.07
SCN4AP35499 RPS3AP24-201ENST00000407896 734 ntBASIC2.11□□□□□ -2.07
SCN4AP35499 RNU2-20P-201ENST00000410425 191 ntBASIC2.11□□□□□ -2.07
SCN4AP35499 MTATP6P20-201ENST00000414147 562 ntBASIC2.11□□□□□ -2.07
SCN4AP35499 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC2.11□□□□□ -2.07
SCN4AP35499 TCF7L1-IT1-201ENST00000433581 458 ntTSL 3 BASIC2.11□□□□□ -2.07
SCN4AP35499 AC009238.1-201ENST00000442165 424 ntBASIC2.11□□□□□ -2.07
SCN4AP35499 AC009237.6-201ENST00000446969 424 ntBASIC2.11□□□□□ -2.07
SCN4AP35499 GJE1-201ENST00000450456 916 ntAPPRIS P1 TSL 5 BASIC2.11□□□□□ -2.07
SCN4AP35499 AC025033.1-201ENST00000463883 194 ntBASIC2.11□□□□□ -2.07
SCN4AP35499 MTCO3P35-201ENST00000485582 781 ntBASIC2.11□□□□□ -2.07
SCN4AP35499 LINC02447-203ENST00000504402 292 ntTSL 3 BASIC2.11□□□□□ -2.07
SCN4AP35499 AC097521.1-201ENST00000505488 567 ntTSL 3 BASIC2.11□□□□□ -2.07
SCN4AP35499 LINC02562-201ENST00000561705 785 ntTSL 2 BASIC2.11□□□□□ -2.07
SCN4AP35499 MIR4452-201ENST00000583004 71 ntBASIC2.11□□□□□ -2.07
SCN4AP35499 AL669831.4-202ENST00000590817 238 ntBASIC2.11□□□□□ -2.07
SCN4AP35499 AC245036.5-201ENST00000596330 847 ntBASIC2.11□□□□□ -2.07
SCN4AP35499 AC019159.1-201ENST00000605094 187 ntBASIC2.11□□□□□ -2.07
SCN4AP35499 AC093838.1-201ENST00000613014 469 ntBASIC2.11□□□□□ -2.07
SCN4AP35499 MTND2P41-201ENST00000637599 773 ntBASIC2.11□□□□□ -2.07
SCN4AP35499 AC091534.1-201ENST00000548779 1751 ntTSL 2 BASIC2.11□□□□□ -2.07
SCN4AP35499 CEP57L1-203ENST00000368970 1680 ntAPPRIS ALT2 TSL 5 BASIC2.11□□□□□ -2.07
SCN4AP35499 MUC15-204ENST00000527569 1386 ntTSL 1 (best) BASIC2.11□□□□□ -2.07
SCN4AP35499 RNU6-224P-201ENST00000384055 107 ntBASIC2.1□□□□□ -2.07
SCN4AP35499 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC2.1□□□□□ -2.07
SCN4AP35499 AC234781.2-201ENST00000426370 994 ntBASIC2.1□□□□□ -2.07
SCN4AP35499 HMGB1P12-201ENST00000438594 598 ntBASIC2.1□□□□□ -2.07
SCN4AP35499 AC004854.1-201ENST00000440356 349 ntBASIC2.1□□□□□ -2.07
SCN4AP35499 SSXP1-201ENST00000453640 473 ntBASIC2.1□□□□□ -2.07
SCN4AP35499 AC080013.2-201ENST00000460866 323 ntBASIC2.1□□□□□ -2.07
SCN4AP35499 AC069528.1-202ENST00000482888 637 ntBASIC2.1□□□□□ -2.07
SCN4AP35499 AC010273.1-201ENST00000504129 946 ntTSL 5 BASIC2.1□□□□□ -2.07
SCN4AP35499 HMGB1P22-201ENST00000505315 124 ntBASIC2.1□□□□□ -2.07
SCN4AP35499 HSPE1P23-201ENST00000509838 286 ntBASIC2.1□□□□□ -2.07
SCN4AP35499 AC109464.2-201ENST00000510242 943 ntBASIC2.1□□□□□ -2.07
SCN4AP35499 AC022483.1-201ENST00000514020 567 ntBASIC2.1□□□□□ -2.07
SCN4AP35499 RNU6-1282P-201ENST00000516735 96 ntBASIC2.1□□□□□ -2.07
SCN4AP35499 AC022690.1-201ENST00000526681 550 ntBASIC2.1□□□□□ -2.07
SCN4AP35499 AL355076.2-202ENST00000553754 574 ntTSL 4 BASIC2.1□□□□□ -2.07
SCN4AP35499 AC016987.2-201ENST00000560696 351 ntTSL 3 BASIC2.1□□□□□ -2.07
SCN4AP35499 AC027458.1-201ENST00000563639 613 ntTSL 1 (best) BASIC2.1□□□□□ -2.07
SCN4AP35499 AC098848.2-201ENST00000588023 330 ntBASIC2.1□□□□□ -2.07
SCN4AP35499 GLUD1P4-201ENST00000590914 418 ntBASIC2.1□□□□□ -2.07
SCN4AP35499 MIR8081-201ENST00000611533 95 ntBASIC2.1□□□□□ -2.07
SCN4AP35499 MIR6076-201ENST00000617521 113 ntBASIC2.1□□□□□ -2.07
SCN4AP35499 ZNF461-214ENST00000618437 774 ntTSL 5 BASIC2.1□□□□□ -2.07
SCN4AP35499 AC068631.1-219ENST00000625826 668 ntTSL 5 BASIC2.1□□□□□ -2.07
SCN4AP35499 MLF1-203ENST00000392822 2157 ntTSL 5 BASIC2.1□□□□□ -2.07
SCN4AP35499 MTND5P35-201ENST00000557537 1720 ntBASIC2.1□□□□□ -2.07
SCN4AP35499 RNU6-989P-201ENST00000362756 107 ntBASIC2.1□□□□□ -2.07
SCN4AP35499 RNU4-28P-201ENST00000364739 141 ntBASIC2.1□□□□□ -2.07
SCN4AP35499 MT-TC-201ENST00000387405 66 ntBASIC2.1□□□□□ -2.07
SCN4AP35499 RNU6-952P-201ENST00000391164 108 ntBASIC2.1□□□□□ -2.07
SCN4AP35499 MTND1P21-201ENST00000412991 285 ntBASIC2.1□□□□□ -2.07
SCN4AP35499 AC092634.6-201ENST00000418558 192 ntBASIC2.1□□□□□ -2.07
SCN4AP35499 MTCO2P5-201ENST00000422621 426 ntBASIC2.1□□□□□ -2.07
SCN4AP35499 AL354692.1-201ENST00000423044 315 ntBASIC2.1□□□□□ -2.07
SCN4AP35499 C1DP1-201ENST00000426049 402 ntBASIC2.1□□□□□ -2.07
SCN4AP35499 GSAP-208ENST00000441833 737 ntTSL 1 (best) BASIC2.1□□□□□ -2.07
SCN4AP35499 MTCYBP11-201ENST00000447254 1109 ntBASIC2.1□□□□□ -2.07
SCN4AP35499 AC010976.1-211ENST00000454503 644 ntTSL 2 BASIC2.1□□□□□ -2.07
SCN4AP35499 PPP1R2P5-201ENST00000457256 603 ntBASIC2.1□□□□□ -2.07
SCN4AP35499 TOMM22P6-201ENST00000465035 409 ntBASIC2.1□□□□□ -2.07
SCN4AP35499 AC108729.1-201ENST00000487812 947 ntBASIC2.1□□□□□ -2.07
SCN4AP35499 PIH1D2-206ENST00000528775 1025 ntTSL 5 BASIC2.1□□□□□ -2.07
SCN4AP35499 AC125611.2-201ENST00000551907 647 ntBASIC2.1□□□□□ -2.07
SCN4AP35499 TIMM9-208ENST00000556007 746 ntTSL 3 BASIC2.1□□□□□ -2.07
SCN4AP35499 MIR3921-201ENST00000577308 85 ntBASIC2.1□□□□□ -2.07
SCN4AP35499 AC092953.2-201ENST00000608000 699 ntBASIC2.1□□□□□ -2.07
SCN4AP35499 AC107075.1-201ENST00000613695 314 ntBASIC2.1□□□□□ -2.07
SCN4AP35499 OR5H6-201ENST00000615035 1113 ntAPPRIS P1 BASIC2.1□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 115.3 ms