Protein–RNA interactions for Protein: P35244

RPA3, Replication protein A 14 kDa subunit, humanhuman

Predicted RBP Predictions only

Length 121 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPA3P35244 AC006499.2-201ENST00000513470 337 ntBASIC1.93□□□□□ -2.1
RPA3P35244 AP005902.1-201ENST00000521358 186 ntBASIC1.93□□□□□ -2.1
RPA3P35244 AP003497.1-201ENST00000528472 562 ntBASIC1.93□□□□□ -2.1
RPA3P35244 AC104072.1-201ENST00000568817 668 ntBASIC1.93□□□□□ -2.1
RPA3P35244 BBIP1P1-201ENST00000602999 279 ntBASIC1.93□□□□□ -2.1
RPA3P35244 AC069545.1-201ENST00000605671 358 ntBASIC1.93□□□□□ -2.1
RPA3P35244 AL021997.1-201ENST00000605757 193 ntBASIC1.93□□□□□ -2.1
RPA3P35244 OR5B3-202ENST00000641865 1046 ntAPPRIS P1 BASIC1.93□□□□□ -2.1
RPA3P35244 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC1.92□□□□□ -2.1
RPA3P35244 HSFY2-201ENST00000304790 1444 ntAPPRIS P5 TSL 1 (best) BASIC1.92□□□□□ -2.1
RPA3P35244 HSFY1-201ENST00000307393 1444 ntAPPRIS P5 TSL 1 (best) BASIC1.92□□□□□ -2.1
RPA3P35244 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC1.92□□□□□ -2.1
RPA3P35244 RNU6-97P-201ENST00000363387 104 ntBASIC1.92□□□□□ -2.1
RPA3P35244 RNA5SP125-201ENST00000364843 120 ntBASIC1.92□□□□□ -2.1
RPA3P35244 RNU6-359P-201ENST00000365466 108 ntBASIC1.92□□□□□ -2.1
RPA3P35244 SNRPE-201ENST00000367208 355 ntTSL 2 BASIC1.92□□□□□ -2.1
RPA3P35244 RNU6-1207P-201ENST00000384343 107 ntBASIC1.92□□□□□ -2.1
RPA3P35244 RNU6-114P-201ENST00000384704 105 ntBASIC1.92□□□□□ -2.1
RPA3P35244 USP9YP19-201ENST00000412165 485 ntBASIC1.92□□□□□ -2.1
RPA3P35244 LINC01737-201ENST00000412647 403 ntTSL 1 (best) BASIC1.92□□□□□ -2.1
RPA3P35244 AC096649.2-201ENST00000416186 393 ntBASIC1.92□□□□□ -2.1
RPA3P35244 USP9YP13-201ENST00000417797 480 ntBASIC1.92□□□□□ -2.1
RPA3P35244 AC007435.1-201ENST00000421086 415 ntBASIC1.92□□□□□ -2.1
RPA3P35244 MTND4P6-201ENST00000438297 472 ntBASIC1.92□□□□□ -2.1
RPA3P35244 ARPC3P5-201ENST00000448802 534 ntBASIC1.92□□□□□ -2.1
RPA3P35244 UTAT33-202ENST00000449177 565 ntTSL 2 BASIC1.92□□□□□ -2.1
RPA3P35244 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC1.92□□□□□ -2.1
RPA3P35244 AL365273.2-201ENST00000491114 492 ntAPPRIS P1 TSL 5 BASIC1.92□□□□□ -2.1
RPA3P35244 DEFB130C-202ENST00000530001 230 ntBASIC1.92□□□□□ -2.1
RPA3P35244 RANP3-201ENST00000530970 276 ntBASIC1.92□□□□□ -2.1
RPA3P35244 BLOC1S6-207ENST00000565216 573 ntTSL 3 BASIC1.92□□□□□ -2.1
RPA3P35244 MIR3912-201ENST00000577566 105 ntBASIC1.92□□□□□ -2.1
RPA3P35244 AC097467.3-208ENST00000593486 670 ntTSL 5 BASIC1.92□□□□□ -2.1
RPA3P35244 AL450336.1-201ENST00000605180 586 ntBASIC1.92□□□□□ -2.1
RPA3P35244 AC008759.3-201ENST00000613300 508 ntBASIC1.92□□□□□ -2.1
RPA3P35244 YWHAEP7-203ENST00000622054 312 ntBASIC1.92□□□□□ -2.1
RPA3P35244 AC019226.1-201ENST00000625666 515 ntBASIC1.92□□□□□ -2.1
RPA3P35244 LINC01592-202ENST00000518540 2367 ntTSL 2 BASIC1.92□□□□□ -2.1
RPA3P35244 RRAS2-211ENST00000537760 2034 ntTSL 2 BASIC1.91□□□□□ -2.1
RPA3P35244 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC1.91□□□□□ -2.1
RPA3P35244 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC1.91□□□□□ -2.1
RPA3P35244 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC1.91□□□□□ -2.1
RPA3P35244 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC1.91□□□□□ -2.1
RPA3P35244 VIM-AS1-201ENST00000437232 1351 ntTSL 2 BASIC1.91□□□□□ -2.1
RPA3P35244 COMMD6-201ENST00000355801 486 ntTSL 2 BASIC1.91□□□□□ -2.1
RPA3P35244 RNA5SP88-201ENST00000365560 109 ntBASIC1.91□□□□□ -2.1
RPA3P35244 C1D-204ENST00000410067 736 ntAPPRIS P1 TSL 1 (best) BASIC1.91□□□□□ -2.1
RPA3P35244 RNU2-20P-201ENST00000410425 191 ntBASIC1.91□□□□□ -2.1
RPA3P35244 RNU6-516P-201ENST00000411381 104 ntBASIC1.91□□□□□ -2.1
RPA3P35244 NPM1P11-201ENST00000417106 855 ntBASIC1.91□□□□□ -2.1
RPA3P35244 Z75741.2-201ENST00000417272 1167 ntBASIC1.91□□□□□ -2.1
RPA3P35244 MRPS36P1-201ENST00000421291 307 ntBASIC1.91□□□□□ -2.1
RPA3P35244 AL162726.4-201ENST00000422010 673 ntTSL 5 BASIC1.91□□□□□ -2.1
RPA3P35244 OOSP1P1-201ENST00000423265 274 ntBASIC1.91□□□□□ -2.1
RPA3P35244 LINC01817-201ENST00000429317 564 ntTSL 4 BASIC1.91□□□□□ -2.1
RPA3P35244 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC1.91□□□□□ -2.1
RPA3P35244 AC018693.1-201ENST00000442829 550 ntTSL 4 BASIC1.91□□□□□ -2.1
RPA3P35244 AC017099.1-201ENST00000448261 1028 ntBASIC1.91□□□□□ -2.1
RPA3P35244 RN7SL429P-201ENST00000479090 223 ntBASIC1.91□□□□□ -2.1
RPA3P35244 RN7SL489P-201ENST00000486185 223 ntBASIC1.91□□□□□ -2.1
RPA3P35244 RN7SL327P-201ENST00000488659 223 ntBASIC1.91□□□□□ -2.1
RPA3P35244 LINC02174-201ENST00000508977 553 ntTSL 3 BASIC1.91□□□□□ -2.1
RPA3P35244 LTV1P1-201ENST00000510683 1237 ntBASIC1.91□□□□□ -2.1
RPA3P35244 RNU1-41P-201ENST00000516161 162 ntBASIC1.91□□□□□ -2.1
RPA3P35244 RNU1-48P-201ENST00000516400 162 ntBASIC1.91□□□□□ -2.1
RPA3P35244 SCARNA3-201ENST00000517097 143 ntBASIC1.91□□□□□ -2.1
RPA3P35244 ZKSCAN7P1-201ENST00000543668 673 ntBASIC1.91□□□□□ -2.1
RPA3P35244 OR6C7P-201ENST00000547875 934 ntBASIC1.91□□□□□ -2.1
RPA3P35244 LINC2194-202ENST00000567624 506 ntTSL 3 BASIC1.91□□□□□ -2.1
RPA3P35244 AL357094.1-201ENST00000603845 844 ntBASIC1.91□□□□□ -2.1
RPA3P35244 AL589740.1-208ENST00000606913 812 ntTSL 5 BASIC1.91□□□□□ -2.1
RPA3P35244 AL021368.1-201ENST00000607490 540 ntBASIC1.91□□□□□ -2.1
RPA3P35244 AC087241.4-201ENST00000612441 480 ntBASIC1.91□□□□□ -2.1
RPA3P35244 AC023158.2-201ENST00000614876 543 ntBASIC1.91□□□□□ -2.1
RPA3P35244 RN7SL853P-201ENST00000617250 223 ntBASIC1.91□□□□□ -2.1
RPA3P35244 AL449363.1-201ENST00000617815 186 ntBASIC1.91□□□□□ -2.1
RPA3P35244 AC244517.12-201ENST00000623581 663 ntBASIC1.91□□□□□ -2.1
RPA3P35244 CBLL1-201ENST00000222597 2003 ntAPPRIS ALT1 TSL 1 (best) BASIC1.91□□□□□ -2.1
RPA3P35244 MTND5P29-201ENST00000458676 1807 ntBASIC1.91□□□□□ -2.1
RPA3P35244 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC1.91□□□□□ -2.1
RPA3P35244 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC1.9□□□□□ -2.1
RPA3P35244 HTN1-201ENST00000246896 580 ntAPPRIS P1 TSL 1 (best) BASIC1.9□□□□□ -2.11
RPA3P35244 FAM133CP-201ENST00000332869 704 ntBASIC1.9□□□□□ -2.11
RPA3P35244 SNORA16B-201ENST00000364674 135 ntBASIC1.9□□□□□ -2.11
RPA3P35244 TXNP7-201ENST00000406296 293 ntBASIC1.9□□□□□ -2.11
RPA3P35244 SNORD23.1-201ENST00000408212 104 ntBASIC1.9□□□□□ -2.11
RPA3P35244 RNU4-26P-201ENST00000410270 107 ntBASIC1.9□□□□□ -2.11
RPA3P35244 VN1R51P-201ENST00000411675 945 ntBASIC1.9□□□□□ -2.11
RPA3P35244 EIF1AXP1-201ENST00000419267 435 ntBASIC1.9□□□□□ -2.11
RPA3P35244 ERMN-209ENST00000420719 1246 ntTSL 2 BASIC1.9□□□□□ -2.11
RPA3P35244 SKA2P1-201ENST00000425592 390 ntBASIC1.9□□□□□ -2.11
RPA3P35244 AL139118.1-201ENST00000432707 446 ntTSL 3 BASIC1.9□□□□□ -2.11
RPA3P35244 AL360169.1-201ENST00000435116 143 ntTSL 5 BASIC1.9□□□□□ -2.11
RPA3P35244 SNRPEP9-201ENST00000436794 238 ntBASIC1.9□□□□□ -2.11
RPA3P35244 SPANXN4-202ENST00000446864 431 ntAPPRIS P2 TSL 1 (best) BASIC1.9□□□□□ -2.11
RPA3P35244 AL109763.1-201ENST00000455391 461 ntTSL 2 BASIC1.9□□□□□ -2.11
RPA3P35244 AC092422.1-201ENST00000455576 584 ntTSL 4 BASIC1.9□□□□□ -2.11
RPA3P35244 AC108734.3-201ENST00000481241 1165 ntBASIC1.9□□□□□ -2.11
RPA3P35244 AC021382.1-201ENST00000483523 359 ntBASIC1.9□□□□□ -2.11
RPA3P35244 AC092902.1-201ENST00000486999 259 ntBASIC1.9□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 90.1 ms