Protein–RNA interactions for Protein: P31270

HOXA11, Homeobox protein Hox-A11, humanhuman

Predicted RBP Predictions only

Length 313 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA11P31270 FAM107B-204ENST00000378465 1052 ntAPPRIS P1 TSL 2 BASIC3.55□□□□□ -1.84
HOXA11P31270 RNU6-1207P-201ENST00000384343 107 ntBASIC3.55□□□□□ -1.84
HOXA11P31270 MT-TD-201ENST00000387419 68 ntBASIC3.55□□□□□ -1.84
HOXA11P31270 U3.20-201ENST00000390909 217 ntBASIC3.55□□□□□ -1.84
HOXA11P31270 Z92545.1-201ENST00000411782 234 ntBASIC3.55□□□□□ -1.84
HOXA11P31270 AC114763.2-201ENST00000412593 826 ntTSL 2 BASIC3.55□□□□□ -1.84
HOXA11P31270 AC019097.1-201ENST00000424783 735 ntBASIC3.55□□□□□ -1.84
HOXA11P31270 AC069257.1-202ENST00000425275 422 ntTSL 3 BASIC3.55□□□□□ -1.84
HOXA11P31270 AC007879.4-201ENST00000440545 361 ntTSL 3 BASIC3.55□□□□□ -1.84
HOXA11P31270 SNRPGP6-201ENST00000451124 220 ntBASIC3.55□□□□□ -1.84
HOXA11P31270 MTUS2-AS2-203ENST00000452602 651 ntTSL 3 BASIC3.55□□□□□ -1.84
HOXA11P31270 SNORD121B-201ENST00000458838 81 ntBASIC3.55□□□□□ -1.84
HOXA11P31270 AC109925.1-201ENST00000478069 331 ntBASIC3.55□□□□□ -1.84
HOXA11P31270 AC021382.1-201ENST00000483523 359 ntBASIC3.55□□□□□ -1.84
HOXA11P31270 AC008883.2-201ENST00000505796 414 ntTSL 3 BASIC3.55□□□□□ -1.84
HOXA11P31270 AC018710.1-201ENST00000506509 158 ntBASIC3.55□□□□□ -1.84
HOXA11P31270 NAF1-205ENST00000509434 385 ntTSL 3 BASIC3.55□□□□□ -1.84
HOXA11P31270 SLC7A11-AS1-201ENST00000510066 817 ntTSL 2 BASIC3.55□□□□□ -1.84
HOXA11P31270 AC131956.2-201ENST00000510922 512 ntTSL 3 BASIC3.55□□□□□ -1.84
HOXA11P31270 MTND3P22-201ENST00000510932 243 ntBASIC3.55□□□□□ -1.84
HOXA11P31270 AC008700.1-202ENST00000513657 468 ntTSL 5 BASIC3.55□□□□□ -1.84
HOXA11P31270 AC107934.2-201ENST00000518653 310 ntBASIC3.55□□□□□ -1.84
HOXA11P31270 AC084116.3-201ENST00000519123 429 ntTSL 3 BASIC3.55□□□□□ -1.84
HOXA11P31270 IGHV3-76-201ENST00000522465 295 ntBASIC3.55□□□□□ -1.84
HOXA11P31270 CENPUP1-201ENST00000526649 1202 ntBASIC3.55□□□□□ -1.84
HOXA11P31270 AL359233.1-201ENST00000554029 364 ntTSL 3 BASIC3.55□□□□□ -1.84
HOXA11P31270 MEG8-218ENST00000556720 456 ntTSL 3 BASIC3.55□□□□□ -1.84
HOXA11P31270 AC044873.1-201ENST00000580487 399 ntTSL 3 BASIC3.55□□□□□ -1.84
HOXA11P31270 AC097467.3-205ENST00000597955 594 ntTSL 5 BASIC3.55□□□□□ -1.84
HOXA11P31270 AL160281.1-201ENST00000605307 311 ntBASIC3.55□□□□□ -1.84
HOXA11P31270 uc_338.12-201ENST00000616344 181 ntBASIC3.55□□□□□ -1.84
HOXA11P31270 AC002076.2-201ENST00000617362 122 ntBASIC3.55□□□□□ -1.84
HOXA11P31270 SNORD39.4-201ENST00000620099 78 ntBASIC3.55□□□□□ -1.84
HOXA11P31270 AC011460.1-201ENST00000636268 1834 ntBASIC3.55□□□□□ -1.84
HOXA11P31270 ERBIN-214ENST00000511297 4257 ntAPPRIS ALT1 TSL 5 BASIC3.55□□□□□ -1.84
HOXA11P31270 KIAA1841-211ENST00000612149 4202 ntTSL 5 BASIC3.55□□□□□ -1.84
HOXA11P31270 AC092326.2-201ENST00000624772 1561 ntBASIC3.55□□□□□ -1.84
HOXA11P31270 AC100800.1-201ENST00000524252 2054 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
HOXA11P31270 HDX-202ENST00000373177 2924 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
HOXA11P31270 MTND4P29-201ENST00000503122 1372 ntBASIC3.54□□□□□ -1.84
HOXA11P31270 OSTN-202ENST00000445281 3134 ntTSL 5 BASIC3.54□□□□□ -1.84
HOXA11P31270 AL158064.1-201ENST00000627044 2242 ntTSL 4 BASIC3.54□□□□□ -1.84
HOXA11P31270 FKTN-204ENST00000448551 1700 ntTSL 2 BASIC3.54□□□□□ -1.84
HOXA11P31270 SNORA20.2-201ENST00000383922 131 ntBASIC3.54□□□□□ -1.84
HOXA11P31270 Y_RNA.509-201ENST00000384506 99 ntBASIC3.54□□□□□ -1.84
HOXA11P31270 SNORA48.5-201ENST00000391143 135 ntBASIC3.54□□□□□ -1.84
HOXA11P31270 RNU1-101P-201ENST00000391171 127 ntBASIC3.54□□□□□ -1.84
HOXA11P31270 RPL23AP82-202ENST00000427528 469 ntBASIC3.54□□□□□ -1.84
HOXA11P31270 GTF2IP20-201ENST00000431663 360 ntBASIC3.54□□□□□ -1.84
HOXA11P31270 RPL7P54-201ENST00000438336 674 ntBASIC3.54□□□□□ -1.84
HOXA11P31270 HMGB3P12-201ENST00000438745 556 ntBASIC3.54□□□□□ -1.84
HOXA11P31270 AC007003.1-202ENST00000439318 349 ntTSL 5 BASIC3.54□□□□□ -1.84
HOXA11P31270 SEPT14P3-201ENST00000439401 183 ntBASIC3.54□□□□□ -1.84
HOXA11P31270 AL732372.2-207ENST00000445840 183 ntBASIC3.54□□□□□ -1.84
HOXA11P31270 LINC01810-201ENST00000450397 411 ntTSL 3 BASIC3.54□□□□□ -1.84
HOXA11P31270 SEPT14P2-201ENST00000453405 183 ntBASIC3.54□□□□□ -1.84
HOXA11P31270 AC011998.3-201ENST00000457053 254 ntTSL 3 BASIC3.54□□□□□ -1.84
HOXA11P31270 PMCHL2-203ENST00000457791 237 ntBASIC3.54□□□□□ -1.84
HOXA11P31270 AC022364.2-201ENST00000457963 554 ntBASIC3.54□□□□□ -1.84
HOXA11P31270 snoU13.8-201ENST00000458890 104 ntBASIC3.54□□□□□ -1.84
HOXA11P31270 CENPBD1P1-201ENST00000464061 469 ntBASIC3.54□□□□□ -1.84
HOXA11P31270 PCBP2P3-201ENST00000509726 843 ntBASIC3.54□□□□□ -1.84
HOXA11P31270 AC096711.2-201ENST00000510592 454 ntTSL 5 BASIC3.54□□□□□ -1.84
HOXA11P31270 AC008871.1-201ENST00000510935 398 ntTSL 3 BASIC3.54□□□□□ -1.84
HOXA11P31270 IL7R-208ENST00000511982 612 ntTSL 2 BASIC3.54□□□□□ -1.84
HOXA11P31270 SEPT14P4-201ENST00000513445 186 ntBASIC3.54□□□□□ -1.84
HOXA11P31270 RNU6-711P-201ENST00000517255 106 ntBASIC3.54□□□□□ -1.84
HOXA11P31270 ERHP1-201ENST00000523006 310 ntBASIC3.54□□□□□ -1.84
HOXA11P31270 AC099520.1-206ENST00000523434 486 ntTSL 3 BASIC3.54□□□□□ -1.84
HOXA11P31270 FO082796.1-201ENST00000523795 183 ntBASIC3.54□□□□□ -1.84
HOXA11P31270 AC092747.1-201ENST00000538920 351 ntTSL 5 BASIC3.54□□□□□ -1.84
HOXA11P31270 GLYCAM1-201ENST00000546596 285 ntBASIC3.54□□□□□ -1.84
HOXA11P31270 OR4T1P-201ENST00000554933 911 ntBASIC3.54□□□□□ -1.84
HOXA11P31270 AC009145.3-201ENST00000567386 476 ntTSL 3 BASIC3.54□□□□□ -1.84
HOXA11P31270 HMGB1P6-201ENST00000569046 646 ntBASIC3.54□□□□□ -1.84
HOXA11P31270 MIR3186-201ENST00000577404 85 ntBASIC3.54□□□□□ -1.84
HOXA11P31270 COX6CP3-201ENST00000580869 223 ntBASIC3.54□□□□□ -1.84
HOXA11P31270 AC025449.1-201ENST00000603896 529 ntBASIC3.54□□□□□ -1.84
HOXA11P31270 AC008962.1-201ENST00000605729 304 ntBASIC3.54□□□□□ -1.84
HOXA11P31270 RMST_3.1-201ENST00000611651 109 ntBASIC3.54□□□□□ -1.84
HOXA11P31270 RNVU1-4-201ENST00000612985 164 ntBASIC3.54□□□□□ -1.84
HOXA11P31270 AC009233.1-201ENST00000616477 371 ntBASIC3.54□□□□□ -1.84
HOXA11P31270 AL136221.1-201ENST00000621449 509 ntBASIC3.54□□□□□ -1.84
HOXA11P31270 AC006111.3-201ENST00000622137 383 ntBASIC3.54□□□□□ -1.84
HOXA11P31270 AC079597.1-201ENST00000624306 508 ntBASIC3.54□□□□□ -1.84
HOXA11P31270 TTN-AS1-263ENST00000627527 784 ntTSL 5 BASIC3.54□□□□□ -1.84
HOXA11P31270 AC099654.10-201ENST00000640395 161 ntBASIC3.54□□□□□ -1.84
HOXA11P31270 KNTC1-201ENST00000333479 6975 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
HOXA11P31270 CUL2-206ENST00000421317 2376 ntTSL 2 BASIC3.54□□□□□ -1.84
HOXA11P31270 AC118273.1-201ENST00000525324 3006 ntBASIC3.54□□□□□ -1.84
HOXA11P31270 FRYL-205ENST00000503238 11103 ntAPPRIS P1 TSL 5 BASIC3.53□□□□□ -1.84
HOXA11P31270 SERPINI2-209ENST00000616363 1769 ntTSL 5 BASIC3.53□□□□□ -1.84
HOXA11P31270 AL138713.1-201ENST00000624026 2130 ntBASIC3.53□□□□□ -1.84
HOXA11P31270 FIGNL1-212ENST00000613602 3187 ntAPPRIS P1 TSL 5 BASIC3.53□□□□□ -1.84
HOXA11P31270 SLC38A9-201ENST00000318672 2369 ntAPPRIS P1 TSL 2 BASIC3.53□□□□□ -1.84
HOXA11P31270 KIAA1107-203ENST00000637221 4337 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
HOXA11P31270 RNU6-173P-201ENST00000364215 104 ntBASIC3.53□□□□□ -1.84
HOXA11P31270 C1orf100-202ENST00000366537 483 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
HOXA11P31270 RNU6-1158P-201ENST00000391167 107 ntBASIC3.53□□□□□ -1.84
HOXA11P31270 U3.29-201ENST00000391296 212 ntBASIC3.53□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 126.8 ms