Protein–RNA interactions for Protein: P28702

RXRB, Retinoic acid receptor RXR-beta, humanhuman

Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RXRBP28702 RNU6-823P-201ENST00000391042 103 ntBASIC5.23□□□□□ -1.57
RXRBP28702 MIR1911-201ENST00000410783 80 ntBASIC5.23□□□□□ -1.57
RXRBP28702 GPC5-AS1-201ENST00000419288 393 ntTSL 3 BASIC5.23□□□□□ -1.57
RXRBP28702 EIF4EP1-201ENST00000422311 642 ntBASIC5.23□□□□□ -1.57
RXRBP28702 AL117341.1-201ENST00000437213 373 ntTSL 5 BASIC5.23□□□□□ -1.57
RXRBP28702 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC5.23□□□□□ -1.57
RXRBP28702 RPS3AP46-201ENST00000448352 682 ntBASIC5.23□□□□□ -1.57
RXRBP28702 AL162388.1-201ENST00000450912 352 ntBASIC5.23□□□□□ -1.57
RXRBP28702 AC006511.1-201ENST00000470614 315 ntBASIC5.23□□□□□ -1.57
RXRBP28702 AC022795.1-201ENST00000473808 480 ntBASIC5.23□□□□□ -1.57
RXRBP28702 RN7SL271P-201ENST00000487601 295 ntBASIC5.23□□□□□ -1.57
RXRBP28702 AC021146.3-201ENST00000511911 260 ntBASIC5.23□□□□□ -1.57
RXRBP28702 RNU6-189P-201ENST00000516120 101 ntBASIC5.23□□□□□ -1.57
RXRBP28702 AC021698.1-201ENST00000524858 716 ntTSL 3 BASIC5.23□□□□□ -1.57
RXRBP28702 GNAI2P1-201ENST00000541815 315 ntBASIC5.23□□□□□ -1.57
RXRBP28702 LINC02490-201ENST00000559915 601 ntTSL 3 BASIC5.23□□□□□ -1.57
RXRBP28702 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC5.23□□□□□ -1.57
RXRBP28702 COX6CP3-201ENST00000580869 223 ntBASIC5.23□□□□□ -1.57
RXRBP28702 MIR3945-201ENST00000581853 98 ntBASIC5.23□□□□□ -1.57
RXRBP28702 RPL26-207ENST00000583011 524 ntAPPRIS P1 TSL 3 BASIC5.23□□□□□ -1.57
RXRBP28702 AL138686.1-201ENST00000612699 315 ntTSL 3 BASIC5.23□□□□□ -1.57
RXRBP28702 DLX6-AS1_2.1-201ENST00000613701 207 ntBASIC5.23□□□□□ -1.57
RXRBP28702 MIR6128-201ENST00000615528 109 ntBASIC5.23□□□□□ -1.57
RXRBP28702 AL360270.1-201ENST00000440689 2359 ntTSL 2 BASIC5.23□□□□□ -1.57
RXRBP28702 ETV1-203ENST00000403527 3363 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
RXRBP28702 AL022311.1-201ENST00000623726 19416 ntBASIC5.23□□□□□ -1.57
RXRBP28702 AL133383.2-201ENST00000622958 2336 ntBASIC5.23□□□□□ -1.57
RXRBP28702 NUP35-201ENST00000295119 1633 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
RXRBP28702 ATP2C1-212ENST00000507488 3579 ntAPPRIS ALT2 TSL 2 BASIC5.22□□□□□ -1.57
RXRBP28702 SLC24A2-202ENST00000341998 10749 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
RXRBP28702 SMAD4-202ENST00000398417 8495 ntAPPRIS P1 TSL 5 BASIC5.22□□□□□ -1.57
RXRBP28702 OR2AT4-205ENST00000641931 8357 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
RXRBP28702 UBR1-201ENST00000290650 7761 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
RXRBP28702 RGS21-201ENST00000417209 1794 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
RXRBP28702 ZNF705A-204ENST00000610508 3378 ntAPPRIS P1 TSL 5 BASIC5.22□□□□□ -1.57
RXRBP28702 AL157777.2-201ENST00000258070 137 ntBASIC5.22□□□□□ -1.57
RXRBP28702 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
RXRBP28702 RNU1-33P-201ENST00000364249 162 ntBASIC5.22□□□□□ -1.57
RXRBP28702 RNU6-1127P-201ENST00000384580 107 ntBASIC5.22□□□□□ -1.57
RXRBP28702 TRAV8-1-201ENST00000390430 473 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
RXRBP28702 TRAJ16-201ENST00000390521 60 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
RXRBP28702 MIR450B-201ENST00000401182 78 ntBASIC5.22□□□□□ -1.57
RXRBP28702 Y_RNA.594-201ENST00000410373 140 ntBASIC5.22□□□□□ -1.57
RXRBP28702 RNU6-1050P-201ENST00000410388 107 ntBASIC5.22□□□□□ -1.57
RXRBP28702 AC005300.1-201ENST00000428401 373 ntBASIC5.22□□□□□ -1.57
RXRBP28702 HMGB1P9-201ENST00000429856 646 ntBASIC5.22□□□□□ -1.57
RXRBP28702 SNAP23P1-201ENST00000433229 246 ntBASIC5.22□□□□□ -1.57
RXRBP28702 AC062032.1-201ENST00000436245 355 ntTSL 5 BASIC5.22□□□□□ -1.57
RXRBP28702 SFTA1P-203ENST00000446372 693 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
RXRBP28702 RPS15AP27-201ENST00000449183 343 ntBASIC5.22□□□□□ -1.57
RXRBP28702 RNU2-53P-201ENST00000516257 147 ntBASIC5.22□□□□□ -1.57
RXRBP28702 RNY3P15-201ENST00000516297 97 ntBASIC5.22□□□□□ -1.57
RXRBP28702 AC099520.1-208ENST00000518276 472 ntTSL 3 BASIC5.22□□□□□ -1.57
RXRBP28702 CLEC2D-214ENST00000543300 399 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
RXRBP28702 CLEC2D-216ENST00000545918 288 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
RXRBP28702 AL160237.1-201ENST00000554526 572 ntTSL 4 BASIC5.22□□□□□ -1.57
RXRBP28702 AC023510.1-201ENST00000555862 490 ntTSL 2 BASIC5.22□□□□□ -1.57
RXRBP28702 SNORD58B-201ENST00000607313 66 ntBASIC5.22□□□□□ -1.57
RXRBP28702 MIR8062-201ENST00000621515 85 ntBASIC5.22□□□□□ -1.57
RXRBP28702 U6.114-201ENST00000636407 96 ntBASIC5.22□□□□□ -1.57
RXRBP28702 KCNJ16-201ENST00000283936 4062 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
RXRBP28702 ING3-205ENST00000445699 1723 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
RXRBP28702 STARD9-201ENST00000290607 15567 ntAPPRIS P1 TSL 5 BASIC5.22□□□□□ -1.57
RXRBP28702 LINC02516-201ENST00000563724 1771 ntTSL 2 BASIC5.21□□□□□ -1.57
RXRBP28702 CMYA5-201ENST00000446378 12847 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.57
RXRBP28702 BMPR1B-203ENST00000440890 5388 ntTSL 2 BASIC5.21□□□□□ -1.58
RXRBP28702 NCOA1-202ENST00000348332 6895 ntAPPRIS P4 TSL 1 (best) BASIC5.21□□□□□ -1.58
RXRBP28702 SDHC-202ENST00000367975 13566 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
RXRBP28702 RNU6-562P-201ENST00000362731 107 ntBASIC5.21□□□□□ -1.58
RXRBP28702 RHOT1P2-201ENST00000366423 333 ntBASIC5.21□□□□□ -1.58
RXRBP28702 AC112721.2-201ENST00000409910 541 ntTSL 4 BASIC5.21□□□□□ -1.58
RXRBP28702 ATP5A1P2-201ENST00000412323 255 ntBASIC5.21□□□□□ -1.58
RXRBP28702 AL589987.2-201ENST00000417426 582 ntTSL 2 BASIC5.21□□□□□ -1.58
RXRBP28702 AC133106.1-201ENST00000419029 397 ntTSL 3 BASIC5.21□□□□□ -1.58
RXRBP28702 AC243428.1-201ENST00000421099 264 ntBASIC5.21□□□□□ -1.58
RXRBP28702 AC087650.1-201ENST00000431445 468 ntBASIC5.21□□□□□ -1.58
RXRBP28702 GPC6-AS2-201ENST00000445540 587 ntTSL 5 BASIC5.21□□□□□ -1.58
RXRBP28702 AL589765.3-201ENST00000446084 462 ntBASIC5.21□□□□□ -1.58
RXRBP28702 AC016696.1-201ENST00000446949 318 ntBASIC5.21□□□□□ -1.58
RXRBP28702 RPL7L1P1-201ENST00000448259 785 ntBASIC5.21□□□□□ -1.58
RXRBP28702 MTND1P19-201ENST00000511780 315 ntBASIC5.21□□□□□ -1.58
RXRBP28702 RNU4ATAC7P-201ENST00000516280 125 ntBASIC5.21□□□□□ -1.58
RXRBP28702 Y_RNA.708-201ENST00000516950 96 ntBASIC5.21□□□□□ -1.58
RXRBP28702 GYPA-211ENST00000535709 695 ntAPPRIS ALT2 TSL 1 (best) BASIC5.21□□□□□ -1.58
RXRBP28702 AC007375.1-201ENST00000554513 578 ntBASIC5.21□□□□□ -1.58
RXRBP28702 MIR4325-201ENST00000583049 90 ntBASIC5.21□□□□□ -1.58
RXRBP28702 AC011518.1-202ENST00000592668 407 ntTSL 5 BASIC5.21□□□□□ -1.58
RXRBP28702 LINC00310-205ENST00000609062 863 ntTSL 5 BASIC5.21□□□□□ -1.58
RXRBP28702 AL355810.1-201ENST00000614629 552 ntBASIC5.21□□□□□ -1.58
RXRBP28702 AC137590.2-201ENST00000619709 240 ntBASIC5.21□□□□□ -1.58
RXRBP28702 AL136313.1-201ENST00000624804 202 ntBASIC5.21□□□□□ -1.58
RXRBP28702 DLD-204ENST00000437604 1859 ntTSL 2 BASIC5.21□□□□□ -1.58
RXRBP28702 RNFT1-201ENST00000305783 2101 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
RXRBP28702 ATP2C1-205ENST00000504381 3498 ntTSL 2 BASIC5.21□□□□□ -1.58
RXRBP28702 GPR34-202ENST00000378142 1928 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
RXRBP28702 DHX9P1-201ENST00000436565 3076 ntBASIC5.2□□□□□ -1.58
RXRBP28702 ZNF639-206ENST00000484866 1730 ntAPPRIS P1 TSL 2 BASIC5.2□□□□□ -1.58
RXRBP28702 TPTE2P4-201ENST00000258589 1605 ntBASIC5.2□□□□□ -1.58
RXRBP28702 IBTK-209ENST00000510291 4109 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
RXRBP28702 PCLO-206ENST00000437081 3786 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 97.3 ms