Protein–RNA interactions for Protein: P26640

VARS, Valine--tRNA ligase, humanhuman

Known RBP Predictions only

Length 1,264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARSP26640 Y_RNA.571-201ENST00000384753 98 ntBASIC5.32□□□□□ -1.56
VARSP26640 UBA52P6-201ENST00000399822 382 ntBASIC5.32□□□□□ -1.56
VARSP26640 AL627311.1-201ENST00000431514 115 ntBASIC5.32□□□□□ -1.56
VARSP26640 AC009237.7-201ENST00000447357 229 ntBASIC5.32□□□□□ -1.56
VARSP26640 TPT1P12-201ENST00000448968 492 ntBASIC5.32□□□□□ -1.56
VARSP26640 COX7A2-205ENST00000460985 357 ntTSL 2 BASIC5.32□□□□□ -1.56
VARSP26640 AC005532.2-201ENST00000467154 373 ntBASIC5.32□□□□□ -1.56
VARSP26640 RPS4XP1-201ENST00000482189 787 ntBASIC5.32□□□□□ -1.56
VARSP26640 RPL23AP75-201ENST00000491601 451 ntBASIC5.32□□□□□ -1.56
VARSP26640 AC091912.1-201ENST00000511351 248 ntBASIC5.32□□□□□ -1.56
VARSP26640 UTS2-201ENST00000054668 420 ntAPPRIS P4 TSL 1 (best) BASIC5.32□□□□□ -1.56
VARSP26640 LINC01630-204ENST00000582689 539 ntTSL 4 BASIC5.32□□□□□ -1.56
VARSP26640 AC005702.2-201ENST00000591035 481 ntAPPRIS P1 TSL 3 BASIC5.32□□□□□ -1.56
VARSP26640 AC234771.5-201ENST00000600161 514 ntBASIC5.32□□□□□ -1.56
VARSP26640 SSX9-202ENST00000608568 580 ntTSL 4 BASIC5.32□□□□□ -1.56
VARSP26640 AC105265.3-202ENST00000610188 459 ntTSL 5 BASIC5.32□□□□□ -1.56
VARSP26640 GABRG2-202ENST00000361925 3767 ntTSL 3 BASIC5.32□□□□□ -1.56
VARSP26640 ZMYND11-217ENST00000627286 3914 ntTSL 5 BASIC5.32□□□□□ -1.56
VARSP26640 AGO3-203ENST00000373191 19687 ntAPPRIS P1 TSL 2 BASIC5.32□□□□□ -1.56
VARSP26640 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC5.32□□□□□ -1.56
VARSP26640 EHBP1-202ENST00000405015 4108 ntAPPRIS ALT2 TSL 2 BASIC5.31□□□□□ -1.56
VARSP26640 RGS17-202ENST00000367225 7773 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
VARSP26640 AL139811.1-201ENST00000424779 2299 ntBASIC5.31□□□□□ -1.56
VARSP26640 ZNF704-201ENST00000327835 14386 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
VARSP26640 DSPP-202ENST00000399271 4331 ntAPPRIS P1 TSL 5 BASIC5.31□□□□□ -1.56
VARSP26640 UGT2A1-205ENST00000512704 2519 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
VARSP26640 ARHGAP24-201ENST00000264343 4572 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
VARSP26640 C4BPAP1-201ENST00000415474 1893 ntBASIC5.31□□□□□ -1.56
VARSP26640 Y_RNA.136-201ENST00000363444 102 ntBASIC5.31□□□□□ -1.56
VARSP26640 RNU6-818P-201ENST00000364837 108 ntBASIC5.31□□□□□ -1.56
VARSP26640 RNU6-336P-201ENST00000364891 107 ntBASIC5.31□□□□□ -1.56
VARSP26640 GTSF1L-202ENST00000373005 459 ntAPPRIS ALT2 TSL 3 BASIC5.31□□□□□ -1.56
VARSP26640 SNORD56.6-201ENST00000384569 71 ntBASIC5.31□□□□□ -1.56
VARSP26640 Y_RNA.570-201ENST00000384750 101 ntBASIC5.31□□□□□ -1.56
VARSP26640 MIR32-201ENST00000384965 70 ntBASIC5.31□□□□□ -1.56
VARSP26640 DLGAP5-202ENST00000395425 2954 ntAPPRIS ALT2 TSL 1 (best) BASIC5.31□□□□□ -1.56
VARSP26640 AP000907.1-201ENST00000428428 510 ntBASIC5.31□□□□□ -1.56
VARSP26640 AL713851.2-201ENST00000431209 332 ntTSL 2 BASIC5.31□□□□□ -1.56
VARSP26640 AC011742.1-201ENST00000431448 434 ntBASIC5.31□□□□□ -1.56
VARSP26640 CYCSP6-201ENST00000434498 302 ntBASIC5.31□□□□□ -1.56
VARSP26640 TRAPPC2P9-201ENST00000434556 343 ntBASIC5.31□□□□□ -1.56
VARSP26640 AL772161.1-201ENST00000439130 476 ntBASIC5.31□□□□□ -1.56
VARSP26640 NUTF2P7-201ENST00000453086 375 ntBASIC5.31□□□□□ -1.56
VARSP26640 TPPP2-202ENST00000460647 568 ntTSL 3 BASIC5.31□□□□□ -1.56
VARSP26640 AC100832.1-201ENST00000471945 383 ntBASIC5.31□□□□□ -1.56
VARSP26640 AP000870.1-201ENST00000472927 406 ntBASIC5.31□□□□□ -1.56
VARSP26640 RPL26P26-201ENST00000480251 434 ntBASIC5.31□□□□□ -1.56
VARSP26640 RPS4XP22-201ENST00000480755 780 ntBASIC5.31□□□□□ -1.56
VARSP26640 LINC02046-202ENST00000481334 390 ntTSL 3 BASIC5.31□□□□□ -1.56
VARSP26640 AC010409.1-201ENST00000487382 476 ntBASIC5.31□□□□□ -1.56
VARSP26640 AC012616.1-201ENST00000600294 197 ntBASIC5.31□□□□□ -1.56
VARSP26640 AP000769.2-201ENST00000602344 396 ntBASIC5.31□□□□□ -1.56
VARSP26640 MIR8080-201ENST00000622224 89 ntBASIC5.31□□□□□ -1.56
VARSP26640 AC006001.4-201ENST00000622243 395 ntBASIC5.31□□□□□ -1.56
VARSP26640 SCARNA4-201ENST00000629045 128 ntBASIC5.31□□□□□ -1.56
VARSP26640 BCLAF1-201ENST00000353331 7110 ntTSL 5 BASIC5.31□□□□□ -1.56
VARSP26640 FOXP1-IT1-201ENST00000498714 3539 ntTSL 2 BASIC5.31□□□□□ -1.56
VARSP26640 GPALPP1-201ENST00000357537 5368 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
VARSP26640 AC004817.4-201ENST00000602396 3625 ntBASIC5.3□□□□□ -1.56
VARSP26640 ABCB5-202ENST00000404938 5811 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
VARSP26640 FILIP1L-209ENST00000487087 2321 ntTSL 5 BASIC5.3□□□□□ -1.56
VARSP26640 RAD17P1-201ENST00000418130 2042 ntBASIC5.3□□□□□ -1.56
VARSP26640 RNU6-151P-201ENST00000364158 107 ntBASIC5.3□□□□□ -1.56
VARSP26640 RNU6-20P-201ENST00000384106 107 ntBASIC5.3□□□□□ -1.56
VARSP26640 MIR551A-201ENST00000385042 96 ntBASIC5.3□□□□□ -1.56
VARSP26640 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
VARSP26640 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC5.3□□□□□ -1.56
VARSP26640 MTATP6P4-201ENST00000427725 675 ntBASIC5.3□□□□□ -1.56
VARSP26640 AL020998.1-201ENST00000444923 229 ntTSL 3 BASIC5.3□□□□□ -1.56
VARSP26640 RPL23AP3-201ENST00000453844 468 ntBASIC5.3□□□□□ -1.56
VARSP26640 RPS5P7-201ENST00000456664 608 ntBASIC5.3□□□□□ -1.56
VARSP26640 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC5.3□□□□□ -1.56
VARSP26640 LINC01753-201ENST00000458145 631 ntTSL 3 BASIC5.3□□□□□ -1.56
VARSP26640 RN7SL172P-201ENST00000460535 303 ntBASIC5.3□□□□□ -1.56
VARSP26640 RPL21P13-201ENST00000488305 481 ntBASIC5.3□□□□□ -1.56
VARSP26640 RN7SL346P-201ENST00000491561 294 ntBASIC5.3□□□□□ -1.56
VARSP26640 HMGB3P3-201ENST00000510526 400 ntBASIC5.3□□□□□ -1.56
VARSP26640 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC5.3□□□□□ -1.56
VARSP26640 THEMIS-204ENST00000537166 3830 ntAPPRIS ALT2 TSL 2 BASIC5.3□□□□□ -1.56
VARSP26640 HMGN2P6-201ENST00000551091 273 ntBASIC5.3□□□□□ -1.56
VARSP26640 AL359237.1-202ENST00000556168 487 ntTSL 5 BASIC5.3□□□□□ -1.56
VARSP26640 AC233702.2-202ENST00000562547 291 ntBASIC5.3□□□□□ -1.56
VARSP26640 MIR5692C2-201ENST00000577959 77 ntBASIC5.3□□□□□ -1.56
VARSP26640 FKBP1AP1-201ENST00000594588 318 ntBASIC5.3□□□□□ -1.56
VARSP26640 KLKP1-201ENST00000595979 403 ntBASIC5.3□□□□□ -1.56
VARSP26640 AC006994.2-202ENST00000639259 3828 ntTSL 5 BASIC5.3□□□□□ -1.56
VARSP26640 CACNB4-221ENST00000636130 7748 ntTSL 5 BASIC5.3□□□□□ -1.56
VARSP26640 ZNF571-201ENST00000328550 4113 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
VARSP26640 GABRG1-201ENST00000295452 6785 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
VARSP26640 LRRC37A-203ENST00000496930 3860 ntTSL 2 BASIC5.3□□□□□ -1.56
VARSP26640 RAD21-210ENST00000523986 2506 ntTSL 2 BASIC5.3□□□□□ -1.56
VARSP26640 RBBP6-203ENST00000381039 3384 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
VARSP26640 AC100757.1-201ENST00000616872 1835 ntBASIC5.3□□□□□ -1.56
VARSP26640 TEX9-207ENST00000560582 2005 ntTSL 3 BASIC5.3□□□□□ -1.56
VARSP26640 TCF4-281ENST00000636822 7640 ntTSL 5 BASIC5.29□□□□□ -1.56
VARSP26640 LINC00504-201ENST00000505089 4672 ntTSL 2 BASIC5.29□□□□□ -1.56
VARSP26640 RPAP3-202ENST00000380650 2149 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
VARSP26640 SDR42E1-201ENST00000328945 11566 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
VARSP26640 SCN2A-201ENST00000283256 8660 ntAPPRIS P5 TSL 1 (best) BASIC5.29□□□□□ -1.56
VARSP26640 PLEKHG7-203ENST00000638590 3267 ntAPPRIS P1 TSL 2 BASIC5.29□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 136.6 ms