Protein–RNA interactions for Protein: P23560

BDNF, Brain-derived neurotrophic factor, humanhuman

Predictions only

Length 247 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BDNFP23560 PSMA2P1-201ENST00000526365 646 ntBASIC3.27□□□□□ -1.89
BDNFP23560 AP000790.2-201ENST00000534388 522 ntTSL 3 BASIC3.27□□□□□ -1.89
BDNFP23560 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC3.27□□□□□ -1.89
BDNFP23560 AC069114.1-201ENST00000580927 287 ntTSL 2 BASIC3.27□□□□□ -1.89
BDNFP23560 GALNT1-205ENST00000591081 1120 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
BDNFP23560 HDX-201ENST00000297977 6200 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
BDNFP23560 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC3.27□□□□□ -1.89
BDNFP23560 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC3.27□□□□□ -1.89
BDNFP23560 NBEAL1-203ENST00000449802 10938 ntAPPRIS P1 TSL 5 BASIC3.27□□□□□ -1.89
BDNFP23560 AC093908.1-201ENST00000623125 8092 ntBASIC3.27□□□□□ -1.89
BDNFP23560 MARCH7-202ENST00000409175 2402 ntAPPRIS P1 TSL 2 BASIC3.27□□□□□ -1.89
BDNFP23560 CCDC82-201ENST00000278520 2941 ntAPPRIS P2 TSL 5 BASIC3.26□□□□□ -1.89
BDNFP23560 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
BDNFP23560 AC131280.1-202ENST00000624067 4211 ntBASIC3.26□□□□□ -1.89
BDNFP23560 HSPE1P11-201ENST00000339579 310 ntBASIC3.26□□□□□ -1.89
BDNFP23560 RNY4P16-201ENST00000364768 94 ntBASIC3.26□□□□□ -1.89
BDNFP23560 RNU5E-6P-201ENST00000365574 115 ntBASIC3.26□□□□□ -1.89
BDNFP23560 AC096664.2-201ENST00000411843 406 ntBASIC3.26□□□□□ -1.89
BDNFP23560 HMGN2P35-201ENST00000412164 270 ntBASIC3.26□□□□□ -1.89
BDNFP23560 RPS15AP12-201ENST00000419498 388 ntBASIC3.26□□□□□ -1.89
BDNFP23560 AL390067.1-201ENST00000440009 420 ntTSL 3 BASIC3.26□□□□□ -1.89
BDNFP23560 GYG2-AS1-201ENST00000445107 515 ntTSL 5 BASIC3.26□□□□□ -1.89
BDNFP23560 EEF1B2P7-201ENST00000451177 676 ntBASIC3.26□□□□□ -1.89
BDNFP23560 AC233279.1-201ENST00000455300 423 ntBASIC3.26□□□□□ -1.89
BDNFP23560 MTCO2P29-201ENST00000465212 189 ntBASIC3.26□□□□□ -1.89
BDNFP23560 MIR1302-2HG-201ENST00000469289 535 ntTSL 5 BASIC3.26□□□□□ -1.89
BDNFP23560 RN7SL283P-201ENST00000489055 303 ntBASIC3.26□□□□□ -1.89
BDNFP23560 EIF4EP3-201ENST00000498782 656 ntBASIC3.26□□□□□ -1.89
BDNFP23560 AP002075.1-201ENST00000505091 603 ntTSL 3 BASIC3.26□□□□□ -1.89
BDNFP23560 MTND1P22-201ENST00000510572 951 ntBASIC3.26□□□□□ -1.89
BDNFP23560 RNU1-143P-201ENST00000516296 146 ntBASIC3.26□□□□□ -1.89
BDNFP23560 AC025881.1-201ENST00000518851 512 ntBASIC3.26□□□□□ -1.89
BDNFP23560 AC022360.2-201ENST00000522390 456 ntTSL 3 BASIC3.26□□□□□ -1.89
BDNFP23560 AP002404.1-201ENST00000532005 451 ntBASIC3.26□□□□□ -1.89
BDNFP23560 MYL12A-202ENST00000536605 899 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
BDNFP23560 AL121821.2-201ENST00000556081 394 ntBASIC3.26□□□□□ -1.89
BDNFP23560 MYL12A-209ENST00000580887 899 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
BDNFP23560 AC015908.4-201ENST00000582334 575 ntTSL 4 BASIC3.26□□□□□ -1.89
BDNFP23560 AC093424.1-201ENST00000604999 338 ntBASIC3.26□□□□□ -1.89
BDNFP23560 AP000860.1-201ENST00000605250 559 ntBASIC3.26□□□□□ -1.89
BDNFP23560 RNU6-87P-201ENST00000607561 108 ntBASIC3.26□□□□□ -1.89
BDNFP23560 AC108747.1-201ENST00000609508 535 ntBASIC3.26□□□□□ -1.89
BDNFP23560 U1.23-201ENST00000610293 146 ntBASIC3.26□□□□□ -1.89
BDNFP23560 AL591516.1-201ENST00000611326 274 ntBASIC3.26□□□□□ -1.89
BDNFP23560 RNU1-68P-201ENST00000615382 146 ntBASIC3.26□□□□□ -1.89
BDNFP23560 U1.39-201ENST00000621562 146 ntBASIC3.26□□□□□ -1.89
BDNFP23560 AL512643.1-201ENST00000635735 524 ntBASIC3.26□□□□□ -1.89
BDNFP23560 PICALM-209ENST00000528398 2049 ntTSL 2 BASIC3.26□□□□□ -1.89
BDNFP23560 RRAS2-211ENST00000537760 2034 ntTSL 2 BASIC3.26□□□□□ -1.89
BDNFP23560 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
BDNFP23560 AC080128.1-201ENST00000474389 1917 ntBASIC3.25□□□□□ -1.89
BDNFP23560 THEMIS-201ENST00000368248 3866 ntAPPRIS P3 TSL 1 (best) BASIC3.25□□□□□ -1.89
BDNFP23560 VTRNA1-1-201ENST00000363120 99 ntBASIC3.25□□□□□ -1.89
BDNFP23560 RNU6-288P-201ENST00000363690 104 ntBASIC3.25□□□□□ -1.89
BDNFP23560 SNORA71.1-201ENST00000364523 117 ntBASIC3.25□□□□□ -1.89
BDNFP23560 RPL17P50-201ENST00000396131 546 ntBASIC3.25□□□□□ -1.89
BDNFP23560 MIR1302-8-201ENST00000408342 128 ntBASIC3.25□□□□□ -1.89
BDNFP23560 RNU6ATAC16P-201ENST00000408591 138 ntBASIC3.25□□□□□ -1.89
BDNFP23560 RNA5SP293-201ENST00000410527 113 ntBASIC3.25□□□□□ -1.89
BDNFP23560 RNU2-8P-201ENST00000410727 190 ntBASIC3.25□□□□□ -1.89
BDNFP23560 LINC01037-201ENST00000427337 424 ntTSL 5 BASIC3.25□□□□□ -1.89
BDNFP23560 MYCBP2-AS2-201ENST00000428716 428 ntTSL 5 BASIC3.25□□□□□ -1.89
BDNFP23560 AC004160.1-205ENST00000428967 577 ntTSL 4 BASIC3.25□□□□□ -1.89
BDNFP23560 SUMO1P4-201ENST00000429430 302 ntBASIC3.25□□□□□ -1.89
BDNFP23560 AL592045.1-201ENST00000429867 352 ntBASIC3.25□□□□□ -1.89
BDNFP23560 AL591704.1-201ENST00000432574 275 ntBASIC3.25□□□□□ -1.89
BDNFP23560 AL591212.2-201ENST00000433923 257 ntBASIC3.25□□□□□ -1.89
BDNFP23560 AC095032.1-201ENST00000444810 527 ntTSL 3 BASIC3.25□□□□□ -1.89
BDNFP23560 AC068587.2-201ENST00000478386 781 ntBASIC3.25□□□□□ -1.89
BDNFP23560 AC010273.2-201ENST00000479830 438 ntTSL 5 BASIC3.25□□□□□ -1.89
BDNFP23560 RPL22P13-201ENST00000493291 347 ntBASIC3.25□□□□□ -1.89
BDNFP23560 AC082650.1-201ENST00000503542 575 ntTSL 4 BASIC3.25□□□□□ -1.89
BDNFP23560 AC099499.1-201ENST00000505040 558 ntTSL 3 BASIC3.25□□□□□ -1.89
BDNFP23560 CSN1S1-204ENST00000507772 895 ntAPPRIS ALT2 TSL 5 BASIC3.25□□□□□ -1.89
BDNFP23560 AC023141.11-201ENST00000508864 202 ntBASIC3.25□□□□□ -1.89
BDNFP23560 RN7SKP287-201ENST00000516546 266 ntBASIC3.25□□□□□ -1.89
BDNFP23560 BTF3P12-201ENST00000519620 469 ntBASIC3.25□□□□□ -1.89
BDNFP23560 AC103952.1-201ENST00000521872 590 ntTSL 3 BASIC3.25□□□□□ -1.89
BDNFP23560 AHI1-212ENST00000528103 441 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
BDNFP23560 AC022240.1-201ENST00000532065 684 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
BDNFP23560 AC022080.3-201ENST00000544433 482 ntBASIC3.25□□□□□ -1.89
BDNFP23560 AC130415.1-201ENST00000547569 1010 ntTSL 4 BASIC3.25□□□□□ -1.89
BDNFP23560 APAF1-207ENST00000547743 651 ntTSL 3 BASIC3.25□□□□□ -1.89
BDNFP23560 ZNF519P3-201ENST00000557158 1032 ntBASIC3.25□□□□□ -1.89
BDNFP23560 AC138761.3-201ENST00000579993 334 ntBASIC3.25□□□□□ -1.89
BDNFP23560 ZRANB2-AS2-213ENST00000591654 719 ntTSL 5 BASIC3.25□□□□□ -1.89
BDNFP23560 AC099566.1-211ENST00000595188 737 ntTSL 5 BASIC3.25□□□□□ -1.89
BDNFP23560 AC004223.4-201ENST00000612426 332 ntBASIC3.25□□□□□ -1.89
BDNFP23560 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC3.25□□□□□ -1.89
BDNFP23560 CBLL1-201ENST00000222597 2003 ntAPPRIS ALT1 TSL 1 (best) BASIC3.25□□□□□ -1.89
BDNFP23560 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
BDNFP23560 C1orf141-203ENST00000371007 2153 ntAPPRIS P3 TSL 5 BASIC3.24□□□□□ -1.89
BDNFP23560 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC3.24□□□□□ -1.89
BDNFP23560 KIAA0825-203ENST00000513200 4942 ntTSL 5 BASIC3.24□□□□□ -1.89
BDNFP23560 AC073343.1-201ENST00000328239 651 ntBASIC3.24□□□□□ -1.89
BDNFP23560 MIR22-201ENST00000362190 85 ntBASIC3.24□□□□□ -1.89
BDNFP23560 RNU5F-6P-201ENST00000362979 116 ntBASIC3.24□□□□□ -1.89
BDNFP23560 SNORD56.3-201ENST00000363507 71 ntBASIC3.24□□□□□ -1.89
BDNFP23560 RNU6-190P-201ENST00000384154 102 ntBASIC3.24□□□□□ -1.89
BDNFP23560 RNU6-14P-201ENST00000384630 106 ntBASIC3.24□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 95.8 ms