Protein–RNA interactions for Protein: P18827

SDC1, Syndecan-1, humanhuman

Predictions only

Length 310 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDC1P18827 RPL23AP20-201ENST00000447965 421 ntBASIC2.51□□□□□ -2.01
SDC1P18827 USP9YP12-201ENST00000450481 570 ntBASIC2.51□□□□□ -2.01
SDC1P18827 AC098826.2-201ENST00000452011 651 ntBASIC2.51□□□□□ -2.01
SDC1P18827 SSXP1-201ENST00000453640 473 ntBASIC2.51□□□□□ -2.01
SDC1P18827 RPL12P25-201ENST00000455592 494 ntBASIC2.51□□□□□ -2.01
SDC1P18827 ANKRD62P1-PARP4P3-201ENST00000456726 1181 ntTSL 5 BASIC2.51□□□□□ -2.01
SDC1P18827 AL139260.1-202ENST00000456813 441 ntTSL 3 BASIC2.51□□□□□ -2.01
SDC1P18827 AC008571.1-201ENST00000467232 300 ntBASIC2.51□□□□□ -2.01
SDC1P18827 MTND3P7-201ENST00000474435 343 ntBASIC2.51□□□□□ -2.01
SDC1P18827 AC080014.1-201ENST00000496877 1201 ntBASIC2.51□□□□□ -2.01
SDC1P18827 AC138853.1-201ENST00000503549 823 ntBASIC2.51□□□□□ -2.01
SDC1P18827 AC026427.2-201ENST00000506228 536 ntBASIC2.51□□□□□ -2.01
SDC1P18827 RNA5SP471-201ENST00000516971 106 ntBASIC2.51□□□□□ -2.01
SDC1P18827 AC120042.2-201ENST00000521556 667 ntTSL 2 BASIC2.51□□□□□ -2.01
SDC1P18827 AP003181.2-201ENST00000528941 181 ntBASIC2.51□□□□□ -2.01
SDC1P18827 AP003122.4-201ENST00000530980 758 ntBASIC2.51□□□□□ -2.01
SDC1P18827 AL359237.1-201ENST00000554305 826 ntTSL 5 BASIC2.51□□□□□ -2.01
SDC1P18827 ABBA01006766.1-201ENST00000584728 294 ntBASIC2.51□□□□□ -2.01
SDC1P18827 AC112191.3-201ENST00000604371 277 ntBASIC2.51□□□□□ -2.01
SDC1P18827 ZRANB2-AS2-218ENST00000608360 722 ntTSL 5 BASIC2.51□□□□□ -2.01
SDC1P18827 AC012360.2-201ENST00000609349 391 ntBASIC2.51□□□□□ -2.01
SDC1P18827 AC103710.2-201ENST00000609912 942 ntBASIC2.51□□□□□ -2.01
SDC1P18827 AC008147.4-201ENST00000617570 1204 ntBASIC2.51□□□□□ -2.01
SDC1P18827 AC006338.1-201ENST00000618453 749 ntBASIC2.51□□□□□ -2.01
SDC1P18827 AC099654.13-201ENST00000639774 207 ntBASIC2.51□□□□□ -2.01
SDC1P18827 MLF1-203ENST00000392822 2157 ntTSL 5 BASIC2.51□□□□□ -2.01
SDC1P18827 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC2.51□□□□□ -2.01
SDC1P18827 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC2.51□□□□□ -2.01
SDC1P18827 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
SDC1P18827 MTND4P4-201ENST00000439033 1366 ntBASIC2.5□□□□□ -2.01
SDC1P18827 PMS1-215ENST00000447232 2576 ntTSL 2 BASIC2.5□□□□□ -2.01
SDC1P18827 RNU1-100P-201ENST00000365255 165 ntBASIC2.5□□□□□ -2.01
SDC1P18827 C6orf62-201ENST00000378102 741 ntTSL 5 BASIC2.5□□□□□ -2.01
SDC1P18827 MT-TH-201ENST00000387441 69 ntBASIC2.5□□□□□ -2.01
SDC1P18827 AL139095.1-201ENST00000404326 391 ntBASIC2.5□□□□□ -2.01
SDC1P18827 MIR1289-1-201ENST00000408836 144 ntBASIC2.5□□□□□ -2.01
SDC1P18827 RNU2-36P-201ENST00000410361 191 ntBASIC2.5□□□□□ -2.01
SDC1P18827 NPM1P11-201ENST00000417106 855 ntBASIC2.5□□□□□ -2.01
SDC1P18827 LINC01402-201ENST00000422226 279 ntTSL 3 BASIC2.5□□□□□ -2.01
SDC1P18827 CYCSP46-201ENST00000423569 204 ntBASIC2.5□□□□□ -2.01
SDC1P18827 AC019097.1-201ENST00000424783 735 ntBASIC2.5□□□□□ -2.01
SDC1P18827 AC129850.1-201ENST00000436203 508 ntBASIC2.5□□□□□ -2.01
SDC1P18827 RPL23AP58-201ENST00000440453 469 ntBASIC2.5□□□□□ -2.01
SDC1P18827 AC093639.1-201ENST00000441026 473 ntTSL 2 BASIC2.5□□□□□ -2.01
SDC1P18827 AC011816.1-201ENST00000441346 546 ntBASIC2.5□□□□□ -2.01
SDC1P18827 LINC01683-201ENST00000443479 412 ntTSL 3 BASIC2.5□□□□□ -2.01
SDC1P18827 IGKV1OR-3-201ENST00000446944 348 ntBASIC2.5□□□□□ -2.01
SDC1P18827 DPP10-AS2-201ENST00000446992 624 ntTSL 5 BASIC2.5□□□□□ -2.01
SDC1P18827 AC013727.2-201ENST00000447761 545 ntTSL 4 BASIC2.5□□□□□ -2.01
SDC1P18827 MTND1P12-201ENST00000455231 147 ntBASIC2.5□□□□□ -2.01
SDC1P18827 AC005538.1-201ENST00000455991 594 ntTSL 3 BASIC2.5□□□□□ -2.01
SDC1P18827 SCEL-AS1-201ENST00000456280 493 ntTSL 3 BASIC2.5□□□□□ -2.01
SDC1P18827 AC013267.1-201ENST00000458227 267 ntBASIC2.5□□□□□ -2.01
SDC1P18827 RBM43P1-201ENST00000476891 1081 ntBASIC2.5□□□□□ -2.01
SDC1P18827 AC011825.1-201ENST00000484967 388 ntBASIC2.5□□□□□ -2.01
SDC1P18827 AL160314.1-201ENST00000490836 438 ntBASIC2.5□□□□□ -2.01
SDC1P18827 FABP5P5-201ENST00000515537 406 ntBASIC2.5□□□□□ -2.01
SDC1P18827 SNORA31.3-201ENST00000516029 96 ntBASIC2.5□□□□□ -2.01
SDC1P18827 SNORA31.21-201ENST00000517180 77 ntBASIC2.5□□□□□ -2.01
SDC1P18827 AC060788.1-201ENST00000521318 469 ntBASIC2.5□□□□□ -2.01
SDC1P18827 AC087373.1-201ENST00000524920 491 ntBASIC2.5□□□□□ -2.01
SDC1P18827 AP006587.4-201ENST00000526053 529 ntBASIC2.5□□□□□ -2.01
SDC1P18827 MS4A4E-204ENST00000526086 460 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
SDC1P18827 ATP5F1P5-201ENST00000526403 760 ntBASIC2.5□□□□□ -2.01
SDC1P18827 AP001189.6-201ENST00000528781 831 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
SDC1P18827 EMP1-206ENST00000537612 505 ntTSL 3 BASIC2.5□□□□□ -2.01
SDC1P18827 AC008083.1-201ENST00000547748 663 ntTSL 2 BASIC2.5□□□□□ -2.01
SDC1P18827 AC026462.2-201ENST00000565771 286 ntTSL 2 BASIC2.5□□□□□ -2.01
SDC1P18827 AC106796.1-201ENST00000577173 615 ntTSL 3 BASIC2.5□□□□□ -2.01
SDC1P18827 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC2.5□□□□□ -2.01
SDC1P18827 AC007619.2-201ENST00000605743 379 ntBASIC2.5□□□□□ -2.01
SDC1P18827 MALAT1-206ENST00000612781 234 ntTSL 3 BASIC2.5□□□□□ -2.01
SDC1P18827 C4orf22-209ENST00000621014 228 ntTSL 3 BASIC2.5□□□□□ -2.01
SDC1P18827 AC009878.1-201ENST00000621819 340 ntBASIC2.5□□□□□ -2.01
SDC1P18827 AC091931.1-201ENST00000623488 728 ntBASIC2.5□□□□□ -2.01
SDC1P18827 MAPK10-266ENST00000641066 6555 ntBASIC2.5□□□□□ -2.01
SDC1P18827 OR4M1-202ENST00000641200 3493 ntAPPRIS P1 BASIC2.5□□□□□ -2.01
SDC1P18827 IL33-201ENST00000381434 2641 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
SDC1P18827 FAM214A-201ENST00000261844 4217 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
SDC1P18827 SLC25A46-206ENST00000509432 1596 ntTSL 2 BASIC2.49□□□□□ -2.01
SDC1P18827 PIK3C2G-202ENST00000433979 4840 ntAPPRIS P1 TSL 5 BASIC2.49□□□□□ -2.01
SDC1P18827 HSPA4L-202ENST00000505726 2639 ntTSL 2 BASIC2.49□□□□□ -2.01
SDC1P18827 AASDH-207ENST00000513376 3241 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
SDC1P18827 RNU4-1-201ENST00000363925 141 ntBASIC2.49□□□□□ -2.01
SDC1P18827 RNU6-701P-201ENST00000384059 107 ntBASIC2.49□□□□□ -2.01
SDC1P18827 MIR9-1-201ENST00000385198 89 ntBASIC2.49□□□□□ -2.01
SDC1P18827 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC2.49□□□□□ -2.01
SDC1P18827 SNORA26.8-201ENST00000391306 124 ntBASIC2.49□□□□□ -2.01
SDC1P18827 CD3D-202ENST00000392884 476 ntTSL 2 BASIC2.49□□□□□ -2.01
SDC1P18827 FCF1P10-201ENST00000407590 479 ntBASIC2.49□□□□□ -2.01
SDC1P18827 RNU2-62P-201ENST00000410868 191 ntBASIC2.49□□□□□ -2.01
SDC1P18827 ZNF90P2-204ENST00000419323 1075 ntBASIC2.49□□□□□ -2.01
SDC1P18827 RPS15AP12-201ENST00000419498 388 ntBASIC2.49□□□□□ -2.01
SDC1P18827 MTATP6P17-201ENST00000431030 672 ntBASIC2.49□□□□□ -2.01
SDC1P18827 AC004691.1-201ENST00000440376 547 ntTSL 3 BASIC2.49□□□□□ -2.01
SDC1P18827 TAF9P1-201ENST00000445421 515 ntBASIC2.49□□□□□ -2.01
SDC1P18827 TAF9P2-201ENST00000454958 515 ntBASIC2.49□□□□□ -2.01
SDC1P18827 IFT74-AS1-201ENST00000456198 405 ntTSL 2 BASIC2.49□□□□□ -2.01
SDC1P18827 AC087588.1-201ENST00000462203 316 ntBASIC2.49□□□□□ -2.01
SDC1P18827 C1orf112-206ENST00000472795 925 ntAPPRIS ALT2 TSL 2 BASIC2.49□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 92 ms