Protein–RNA interactions for Protein: P17812

CTPS1, CTP synthase 1, humanhuman

Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTPS1P17812 MIR454-201ENST00000390180 115 ntBASIC3.38□□□□□ -1.87
CTPS1P17812 DEFB116-201ENST00000400549 309 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
CTPS1P17812 MIR1277-201ENST00000408536 78 ntBASIC3.38□□□□□ -1.87
CTPS1P17812 MTND1P23-201ENST00000416931 372 ntBASIC3.38□□□□□ -1.87
CTPS1P17812 USP9YP27-201ENST00000418455 438 ntBASIC3.38□□□□□ -1.87
CTPS1P17812 AC106873.1-201ENST00000420664 459 ntTSL 3 BASIC3.38□□□□□ -1.87
CTPS1P17812 LINC00368-201ENST00000422994 650 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
CTPS1P17812 MTCO1P20-201ENST00000425366 358 ntBASIC3.38□□□□□ -1.87
CTPS1P17812 AC000111.3-201ENST00000433478 193 ntBASIC3.38□□□□□ -1.87
CTPS1P17812 AL606489.2-201ENST00000433886 234 ntBASIC3.38□□□□□ -1.87
CTPS1P17812 AL596276.1-201ENST00000434465 418 ntBASIC3.38□□□□□ -1.87
CTPS1P17812 AL845311.1-201ENST00000444791 891 ntTSL 3 BASIC3.38□□□□□ -1.87
CTPS1P17812 DDX3P2-201ENST00000446138 111 ntBASIC3.38□□□□□ -1.87
CTPS1P17812 AC008264.1-201ENST00000447612 367 ntBASIC3.38□□□□□ -1.87
CTPS1P17812 AC004888.1-201ENST00000450480 547 ntTSL 2 BASIC3.38□□□□□ -1.87
CTPS1P17812 AC013269.3-201ENST00000450486 444 ntTSL 3 BASIC3.38□□□□□ -1.87
CTPS1P17812 AP000431.2-201ENST00000450653 790 ntTSL 2 BASIC3.38□□□□□ -1.87
CTPS1P17812 MRPS31P2-201ENST00000451581 518 ntBASIC3.38□□□□□ -1.87
CTPS1P17812 AL356010.1-201ENST00000456364 102 ntBASIC3.38□□□□□ -1.87
CTPS1P17812 AL160162.1-201ENST00000456715 442 ntTSL 3 BASIC3.38□□□□□ -1.87
CTPS1P17812 RNU6-420P-201ENST00000458780 107 ntBASIC3.38□□□□□ -1.87
CTPS1P17812 RPS20P20-201ENST00000460498 340 ntBASIC3.38□□□□□ -1.87
CTPS1P17812 MRPS17P3-201ENST00000465453 385 ntBASIC3.38□□□□□ -1.87
CTPS1P17812 MTCO3P38-201ENST00000468910 766 ntBASIC3.38□□□□□ -1.87
CTPS1P17812 MCCC1-AS1-201ENST00000471731 765 ntTSL 5 BASIC3.38□□□□□ -1.87
CTPS1P17812 AC083798.1-201ENST00000472671 131 ntBASIC3.38□□□□□ -1.87
CTPS1P17812 AC092989.1-201ENST00000481235 277 ntBASIC3.38□□□□□ -1.87
CTPS1P17812 AC079943.1-201ENST00000491909 466 ntTSL 3 BASIC3.38□□□□□ -1.87
CTPS1P17812 AC016550.2-202ENST00000511940 581 ntTSL 2 BASIC3.38□□□□□ -1.87
CTPS1P17812 RNU6-1281P-201ENST00000516223 105 ntBASIC3.38□□□□□ -1.87
CTPS1P17812 RN7SKP258-201ENST00000517151 304 ntBASIC3.38□□□□□ -1.87
CTPS1P17812 AC107934.2-201ENST00000518653 310 ntBASIC3.38□□□□□ -1.87
CTPS1P17812 AC022690.1-201ENST00000526681 550 ntBASIC3.38□□□□□ -1.87
CTPS1P17812 OR5BN1P-201ENST00000532955 829 ntBASIC3.38□□□□□ -1.87
CTPS1P17812 LINC01495-202ENST00000534135 343 ntTSL 2 BASIC3.38□□□□□ -1.87
CTPS1P17812 AHI1-217ENST00000534469 680 ntTSL 3 BASIC3.38□□□□□ -1.87
CTPS1P17812 AC025575.1-201ENST00000548497 544 ntTSL 4 BASIC3.38□□□□□ -1.87
CTPS1P17812 AL133241.1-201ENST00000556832 487 ntBASIC3.38□□□□□ -1.87
CTPS1P17812 C16orf97-203ENST00000566314 281 ntTSL 3 BASIC3.38□□□□□ -1.87
CTPS1P17812 MIR4276-201ENST00000584832 70 ntBASIC3.38□□□□□ -1.87
CTPS1P17812 DPPA3P3-201ENST00000603842 430 ntBASIC3.38□□□□□ -1.87
CTPS1P17812 AC244093.3-201ENST00000615419 411 ntTSL 3 BASIC3.38□□□□□ -1.87
CTPS1P17812 SMAD5-AS1_2.1-201ENST00000617906 131 ntBASIC3.38□□□□□ -1.87
CTPS1P17812 PLCE1P1-201ENST00000622094 305 ntBASIC3.38□□□□□ -1.87
CTPS1P17812 AC068631.1-221ENST00000626006 592 ntTSL 5 BASIC3.38□□□□□ -1.87
CTPS1P17812 U6.98-201ENST00000637157 84 ntBASIC3.38□□□□□ -1.87
CTPS1P17812 MIR1321-201ENST00000637766 79 ntBASIC3.38□□□□□ -1.87
CTPS1P17812 SENP7-204ENST00000394085 1483 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
CTPS1P17812 ABCA5-208ENST00000588877 6525 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
CTPS1P17812 ABCC9-202ENST00000261201 4650 ntAPPRIS ALT1 TSL 5 BASIC3.38□□□□□ -1.87
CTPS1P17812 PHTF2-201ENST00000248550 4778 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
CTPS1P17812 CCSER2-201ENST00000224756 7664 ntAPPRIS P1 TSL 5 BASIC3.37□□□□□ -1.87
CTPS1P17812 AL137003.2-201ENST00000606924 2538 ntBASIC3.37□□□□□ -1.87
CTPS1P17812 AC007256.1-201ENST00000392253 2765 ntBASIC3.37□□□□□ -1.87
CTPS1P17812 C5orf51-201ENST00000381647 5241 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
CTPS1P17812 PP2D1-202ENST00000389050 2151 ntAPPRIS P1 TSL 5 BASIC3.37□□□□□ -1.87
CTPS1P17812 MIR30E-201ENST00000362104 92 ntBASIC3.37□□□□□ -1.87
CTPS1P17812 RNU6-179P-201ENST00000363350 107 ntBASIC3.37□□□□□ -1.87
CTPS1P17812 Y_RNA.453-201ENST00000384223 109 ntBASIC3.37□□□□□ -1.87
CTPS1P17812 RNVU1-14-201ENST00000384770 164 ntBASIC3.37□□□□□ -1.87
CTPS1P17812 RNU6-1158P-201ENST00000391167 107 ntBASIC3.37□□□□□ -1.87
CTPS1P17812 MDM2-208ENST00000393410 732 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
CTPS1P17812 MIR1290-201ENST00000408735 78 ntBASIC3.37□□□□□ -1.87
CTPS1P17812 RNU6-55P-201ENST00000411092 107 ntBASIC3.37□□□□□ -1.87
CTPS1P17812 RN7SKP140-201ENST00000411196 284 ntBASIC3.37□□□□□ -1.87
CTPS1P17812 RNU6-954P-201ENST00000411355 107 ntBASIC3.37□□□□□ -1.87
CTPS1P17812 LINC00301-202ENST00000412599 772 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
CTPS1P17812 OR51A5P-201ENST00000415429 942 ntBASIC3.37□□□□□ -1.87
CTPS1P17812 AL356968.1-201ENST00000416622 474 ntBASIC3.37□□□□□ -1.87
CTPS1P17812 ZNF90P2-204ENST00000419323 1075 ntBASIC3.37□□□□□ -1.87
CTPS1P17812 AL451054.2-201ENST00000420896 202 ntBASIC3.37□□□□□ -1.87
CTPS1P17812 RPL31P12-201ENST00000422587 358 ntBASIC3.37□□□□□ -1.87
CTPS1P17812 ATP6V0E1P4-201ENST00000427294 242 ntBASIC3.37□□□□□ -1.87
CTPS1P17812 AL589986.2-201ENST00000429352 397 ntTSL 2 BASIC3.37□□□□□ -1.87
CTPS1P17812 SETP5-201ENST00000437270 562 ntBASIC3.37□□□□□ -1.87
CTPS1P17812 AC018816.1-203ENST00000441894 338 ntTSL 3 BASIC3.37□□□□□ -1.87
CTPS1P17812 AC092162.2-204ENST00000451851 566 ntTSL 4 BASIC3.37□□□□□ -1.87
CTPS1P17812 RPL23AP67-201ENST00000465341 474 ntBASIC3.37□□□□□ -1.87
CTPS1P17812 AC006512.1-201ENST00000468816 291 ntBASIC3.37□□□□□ -1.87
CTPS1P17812 RPL31P60-201ENST00000478450 367 ntBASIC3.37□□□□□ -1.87
CTPS1P17812 AC012181.1-201ENST00000479895 423 ntBASIC3.37□□□□□ -1.87
CTPS1P17812 RPL36AP51-201ENST00000487216 318 ntBASIC3.37□□□□□ -1.87
CTPS1P17812 AC131956.2-201ENST00000510922 512 ntTSL 3 BASIC3.37□□□□□ -1.87
CTPS1P17812 AC074250.1-201ENST00000511117 192 ntBASIC3.37□□□□□ -1.87
CTPS1P17812 APOOP4-201ENST00000513530 597 ntBASIC3.37□□□□□ -1.87
CTPS1P17812 SNORA40.12-201ENST00000516329 111 ntBASIC3.37□□□□□ -1.87
CTPS1P17812 RNU6-1178P-201ENST00000516674 107 ntBASIC3.37□□□□□ -1.87
CTPS1P17812 MIR2276-201ENST00000516886 89 ntBASIC3.37□□□□□ -1.87
CTPS1P17812 NRON-201ENST00000517270 370 ntBASIC3.37□□□□□ -1.87
CTPS1P17812 AC011257.1-201ENST00000519048 281 ntTSL 3 BASIC3.37□□□□□ -1.87
CTPS1P17812 AP006587.4-201ENST00000526053 529 ntBASIC3.37□□□□□ -1.87
CTPS1P17812 DEUP1-203ENST00000527307 767 ntTSL 3 BASIC3.37□□□□□ -1.87
CTPS1P17812 AL352955.1-201ENST00000555490 332 ntTSL 3 BASIC3.37□□□□□ -1.87
CTPS1P17812 AC034105.3-201ENST00000565294 442 ntBASIC3.37□□□□□ -1.87
CTPS1P17812 AC113137.1-201ENST00000591869 558 ntTSL 4 BASIC3.37□□□□□ -1.87
CTPS1P17812 IGKV1OR2-6-201ENST00000603485 277 ntBASIC3.37□□□□□ -1.87
CTPS1P17812 RASSF8-215ENST00000611440 852 ntTSL 5 BASIC3.37□□□□□ -1.87
CTPS1P17812 AC109471.3-201ENST00000625219 233 ntTSL 5 BASIC3.37□□□□□ -1.87
CTPS1P17812 TTN-AS1-263ENST00000627527 784 ntTSL 5 BASIC3.37□□□□□ -1.87
CTPS1P17812 SYTL2-203ENST00000359152 4123 ntAPPRIS ALT1 TSL 1 (best) BASIC3.37□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 94.2 ms