Protein–RNA interactions for Protein: P13378

HOXD8, Homeobox protein Hox-D8, humanhuman

Predicted RBP Predictions only

Length 290 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD8P13378 AC009779.6-201ENST00000603972 165 ntBASIC4.98□□□□□ -1.61
HOXD8P13378 LINC00993-204ENST00000606476 500 ntTSL 5 BASIC4.98□□□□□ -1.61
HOXD8P13378 MIR492-201ENST00000638676 116 ntBASIC4.98□□□□□ -1.61
HOXD8P13378 ZC3H12B-201ENST00000338957 7256 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
HOXD8P13378 ELOVL7-203ENST00000505959 4165 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
HOXD8P13378 SMAD5-212ENST00000545620 6937 ntAPPRIS P1 TSL 5 BASIC4.98□□□□□ -1.61
HOXD8P13378 AC107027.3-201ENST00000565095 3473 ntBASIC4.98□□□□□ -1.61
HOXD8P13378 GBE1-205ENST00000489715 2513 ntAPPRIS ALT2 TSL 2 BASIC4.97□□□□□ -1.61
HOXD8P13378 ZNF382-204ENST00000439428 2742 ntAPPRIS ALT2 TSL 1 (best) BASIC4.97□□□□□ -1.61
HOXD8P13378 GABRG2-210ENST00000638772 7669 ntTSL 5 BASIC4.97□□□□□ -1.61
HOXD8P13378 OR8H2-203ENST00000641311 3092 ntAPPRIS P2 BASIC4.97□□□□□ -1.61
HOXD8P13378 FSBP-203ENST00000611249 2181 ntAPPRIS P1 TSL 5 BASIC4.97□□□□□ -1.61
HOXD8P13378 Z75746.1-201ENST00000440243 2080 ntBASIC4.97□□□□□ -1.61
HOXD8P13378 AL391987.6-201ENST00000305671 199 ntBASIC4.97□□□□□ -1.61
HOXD8P13378 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC4.97□□□□□ -1.61
HOXD8P13378 Y_RNA.297-201ENST00000364950 91 ntBASIC4.97□□□□□ -1.61
HOXD8P13378 U8.8-201ENST00000365399 135 ntBASIC4.97□□□□□ -1.61
HOXD8P13378 RNU6-76P-201ENST00000384060 104 ntBASIC4.97□□□□□ -1.61
HOXD8P13378 Y_RNA.518-201ENST00000384552 113 ntBASIC4.97□□□□□ -1.61
HOXD8P13378 AL353621.1-201ENST00000418219 243 ntBASIC4.97□□□□□ -1.61
HOXD8P13378 LINC01341-201ENST00000419361 552 ntTSL 2 BASIC4.97□□□□□ -1.61
HOXD8P13378 LINC01492-202ENST00000425157 659 ntTSL 5 BASIC4.97□□□□□ -1.61
HOXD8P13378 RPS12P10-201ENST00000427031 377 ntBASIC4.97□□□□□ -1.61
HOXD8P13378 RPL23AP25-201ENST00000430973 463 ntBASIC4.97□□□□□ -1.61
HOXD8P13378 CKS1BP5-201ENST00000434172 273 ntBASIC4.97□□□□□ -1.61
HOXD8P13378 AC092573.2-201ENST00000434546 243 ntBASIC4.97□□□□□ -1.61
HOXD8P13378 AC104332.1-201ENST00000440471 797 ntBASIC4.97□□□□□ -1.61
HOXD8P13378 AC012671.1-201ENST00000451912 203 ntBASIC4.97□□□□□ -1.61
HOXD8P13378 FPGT-203ENST00000467578 601 ntTSL 2 BASIC4.97□□□□□ -1.61
HOXD8P13378 AC034236.1-201ENST00000469891 373 ntBASIC4.97□□□□□ -1.61
HOXD8P13378 LINC02149-201ENST00000511443 558 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
HOXD8P13378 RNU6-911P-201ENST00000516523 104 ntBASIC4.97□□□□□ -1.61
HOXD8P13378 AC109329.1-201ENST00000518744 317 ntBASIC4.97□□□□□ -1.61
HOXD8P13378 MRPL49P2-201ENST00000521066 465 ntBASIC4.97□□□□□ -1.61
HOXD8P13378 AL359237.1-202ENST00000556168 487 ntTSL 5 BASIC4.97□□□□□ -1.61
HOXD8P13378 AC130289.1-201ENST00000577321 73 ntBASIC4.97□□□□□ -1.61
HOXD8P13378 AC011933.3-201ENST00000578226 372 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
HOXD8P13378 MIR3936-201ENST00000584304 110 ntBASIC4.97□□□□□ -1.61
HOXD8P13378 AC123912.5-201ENST00000605470 343 ntBASIC4.97□□□□□ -1.61
HOXD8P13378 AC004852.3-201ENST00000614131 326 ntBASIC4.97□□□□□ -1.61
HOXD8P13378 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC4.97□□□□□ -1.61
HOXD8P13378 TEX41-280ENST00000629185 591 ntTSL 5 BASIC4.97□□□□□ -1.61
HOXD8P13378 INPP4B-201ENST00000262992 3741 ntAPPRIS P1 TSL 5 BASIC4.97□□□□□ -1.61
HOXD8P13378 SSR1-202ENST00000397511 3248 ntTSL 5 BASIC4.97□□□□□ -1.61
HOXD8P13378 DDHD2-202ENST00000517385 4113 ntTSL 2 BASIC4.97□□□□□ -1.61
HOXD8P13378 TCP11X1-203ENST00000623912 1715 ntTSL 5 BASIC4.97□□□□□ -1.61
HOXD8P13378 ELAVL4-203ENST00000371821 3349 ntTSL 5 BASIC4.97□□□□□ -1.61
HOXD8P13378 CYP3A7-201ENST00000336374 1971 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.61
HOXD8P13378 RNMT-209ENST00000592764 4108 ntTSL 2 BASIC4.96□□□□□ -1.61
HOXD8P13378 ABCA8-215ENST00000615593 3264 ntTSL 5 BASIC4.96□□□□□ -1.61
HOXD8P13378 CNKSR2-202ENST00000379510 5315 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.61
HOXD8P13378 IQCH-202ENST00000358767 3062 ntTSL 5 BASIC4.96□□□□□ -1.61
HOXD8P13378 LRRC63-203ENST00000595396 2327 ntAPPRIS P2 TSL 5 BASIC4.96□□□□□ -1.61
HOXD8P13378 UBE3A-203ENST00000428984 2986 ntAPPRIS P3 TSL 5 BASIC4.96□□□□□ -1.61
HOXD8P13378 CLSPN-203ENST00000373220 3977 ntAPPRIS ALT2 TSL 1 (best) BASIC4.96□□□□□ -1.62
HOXD8P13378 UBE2L2-201ENST00000254302 429 ntBASIC4.96□□□□□ -1.62
HOXD8P13378 Y_RNA.105-201ENST00000363182 111 ntBASIC4.96□□□□□ -1.62
HOXD8P13378 RNU6-774P-201ENST00000363238 107 ntBASIC4.96□□□□□ -1.62
HOXD8P13378 Y_RNA.237-201ENST00000364439 102 ntBASIC4.96□□□□□ -1.62
HOXD8P13378 RNU6-882P-201ENST00000391025 103 ntBASIC4.96□□□□□ -1.62
HOXD8P13378 RNU6-837P-201ENST00000391056 108 ntBASIC4.96□□□□□ -1.62
HOXD8P13378 Y_RNA.592-201ENST00000410274 109 ntBASIC4.96□□□□□ -1.62
HOXD8P13378 RNU6-1203P-201ENST00000410703 110 ntBASIC4.96□□□□□ -1.62
HOXD8P13378 TOMM20P4-201ENST00000427861 435 ntBASIC4.96□□□□□ -1.62
HOXD8P13378 AP000844.1-201ENST00000446631 577 ntTSL 3 BASIC4.96□□□□□ -1.62
HOXD8P13378 AC073587.1-201ENST00000447093 876 ntBASIC4.96□□□□□ -1.62
HOXD8P13378 AP001439.1-201ENST00000455275 392 ntTSL 2 BASIC4.96□□□□□ -1.62
HOXD8P13378 RN7SL691P-201ENST00000494487 301 ntBASIC4.96□□□□□ -1.62
HOXD8P13378 LINC02494-201ENST00000509824 427 ntTSL 3 BASIC4.96□□□□□ -1.62
HOXD8P13378 AC008957.1-201ENST00000510740 478 ntTSL 3 BASIC4.96□□□□□ -1.62
HOXD8P13378 MIR892C-201ENST00000516410 77 ntBASIC4.96□□□□□ -1.62
HOXD8P13378 IGKV2-23-201ENST00000518729 323 ntBASIC4.96□□□□□ -1.62
HOXD8P13378 AC015911.9-201ENST00000591634 185 ntTSL 5 BASIC4.96□□□□□ -1.62
HOXD8P13378 AL590235.2-201ENST00000602641 632 ntTSL 5 BASIC4.96□□□□□ -1.62
HOXD8P13378 AC009314.1-201ENST00000603871 304 ntBASIC4.96□□□□□ -1.62
HOXD8P13378 AC010900.2-201ENST00000604508 210 ntBASIC4.96□□□□□ -1.62
HOXD8P13378 AC091979.2-201ENST00000607514 214 ntBASIC4.96□□□□□ -1.62
HOXD8P13378 AP000569.1-201ENST00000607953 591 ntTSL 2 BASIC4.96□□□□□ -1.62
HOXD8P13378 FTX_2.1-201ENST00000618816 94 ntBASIC4.96□□□□□ -1.62
HOXD8P13378 AL499616.1-201ENST00000415437 2633 ntTSL 2 BASIC4.96□□□□□ -1.62
HOXD8P13378 IQGAP2-204ENST00000502745 3404 ntTSL 2 BASIC4.96□□□□□ -1.62
HOXD8P13378 AL592182.3-201ENST00000642132 3304 ntBASIC4.96□□□□□ -1.62
HOXD8P13378 AL450326.2-201ENST00000421913 1962 ntBASIC4.96□□□□□ -1.62
HOXD8P13378 SCN11A-203ENST00000456224 5262 ntAPPRIS ALT2 TSL 5 BASIC4.96□□□□□ -1.62
HOXD8P13378 MTND5P9-201ENST00000503854 1755 ntBASIC4.96□□□□□ -1.62
HOXD8P13378 PARP11-201ENST00000228820 4424 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
HOXD8P13378 NOL8P1-201ENST00000508336 3529 ntBASIC4.96□□□□□ -1.62
HOXD8P13378 SCN11A-202ENST00000444237 5729 ntAPPRIS ALT2 TSL 5 BASIC4.96□□□□□ -1.62
HOXD8P13378 ZBTB26-202ENST00000373656 4443 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
HOXD8P13378 NADK2-203ENST00000397338 3614 ntTSL 2 BASIC4.95□□□□□ -1.62
HOXD8P13378 ERGIC2-212ENST00000611644 4961 ntTSL 5 BASIC4.95□□□□□ -1.62
HOXD8P13378 MIR331-201ENST00000362302 94 ntBASIC4.95□□□□□ -1.62
HOXD8P13378 Y_RNA.84-201ENST00000363011 104 ntBASIC4.95□□□□□ -1.62
HOXD8P13378 RNU1-83P-201ENST00000363426 164 ntBASIC4.95□□□□□ -1.62
HOXD8P13378 Y_RNA.534-201ENST00000384599 112 ntBASIC4.95□□□□□ -1.62
HOXD8P13378 AL136368.1-201ENST00000416249 401 ntTSL 2 BASIC4.95□□□□□ -1.62
HOXD8P13378 AL591043.1-201ENST00000432461 424 ntBASIC4.95□□□□□ -1.62
HOXD8P13378 AL590399.6-201ENST00000446396 307 ntBASIC4.95□□□□□ -1.62
HOXD8P13378 AL513124.1-201ENST00000450410 614 ntBASIC4.95□□□□□ -1.62
HOXD8P13378 AC098869.1-201ENST00000481627 292 ntBASIC4.95□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 83.2 ms