Protein–RNA interactions for Protein: P09326

CD48, CD48 antigen, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD48P09326 RNU1-39P-201ENST00000383897 165 ntBASIC3.05□□□□□ -1.92
CD48P09326 SNORD115-47-201ENST00000391226 86 ntBASIC3.05□□□□□ -1.92
CD48P09326 MIR1277-201ENST00000408536 78 ntBASIC3.05□□□□□ -1.92
CD48P09326 RNU6-516P-201ENST00000411381 104 ntBASIC3.05□□□□□ -1.92
CD48P09326 UBE2Q2P12-201ENST00000414573 204 ntBASIC3.05□□□□□ -1.92
CD48P09326 CCDC58P2-201ENST00000417131 366 ntBASIC3.05□□□□□ -1.92
CD48P09326 RPS15AP12-201ENST00000419498 388 ntBASIC3.05□□□□□ -1.92
CD48P09326 AC244098.2-201ENST00000422068 99 ntBASIC3.05□□□□□ -1.92
CD48P09326 PSPC1-AS2-201ENST00000423023 376 ntTSL 3 BASIC3.05□□□□□ -1.92
CD48P09326 LINC01707-201ENST00000425517 627 ntTSL 3 BASIC3.05□□□□□ -1.92
CD48P09326 MTND1P2-201ENST00000430604 821 ntBASIC3.05□□□□□ -1.92
CD48P09326 AL139415.2-201ENST00000431968 163 ntBASIC3.05□□□□□ -1.92
CD48P09326 AL596276.1-201ENST00000434465 418 ntBASIC3.05□□□□□ -1.92
CD48P09326 AL162389.1-201ENST00000449233 177 ntBASIC3.05□□□□□ -1.92
CD48P09326 RPS29P2-201ENST00000479278 136 ntBASIC3.05□□□□□ -1.92
CD48P09326 APOA2-210ENST00000491350 263 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
CD48P09326 AC135721.1-201ENST00000497954 479 ntBASIC3.05□□□□□ -1.92
CD48P09326 AC023141.12-201ENST00000512399 199 ntBASIC3.05□□□□□ -1.92
CD48P09326 Y_RNA.693-201ENST00000516641 110 ntBASIC3.05□□□□□ -1.92
CD48P09326 RN7SKP272-201ENST00000516988 232 ntBASIC3.05□□□□□ -1.92
CD48P09326 LINC00824-201ENST00000517583 805 ntTSL 5 BASIC3.05□□□□□ -1.92
CD48P09326 AP003469.3-201ENST00000518090 473 ntTSL 3 BASIC3.05□□□□□ -1.92
CD48P09326 PSMA2P1-201ENST00000526365 646 ntBASIC3.05□□□□□ -1.92
CD48P09326 DEFB108D-201ENST00000527787 222 ntBASIC3.05□□□□□ -1.92
CD48P09326 OOSP2-203ENST00000532905 496 ntAPPRIS ALT2 TSL 3 BASIC3.05□□□□□ -1.92
CD48P09326 SMILR-201ENST00000533992 553 ntTSL 4 BASIC3.05□□□□□ -1.92
CD48P09326 AL133271.1-201ENST00000538229 291 ntBASIC3.05□□□□□ -1.92
CD48P09326 AK6P1-201ENST00000540219 478 ntBASIC3.05□□□□□ -1.92
CD48P09326 RPS3AP4-201ENST00000555161 764 ntBASIC3.05□□□□□ -1.92
CD48P09326 AL359212.1-201ENST00000556608 614 ntBASIC3.05□□□□□ -1.92
CD48P09326 PWRN1-205ENST00000565295 465 ntTSL 3 BASIC3.05□□□□□ -1.92
CD48P09326 AC009145.3-201ENST00000567386 476 ntTSL 3 BASIC3.05□□□□□ -1.92
CD48P09326 AC027514.2-201ENST00000591014 637 ntTSL 3 BASIC3.05□□□□□ -1.92
CD48P09326 AC012507.3-201ENST00000603556 477 ntBASIC3.05□□□□□ -1.92
CD48P09326 AC008277.2-201ENST00000605196 797 ntBASIC3.05□□□□□ -1.92
CD48P09326 ATP5A1P2-202ENST00000616464 443 ntBASIC3.05□□□□□ -1.92
CD48P09326 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC3.05□□□□□ -1.92
CD48P09326 AL603758.1-201ENST00000618654 241 ntBASIC3.05□□□□□ -1.92
CD48P09326 LINC01090-203ENST00000632331 466 ntTSL 5 BASIC3.05□□□□□ -1.92
CD48P09326 NANOGNB-202ENST00000640040 824 ntAPPRIS ALT2 TSL 5 BASIC3.05□□□□□ -1.92
CD48P09326 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
CD48P09326 ZNF280D-201ENST00000267807 4328 ntAPPRIS P3 TSL 1 (best) BASIC3.05□□□□□ -1.92
CD48P09326 CR848007.1-201ENST00000442354 1699 ntBASIC3.04□□□□□ -1.92
CD48P09326 STAU2-225ENST00000523558 1603 ntTSL 2 BASIC3.04□□□□□ -1.92
CD48P09326 HDX-201ENST00000297977 6200 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
CD48P09326 AL050331.3-201ENST00000448740 2081 ntTSL 2 BASIC3.04□□□□□ -1.92
CD48P09326 AL353746.1-201ENST00000566293 6881 ntBASIC3.04□□□□□ -1.92
CD48P09326 DEFB114-201ENST00000322066 253 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
CD48P09326 RNU6-511P-201ENST00000363496 107 ntBASIC3.04□□□□□ -1.92
CD48P09326 RNU6-1085P-201ENST00000363576 107 ntBASIC3.04□□□□□ -1.92
CD48P09326 Y_RNA.256-201ENST00000364594 104 ntBASIC3.04□□□□□ -1.92
CD48P09326 FAM107B-204ENST00000378465 1052 ntAPPRIS P1 TSL 2 BASIC3.04□□□□□ -1.92
CD48P09326 Y_RNA.402-201ENST00000383972 102 ntBASIC3.04□□□□□ -1.92
CD48P09326 MIR135A2-201ENST00000384854 100 ntBASIC3.04□□□□□ -1.92
CD48P09326 TRAV24-201ENST00000390453 343 ntAPPRIS P1 BASIC3.04□□□□□ -1.92
CD48P09326 STAP1-202ENST00000396225 1146 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
CD48P09326 RPS4XP8-201ENST00000402039 771 ntBASIC3.04□□□□□ -1.92
CD48P09326 AL031121.1-201ENST00000406553 254 ntBASIC3.04□□□□□ -1.92
CD48P09326 ELOCP4-201ENST00000420090 333 ntBASIC3.04□□□□□ -1.92
CD48P09326 AL137014.1-201ENST00000420490 1226 ntBASIC3.04□□□□□ -1.92
CD48P09326 MTND4LP11-201ENST00000422184 280 ntBASIC3.04□□□□□ -1.92
CD48P09326 AC007283.2-201ENST00000424739 197 ntBASIC3.04□□□□□ -1.92
CD48P09326 BX005214.1-201ENST00000427327 476 ntTSL 5 BASIC3.04□□□□□ -1.92
CD48P09326 LINC01037-201ENST00000427337 424 ntTSL 5 BASIC3.04□□□□□ -1.92
CD48P09326 UBE2E2-AS1-202ENST00000430018 499 ntTSL 2 BASIC3.04□□□□□ -1.92
CD48P09326 GPR143P-201ENST00000434155 205 ntBASIC3.04□□□□□ -1.92
CD48P09326 RPS29P6-201ENST00000438196 145 ntBASIC3.04□□□□□ -1.92
CD48P09326 MTATP6P23-201ENST00000440153 476 ntBASIC3.04□□□□□ -1.92
CD48P09326 AL671855.1-201ENST00000446875 1203 ntBASIC3.04□□□□□ -1.92
CD48P09326 AL133351.1-201ENST00000456189 417 ntTSL 2 BASIC3.04□□□□□ -1.92
CD48P09326 RN7SL499P-201ENST00000481141 276 ntBASIC3.04□□□□□ -1.92
CD48P09326 UBE2Q2P9-201ENST00000490086 202 ntBASIC3.04□□□□□ -1.92
CD48P09326 FAM92A1P2-202ENST00000504766 877 ntBASIC3.04□□□□□ -1.92
CD48P09326 RPS3A-208ENST00000509736 576 ntTSL 2 BASIC3.04□□□□□ -1.92
CD48P09326 HMGN1P28-201ENST00000521340 364 ntBASIC3.04□□□□□ -1.92
CD48P09326 AC011979.2-201ENST00000527568 352 ntBASIC3.04□□□□□ -1.92
CD48P09326 AC078889.1-201ENST00000536412 523 ntTSL 2 BASIC3.04□□□□□ -1.92
CD48P09326 AC008083.1-201ENST00000547748 663 ntTSL 2 BASIC3.04□□□□□ -1.92
CD48P09326 AL121603.1-201ENST00000553815 142 ntBASIC3.04□□□□□ -1.92
CD48P09326 AC234778.2-201ENST00000566241 354 ntBASIC3.04□□□□□ -1.92
CD48P09326 AC025678.1-201ENST00000567861 338 ntBASIC3.04□□□□□ -1.92
CD48P09326 OR4K8P-201ENST00000578842 1048 ntBASIC3.04□□□□□ -1.92
CD48P09326 AC105224.1-201ENST00000587055 421 ntBASIC3.04□□□□□ -1.92
CD48P09326 AC104365.1-201ENST00000588835 394 ntTSL 5 BASIC3.04□□□□□ -1.92
CD48P09326 AC078899.3-201ENST00000599065 212 ntBASIC3.04□□□□□ -1.92
CD48P09326 AC104458.1-201ENST00000608243 463 ntBASIC3.04□□□□□ -1.92
CD48P09326 AL590491.2-201ENST00000614608 499 ntTSL 5 BASIC3.04□□□□□ -1.92
CD48P09326 SMAD5-AS1_1.1-201ENST00000619886 266 ntBASIC3.04□□□□□ -1.92
CD48P09326 MIR1321-201ENST00000637766 79 ntBASIC3.04□□□□□ -1.92
CD48P09326 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
CD48P09326 LINC01021-204ENST00000512067 1610 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
CD48P09326 MTCO1P9-201ENST00000505577 1534 ntBASIC3.03□□□□□ -1.92
CD48P09326 VBP1-204ENST00000625964 1547 ntTSL 5 BASIC3.03□□□□□ -1.92
CD48P09326 MUC7-203ENST00000456088 2479 ntAPPRIS P2 TSL 4 BASIC3.03□□□□□ -1.92
CD48P09326 CRISP1-202ENST00000335847 1911 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
CD48P09326 AF165147.1-201ENST00000433310 6103 ntTSL 2 BASIC3.03□□□□□ -1.92
CD48P09326 ARHGAP5-202ENST00000345122 9604 ntAPPRIS P3 TSL 5 BASIC3.03□□□□□ -1.92
CD48P09326 RMDN2-205ENST00000407257 2280 ntTSL 5 BASIC3.03□□□□□ -1.92
CD48P09326 HSFY1-202ENST00000309834 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC3.03□□□□□ -1.92
CD48P09326 HSFY2-202ENST00000344884 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC3.03□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 87 ms