Protein–RNA interactions for Protein: P08670

VIM, Vimentin, humanhuman

Known RBP Predictions only

Length 466 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VIMP08670 LINC00302-201ENST00000444515 302 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
VIMP08670 AL358232.1-201ENST00000448030 501 ntBASIC2.89□□□□□ -1.95
VIMP08670 AC098826.2-201ENST00000452011 651 ntBASIC2.89□□□□□ -1.95
VIMP08670 FABP5P15-201ENST00000453566 214 ntBASIC2.89□□□□□ -1.95
VIMP08670 BET1P1-201ENST00000482276 359 ntBASIC2.89□□□□□ -1.95
VIMP08670 SNORA9.3-201ENST00000516383 129 ntBASIC2.89□□□□□ -1.95
VIMP08670 RNU6-1092P-201ENST00000516955 87 ntBASIC2.89□□□□□ -1.95
VIMP08670 AF279873.4-202ENST00000521714 511 ntTSL 2 BASIC2.89□□□□□ -1.95
VIMP08670 AC011979.2-201ENST00000527568 352 ntBASIC2.89□□□□□ -1.95
VIMP08670 AC007834.2-201ENST00000536310 343 ntBASIC2.89□□□□□ -1.95
VIMP08670 EMP1-206ENST00000537612 505 ntTSL 3 BASIC2.89□□□□□ -1.95
VIMP08670 COPS2-203ENST00000542928 1580 ntTSL 2 BASIC2.89□□□□□ -1.95
VIMP08670 AL359212.1-201ENST00000556608 614 ntBASIC2.89□□□□□ -1.95
VIMP08670 LINC01491-201ENST00000558434 505 ntTSL 3 BASIC2.89□□□□□ -1.95
VIMP08670 MIR5194-201ENST00000582634 120 ntBASIC2.89□□□□□ -1.95
VIMP08670 AC009977.1-201ENST00000586015 570 ntBASIC2.89□□□□□ -1.95
VIMP08670 AC104365.1-201ENST00000588835 394 ntTSL 5 BASIC2.89□□□□□ -1.95
VIMP08670 AC008739.3-201ENST00000603262 127 ntBASIC2.89□□□□□ -1.95
VIMP08670 AC138932.5-201ENST00000617759 563 ntBASIC2.89□□□□□ -1.95
VIMP08670 UCA1.1-201ENST00000620952 75 ntBASIC2.89□□□□□ -1.95
VIMP08670 AC244100.1-202ENST00000621554 382 ntBASIC2.89□□□□□ -1.95
VIMP08670 AL359693.1-201ENST00000614959 2407 ntBASIC2.89□□□□□ -1.95
VIMP08670 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
VIMP08670 GABRG2-221ENST00000639683 3600 ntTSL 5 BASIC2.88□□□□□ -1.95
VIMP08670 RNA5SP393-201ENST00000363423 117 ntBASIC2.88□□□□□ -1.95
VIMP08670 RNU1-33P-201ENST00000364249 162 ntBASIC2.88□□□□□ -1.95
VIMP08670 SNORA7.4-201ENST00000384249 137 ntBASIC2.88□□□□□ -1.95
VIMP08670 AP003170.3-201ENST00000399123 158 ntTSL 5 BASIC2.88□□□□□ -1.95
VIMP08670 SKA2P1-201ENST00000425592 390 ntBASIC2.88□□□□□ -1.95
VIMP08670 RPL36AP53-201ENST00000432891 316 ntBASIC2.88□□□□□ -1.95
VIMP08670 HMGB3P12-201ENST00000438745 556 ntBASIC2.88□□□□□ -1.95
VIMP08670 MTND4P25-201ENST00000441039 533 ntBASIC2.88□□□□□ -1.95
VIMP08670 MRPL50P4-201ENST00000446432 475 ntBASIC2.88□□□□□ -1.95
VIMP08670 MTND1P3-201ENST00000484956 952 ntBASIC2.88□□□□□ -1.95
VIMP08670 LINC01326-201ENST00000495159 755 ntTSL 2 BASIC2.88□□□□□ -1.95
VIMP08670 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC2.88□□□□□ -1.95
VIMP08670 AC008948.1-201ENST00000506058 325 ntTSL 2 BASIC2.88□□□□□ -1.95
VIMP08670 SCARNA13-201ENST00000516672 275 ntBASIC2.88□□□□□ -1.95
VIMP08670 AC084116.3-201ENST00000519123 429 ntTSL 3 BASIC2.88□□□□□ -1.95
VIMP08670 AC068880.3-201ENST00000519185 179 ntTSL 5 BASIC2.88□□□□□ -1.95
VIMP08670 AC009435.1-201ENST00000519555 574 ntTSL 4 BASIC2.88□□□□□ -1.95
VIMP08670 OSBPL9P5-201ENST00000542581 171 ntBASIC2.88□□□□□ -1.95
VIMP08670 MRPL42-204ENST00000548545 692 ntAPPRIS ALT1 TSL 2 BASIC2.88□□□□□ -1.95
VIMP08670 AL049775.2-201ENST00000557547 558 ntTSL 4 BASIC2.88□□□□□ -1.95
VIMP08670 H3F3AP1-201ENST00000559984 334 ntBASIC2.88□□□□□ -1.95
VIMP08670 AC069061.2-202ENST00000580280 357 ntTSL 3 BASIC2.88□□□□□ -1.95
VIMP08670 UBL5P2-201ENST00000583788 219 ntBASIC2.88□□□□□ -1.95
VIMP08670 AC010620.2-201ENST00000600135 313 ntBASIC2.88□□□□□ -1.95
VIMP08670 AL356575.1-201ENST00000603008 283 ntBASIC2.88□□□□□ -1.95
VIMP08670 AC024220.1-201ENST00000603675 484 ntBASIC2.88□□□□□ -1.95
VIMP08670 AC103858.1-201ENST00000607019 476 ntTSL 3 BASIC2.88□□□□□ -1.95
VIMP08670 MIR663AHG-231ENST00000609044 590 ntTSL 5 BASIC2.88□□□□□ -1.95
VIMP08670 AL392048.1-201ENST00000613946 534 ntBASIC2.88□□□□□ -1.95
VIMP08670 AC091953.5-201ENST00000622919 233 ntBASIC2.88□□□□□ -1.95
VIMP08670 AC010297.1-201ENST00000623948 149 ntBASIC2.88□□□□□ -1.95
VIMP08670 AC025048.6-202ENST00000627667 438 ntBASIC2.88□□□□□ -1.95
VIMP08670 U2.21-201ENST00000637295 81 ntBASIC2.88□□□□□ -1.95
VIMP08670 RBBP8-202ENST00000360790 2962 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
VIMP08670 ZNF705G-201ENST00000400156 3644 ntAPPRIS P1 TSL 2 BASIC2.87□□□□□ -1.95
VIMP08670 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC2.87□□□□□ -1.95
VIMP08670 MIR22-201ENST00000362190 85 ntBASIC2.87□□□□□ -1.95
VIMP08670 RNU5E-1-201ENST00000362477 120 ntBASIC2.87□□□□□ -1.95
VIMP08670 RNA5SP124-201ENST00000362739 110 ntBASIC2.87□□□□□ -1.95
VIMP08670 RNU6-188P-201ENST00000364207 107 ntBASIC2.87□□□□□ -1.95
VIMP08670 MIR449B-201ENST00000384995 97 ntBASIC2.87□□□□□ -1.95
VIMP08670 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC2.87□□□□□ -1.95
VIMP08670 AL512633.1-201ENST00000399931 655 ntBASIC2.87□□□□□ -1.95
VIMP08670 ZNF705D-201ENST00000400078 925 ntAPPRIS P1 TSL 2 BASIC2.87□□□□□ -1.95
VIMP08670 AC023141.4-201ENST00000412031 328 ntBASIC2.87□□□□□ -1.95
VIMP08670 AL117337.1-201ENST00000412789 444 ntTSL 3 BASIC2.87□□□□□ -1.95
VIMP08670 MAGEA8-AS1-201ENST00000427671 476 ntTSL 3 BASIC2.87□□□□□ -1.95
VIMP08670 GYPB-201ENST00000429670 239 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
VIMP08670 AL135923.2-201ENST00000435444 501 ntTSL 2 BASIC2.87□□□□□ -1.95
VIMP08670 AL592182.1-201ENST00000440897 250 ntTSL 5 BASIC2.87□□□□□ -1.95
VIMP08670 AC009296.1-201ENST00000443146 155 ntBASIC2.87□□□□□ -1.95
VIMP08670 AC009961.3-201ENST00000449832 765 ntBASIC2.87□□□□□ -1.95
VIMP08670 RN7SL863P-201ENST00000462370 296 ntBASIC2.87□□□□□ -1.95
VIMP08670 RPS27AP10-201ENST00000496103 208 ntBASIC2.87□□□□□ -1.95
VIMP08670 LINC02064-202ENST00000507876 403 ntTSL 5 BASIC2.87□□□□□ -1.95
VIMP08670 TBCAP3-201ENST00000512475 312 ntBASIC2.87□□□□□ -1.95
VIMP08670 Y_RNA.672-201ENST00000516289 104 ntBASIC2.87□□□□□ -1.95
VIMP08670 RPPH1-2P-201ENST00000516688 293 ntBASIC2.87□□□□□ -1.95
VIMP08670 SNORA31.15-201ENST00000516771 132 ntBASIC2.87□□□□□ -1.95
VIMP08670 AC022634.1-201ENST00000520765 532 ntBASIC2.87□□□□□ -1.95
VIMP08670 MTCO1P47-201ENST00000523889 1271 ntBASIC2.87□□□□□ -1.95
VIMP08670 C14orf105-204ENST00000526336 598 ntTSL 4 BASIC2.87□□□□□ -1.95
VIMP08670 AC010546.1-201ENST00000569391 485 ntBASIC2.87□□□□□ -1.95
VIMP08670 AC006130.2-201ENST00000586202 326 ntBASIC2.87□□□□□ -1.95
VIMP08670 BNIP3P8-201ENST00000597863 560 ntBASIC2.87□□□□□ -1.95
VIMP08670 BNIP3P33-201ENST00000598912 569 ntBASIC2.87□□□□□ -1.95
VIMP08670 AC104763.2-201ENST00000604179 382 ntBASIC2.87□□□□□ -1.95
VIMP08670 AC005046.1-201ENST00000608515 625 ntBASIC2.87□□□□□ -1.95
VIMP08670 AL731566.2-201ENST00000618971 317 ntBASIC2.87□□□□□ -1.95
VIMP08670 MIR6810-201ENST00000622701 70 ntBASIC2.87□□□□□ -1.95
VIMP08670 AC078883.4-201ENST00000623218 367 ntBASIC2.87□□□□□ -1.95
VIMP08670 GYPB-216ENST00000638448 363 ntAPPRIS P1 TSL 1 (best) BASIC2.87□□□□□ -1.95
VIMP08670 LUZP4-201ENST00000371920 1701 ntAPPRIS P2 TSL 1 (best) BASIC2.87□□□□□ -1.95
VIMP08670 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC2.87□□□□□ -1.95
VIMP08670 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
VIMP08670 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC2.86□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 90.1 ms