Protein–RNA interactions for Protein: P08572

COL4A2, Collagen alpha-2(IV) chain, humanhuman

Predictions only

Length 1,712 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A2P08572 HMGN2P38-201ENST00000423806 265 ntBASIC1.63□□□□□ -2.15
COL4A2P08572 AL592447.1-201ENST00000447592 540 ntBASIC1.63□□□□□ -2.15
COL4A2P08572 AL163192.1-201ENST00000448858 708 ntTSL 5 BASIC1.63□□□□□ -2.15
COL4A2P08572 AC234775.1-201ENST00000454247 670 ntBASIC1.63□□□□□ -2.15
COL4A2P08572 AC093110.1-201ENST00000456363 602 ntTSL 2 BASIC1.63□□□□□ -2.15
COL4A2P08572 AC108733.1-201ENST00000479244 705 ntTSL 3 BASIC1.63□□□□□ -2.15
COL4A2P08572 AC068781.1-201ENST00000488231 618 ntBASIC1.63□□□□□ -2.15
COL4A2P08572 AC104629.1-201ENST00000494226 508 ntBASIC1.63□□□□□ -2.15
COL4A2P08572 PDC-202ENST00000497198 1174 ntTSL 1 (best) BASIC1.63□□□□□ -2.15
COL4A2P08572 AC093248.1-201ENST00000513197 417 ntTSL 2 BASIC1.63□□□□□ -2.15
COL4A2P08572 HSPE1P20-201ENST00000538133 289 ntBASIC1.63□□□□□ -2.15
COL4A2P08572 AP000753.2-201ENST00000540307 423 ntTSL 3 BASIC1.63□□□□□ -2.15
COL4A2P08572 AL163973.2-201ENST00000548096 288 ntTSL 3 BASIC1.63□□□□□ -2.15
COL4A2P08572 LINC02286-201ENST00000552425 285 ntTSL 2 BASIC1.63□□□□□ -2.15
COL4A2P08572 AL133372.3-201ENST00000553082 821 ntTSL 3 BASIC1.63□□□□□ -2.15
COL4A2P08572 AL161670.1-201ENST00000554348 137 ntBASIC1.63□□□□□ -2.15
COL4A2P08572 AC004943.1-202ENST00000558618 503 ntTSL 3 BASIC1.63□□□□□ -2.15
COL4A2P08572 AC092718.6-202ENST00000563072 408 ntTSL 2 BASIC1.63□□□□□ -2.15
COL4A2P08572 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC1.63□□□□□ -2.15
COL4A2P08572 AC010928.2-201ENST00000588017 287 ntBASIC1.63□□□□□ -2.15
COL4A2P08572 AC069304.2-201ENST00000605154 435 ntBASIC1.63□□□□□ -2.15
COL4A2P08572 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.63□□□□□ -2.15
COL4A2P08572 AC253576.2-201ENST00000618815 580 ntBASIC1.63□□□□□ -2.15
COL4A2P08572 AC120349.2-201ENST00000625002 298 ntBASIC1.63□□□□□ -2.15
COL4A2P08572 AC134980.1-208ENST00000640228 535 ntTSL 5 BASIC1.63□□□□□ -2.15
COL4A2P08572 AL136537.2-201ENST00000562049 2471 ntTSL 1 (best) BASIC1.62□□□□□ -2.15
COL4A2P08572 AC005832.2-201ENST00000538921 1430 ntBASIC1.62□□□□□ -2.15
COL4A2P08572 HTN1-201ENST00000246896 580 ntAPPRIS P1 TSL 1 (best) BASIC1.62□□□□□ -2.15
COL4A2P08572 Y_RNA.122-201ENST00000363331 96 ntBASIC1.62□□□□□ -2.15
COL4A2P08572 RNU6-560P-201ENST00000364007 108 ntBASIC1.62□□□□□ -2.15
COL4A2P08572 snoZ40.1-201ENST00000364540 72 ntBASIC1.62□□□□□ -2.15
COL4A2P08572 RNU6-1122P-201ENST00000384449 107 ntBASIC1.62□□□□□ -2.15
COL4A2P08572 SNORD65.1-201ENST00000390889 71 ntBASIC1.62□□□□□ -2.15
COL4A2P08572 AC095032.2-201ENST00000414923 418 ntTSL 2 BASIC1.62□□□□□ -2.15
COL4A2P08572 AC010967.2-201ENST00000418451 333 ntTSL 2 BASIC1.62□□□□□ -2.15
COL4A2P08572 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC1.62□□□□□ -2.15
COL4A2P08572 AC092573.2-201ENST00000434546 243 ntBASIC1.62□□□□□ -2.15
COL4A2P08572 SNRPGP6-201ENST00000451124 220 ntBASIC1.62□□□□□ -2.15
COL4A2P08572 AC108752.1-203ENST00000496674 339 ntTSL 5 BASIC1.62□□□□□ -2.15
COL4A2P08572 AC093752.1-206ENST00000511823 336 ntBASIC1.62□□□□□ -2.15
COL4A2P08572 VTRNA2-2P-201ENST00000516091 103 ntBASIC1.62□□□□□ -2.15
COL4A2P08572 AC025755.1-201ENST00000521306 278 ntBASIC1.62□□□□□ -2.15
COL4A2P08572 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC1.62□□□□□ -2.15
COL4A2P08572 DEFB130C-201ENST00000528518 237 ntTSL 1 (best) BASIC1.62□□□□□ -2.15
COL4A2P08572 RPL21P136-201ENST00000605378 396 ntBASIC1.62□□□□□ -2.15
COL4A2P08572 AC009237.15-201ENST00000610252 501 ntBASIC1.62□□□□□ -2.15
COL4A2P08572 AC025588.4-201ENST00000615802 908 ntBASIC1.62□□□□□ -2.15
COL4A2P08572 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC1.62□□□□□ -2.15
COL4A2P08572 RNU6-60P-201ENST00000364792 103 ntBASIC1.61□□□□□ -2.15
COL4A2P08572 TRAJ59-201ENST00000390480 54 ntAPPRIS P1 BASIC1.61□□□□□ -2.15
COL4A2P08572 RNU6-882P-201ENST00000391025 103 ntBASIC1.61□□□□□ -2.15
COL4A2P08572 RNA5SP354-201ENST00000391247 136 ntBASIC1.61□□□□□ -2.15
COL4A2P08572 RNU2-43P-201ENST00000410306 190 ntBASIC1.61□□□□□ -2.15
COL4A2P08572 AC092047.1-201ENST00000424997 240 ntBASIC1.61□□□□□ -2.15
COL4A2P08572 AL080248.1-201ENST00000428954 388 ntTSL 3 BASIC1.61□□□□□ -2.15
COL4A2P08572 AC044784.2-201ENST00000447297 366 ntTSL 3 BASIC1.61□□□□□ -2.15
COL4A2P08572 ARL13A-202ENST00000450049 1102 ntAPPRIS P1 TSL 5 BASIC1.61□□□□□ -2.15
COL4A2P08572 AL359385.1-201ENST00000456509 365 ntBASIC1.61□□□□□ -2.15
COL4A2P08572 AC026410.2-201ENST00000460281 156 ntBASIC1.61□□□□□ -2.15
COL4A2P08572 AC135721.1-201ENST00000497954 479 ntBASIC1.61□□□□□ -2.15
COL4A2P08572 AC011377.1-201ENST00000517708 275 ntTSL 3 BASIC1.61□□□□□ -2.15
COL4A2P08572 AC005832.3-201ENST00000537929 631 ntBASIC1.61□□□□□ -2.15
COL4A2P08572 AC015720.1-201ENST00000565251 277 ntBASIC1.61□□□□□ -2.15
COL4A2P08572 AC024614.2-201ENST00000577584 372 ntBASIC1.61□□□□□ -2.15
COL4A2P08572 AC091588.1-201ENST00000578504 359 ntTSL 3 BASIC1.61□□□□□ -2.15
COL4A2P08572 AC011451.2-201ENST00000604303 598 ntBASIC1.61□□□□□ -2.15
COL4A2P08572 AL512598.1-201ENST00000610158 273 ntBASIC1.61□□□□□ -2.15
COL4A2P08572 AC006213.4-201ENST00000616184 634 ntBASIC1.61□□□□□ -2.15
COL4A2P08572 uc_338.20-201ENST00000621563 178 ntBASIC1.61□□□□□ -2.15
COL4A2P08572 MIR1322-201ENST00000638013 71 ntBASIC1.61□□□□□ -2.15
COL4A2P08572 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC1.61□□□□□ -2.15
COL4A2P08572 CDR1-202ENST00000625883 1485 ntBASIC1.61□□□□□ -2.15
COL4A2P08572 GPBP1-201ENST00000264779 1786 ntAPPRIS ALT2 TSL 1 (best) BASIC1.61□□□□□ -2.15
COL4A2P08572 TPTE2P4-201ENST00000258589 1605 ntBASIC1.61□□□□□ -2.15
COL4A2P08572 MDM2-205ENST00000348801 798 ntTSL 1 (best) BASIC1.6□□□□□ -2.15
COL4A2P08572 RNU6-28P-201ENST00000362378 107 ntBASIC1.6□□□□□ -2.15
COL4A2P08572 RNU1-109P-201ENST00000383960 147 ntBASIC1.6□□□□□ -2.15
COL4A2P08572 RNU6-298P-201ENST00000390888 96 ntBASIC1.6□□□□□ -2.15
COL4A2P08572 RNA5SP252-201ENST00000391131 119 ntBASIC1.6□□□□□ -2.15
COL4A2P08572 TPMTP2-201ENST00000414372 726 ntBASIC1.6□□□□□ -2.15
COL4A2P08572 SDCBPP1-201ENST00000440192 890 ntBASIC1.6□□□□□ -2.15
COL4A2P08572 MTND2P20-201ENST00000440805 661 ntBASIC1.6□□□□□ -2.15
COL4A2P08572 MYCBP2-AS1-202ENST00000448470 333 ntTSL 3 BASIC1.6□□□□□ -2.15
COL4A2P08572 AC010099.1-201ENST00000455434 375 ntBASIC1.6□□□□□ -2.15
COL4A2P08572 AC055855.1-201ENST00000489563 579 ntBASIC1.6□□□□□ -2.15
COL4A2P08572 CCNG1-203ENST00000504553 732 ntTSL 3 BASIC1.6□□□□□ -2.15
COL4A2P08572 MTCYBP16-201ENST00000509187 1129 ntBASIC1.6□□□□□ -2.15
COL4A2P08572 PKIA-203ENST00000518467 588 ntAPPRIS P1 TSL 1 (best) BASIC1.6□□□□□ -2.15
COL4A2P08572 SPIC-201ENST00000551346 1132 ntAPPRIS P1 TSL 1 (best) BASIC1.6□□□□□ -2.15
COL4A2P08572 AC125611.2-201ENST00000551907 647 ntBASIC1.6□□□□□ -2.15
COL4A2P08572 AC114546.1-201ENST00000560140 473 ntTSL 3 BASIC1.6□□□□□ -2.15
COL4A2P08572 AC011260.1-201ENST00000578420 472 ntBASIC1.6□□□□□ -2.15
COL4A2P08572 LINC01899-203ENST00000584810 337 ntTSL 2 BASIC1.6□□□□□ -2.15
COL4A2P08572 AC098848.2-201ENST00000588023 330 ntBASIC1.6□□□□□ -2.15
COL4A2P08572 AC008739.2-201ENST00000597006 317 ntBASIC1.6□□□□□ -2.15
COL4A2P08572 WISP1-OT1-201ENST00000602893 642 ntBASIC1.6□□□□□ -2.15
COL4A2P08572 NUTF2P8-201ENST00000604593 363 ntBASIC1.6□□□□□ -2.15
COL4A2P08572 AC090772.4-201ENST00000623599 362 ntBASIC1.6□□□□□ -2.15
COL4A2P08572 AC106858.1-201ENST00000637497 429 ntBASIC1.6□□□□□ -2.15
COL4A2P08572 AC027514.1-201ENST00000588561 1603 ntBASIC1.6□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 104.8 ms