Protein–RNA interactions for Protein: P08254

MMP3, Stromelysin-1, humanhuman

Predictions only

Length 477 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP3P08254 AC008741.1-201ENST00000569456 510 ntTSL 3 BASIC3.49□□□□□ -1.85
MMP3P08254 AC005951.2-201ENST00000576282 495 ntBASIC3.49□□□□□ -1.85
MMP3P08254 MIR5047-201ENST00000579212 100 ntBASIC3.49□□□□□ -1.85
MMP3P08254 AC105224.1-201ENST00000587055 421 ntBASIC3.49□□□□□ -1.85
MMP3P08254 AC009271.1-202ENST00000588803 492 ntTSL 3 BASIC3.49□□□□□ -1.85
MMP3P08254 GEN1-201ENST00000317402 9854 ntAPPRIS P1 TSL 2 BASIC3.49□□□□□ -1.85
MMP3P08254 PICALM-209ENST00000528398 2049 ntTSL 2 BASIC3.49□□□□□ -1.85
MMP3P08254 EIF2AK2-204ENST00000405334 1533 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
MMP3P08254 SERPINI2-201ENST00000264677 1678 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
MMP3P08254 ZNF680P1-201ENST00000436625 1469 ntBASIC3.48□□□□□ -1.85
MMP3P08254 MYOT-201ENST00000239926 2337 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
MMP3P08254 CENPJ-205ENST00000545981 4299 ntTSL 2 BASIC3.48□□□□□ -1.85
MMP3P08254 MIR30E-201ENST00000362104 92 ntBASIC3.48□□□□□ -1.85
MMP3P08254 RNU6-108P-201ENST00000365558 107 ntBASIC3.48□□□□□ -1.85
MMP3P08254 AKR1C1-201ENST00000380859 858 ntTSL 3 BASIC3.48□□□□□ -1.85
MMP3P08254 Y_RNA.402-201ENST00000383972 102 ntBASIC3.48□□□□□ -1.85
MMP3P08254 RNU6-641P-201ENST00000384006 107 ntBASIC3.48□□□□□ -1.85
MMP3P08254 RNU6-74P-201ENST00000384235 107 ntBASIC3.48□□□□□ -1.85
MMP3P08254 SNORD15B-201ENST00000384714 146 ntBASIC3.48□□□□□ -1.85
MMP3P08254 TANK-204ENST00000403609 555 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
MMP3P08254 RHEBP3-201ENST00000411920 351 ntBASIC3.48□□□□□ -1.85
MMP3P08254 AC007390.1-201ENST00000415722 356 ntBASIC3.48□□□□□ -1.85
MMP3P08254 MTCO1P20-201ENST00000425366 358 ntBASIC3.48□□□□□ -1.85
MMP3P08254 LINC02095-201ENST00000430908 346 ntTSL 2 BASIC3.48□□□□□ -1.85
MMP3P08254 MTCO2P3-201ENST00000442543 421 ntBASIC3.48□□□□□ -1.85
MMP3P08254 MTCO3P45-201ENST00000443036 613 ntBASIC3.48□□□□□ -1.85
MMP3P08254 FTH1P25-201ENST00000447665 469 ntBASIC3.48□□□□□ -1.85
MMP3P08254 AC013269.3-201ENST00000450486 444 ntTSL 3 BASIC3.48□□□□□ -1.85
MMP3P08254 FDX1P2-201ENST00000450769 375 ntBASIC3.48□□□□□ -1.85
MMP3P08254 FGF7P6-202ENST00000451282 293 ntBASIC3.48□□□□□ -1.85
MMP3P08254 MRPS31P2-201ENST00000451581 518 ntBASIC3.48□□□□□ -1.85
MMP3P08254 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC3.48□□□□□ -1.85
MMP3P08254 AC067945.3-201ENST00000456176 386 ntTSL 5 BASIC3.48□□□□□ -1.85
MMP3P08254 MTAPP1-201ENST00000489154 819 ntBASIC3.48□□□□□ -1.85
MMP3P08254 AC069439.1-201ENST00000494739 167 ntBASIC3.48□□□□□ -1.85
MMP3P08254 AC079467.1-201ENST00000508512 503 ntTSL 3 BASIC3.48□□□□□ -1.85
MMP3P08254 LINC02174-201ENST00000508977 553 ntTSL 3 BASIC3.48□□□□□ -1.85
MMP3P08254 AC004062.1-201ENST00000509926 645 ntBASIC3.48□□□□□ -1.85
MMP3P08254 AC016550.2-202ENST00000511940 581 ntTSL 2 BASIC3.48□□□□□ -1.85
MMP3P08254 AC021491.3-201ENST00000513378 156 ntTSL 3 BASIC3.48□□□□□ -1.85
MMP3P08254 AC004053.1-201ENST00000515127 575 ntTSL 5 BASIC3.48□□□□□ -1.85
MMP3P08254 SNORA31.22-201ENST00000517204 135 ntBASIC3.48□□□□□ -1.85
MMP3P08254 LINC00824-201ENST00000517583 805 ntTSL 5 BASIC3.48□□□□□ -1.85
MMP3P08254 MTND1P35-201ENST00000526739 508 ntBASIC3.48□□□□□ -1.85
MMP3P08254 AC011979.2-201ENST00000527568 352 ntBASIC3.48□□□□□ -1.85
MMP3P08254 AC011773.2-201ENST00000551479 285 ntTSL 5 BASIC3.48□□□□□ -1.85
MMP3P08254 RPS3AP4-201ENST00000555161 764 ntBASIC3.48□□□□□ -1.85
MMP3P08254 PWRN1-205ENST00000565295 465 ntTSL 3 BASIC3.48□□□□□ -1.85
MMP3P08254 AC009145.3-201ENST00000567386 476 ntTSL 3 BASIC3.48□□□□□ -1.85
MMP3P08254 AC025678.1-201ENST00000567861 338 ntBASIC3.48□□□□□ -1.85
MMP3P08254 SNORA59B-202ENST00000578183 701 ntBASIC3.48□□□□□ -1.85
MMP3P08254 AC010928.3-201ENST00000587712 541 ntBASIC3.48□□□□□ -1.85
MMP3P08254 AC104365.1-201ENST00000588835 394 ntTSL 5 BASIC3.48□□□□□ -1.85
MMP3P08254 AC007621.1-201ENST00000604544 437 ntBASIC3.48□□□□□ -1.85
MMP3P08254 ESRRAP2-204ENST00000606337 280 ntTSL 5 BASIC3.48□□□□□ -1.85
MMP3P08254 AC017083.3-201ENST00000609955 700 ntBASIC3.48□□□□□ -1.85
MMP3P08254 DCAF17-212ENST00000611110 975 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
MMP3P08254 WFDC11-203ENST00000618797 561 ntAPPRIS P1 TSL 5 BASIC3.48□□□□□ -1.85
MMP3P08254 PCDH11X-208ENST00000504220 4017 ntAPPRIS ALT2 TSL 1 (best) BASIC3.48□□□□□ -1.85
MMP3P08254 DTHD1-205ENST00000507598 2606 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
MMP3P08254 ATXN3-248ENST00000558190 26812 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
MMP3P08254 AC005550.3-201ENST00000451240 3743 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
MMP3P08254 SLC25A46-206ENST00000509432 1596 ntTSL 2 BASIC3.47□□□□□ -1.85
MMP3P08254 LINC00907-209ENST00000593234 3376 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
MMP3P08254 AC004944.1-201ENST00000517807 3059 ntBASIC3.47□□□□□ -1.85
MMP3P08254 EVI5-201ENST00000370331 7403 ntAPPRIS P3 TSL 1 (best) BASIC3.47□□□□□ -1.85
MMP3P08254 SNORD67-201ENST00000390833 111 ntBASIC3.47□□□□□ -1.85
MMP3P08254 HSPE1P26-201ENST00000405341 275 ntBASIC3.47□□□□□ -1.85
MMP3P08254 MIR1277-201ENST00000408536 78 ntBASIC3.47□□□□□ -1.85
MMP3P08254 AC093865.1-201ENST00000415387 433 ntTSL 3 BASIC3.47□□□□□ -1.85
MMP3P08254 USP9YP27-201ENST00000418455 438 ntBASIC3.47□□□□□ -1.85
MMP3P08254 MTND4LP11-201ENST00000422184 280 ntBASIC3.47□□□□□ -1.85
MMP3P08254 LINC01707-201ENST00000425517 627 ntTSL 3 BASIC3.47□□□□□ -1.85
MMP3P08254 AP001117.1-201ENST00000428205 609 ntTSL 2 BASIC3.47□□□□□ -1.85
MMP3P08254 AL606489.2-201ENST00000433886 234 ntBASIC3.47□□□□□ -1.85
MMP3P08254 MTATP6P16-201ENST00000434543 526 ntBASIC3.47□□□□□ -1.85
MMP3P08254 HMGB3P11-201ENST00000440127 604 ntBASIC3.47□□□□□ -1.85
MMP3P08254 AL445490.2-201ENST00000440492 441 ntTSL 3 BASIC3.47□□□□□ -1.85
MMP3P08254 RPL26P6-201ENST00000440913 438 ntBASIC3.47□□□□□ -1.85
MMP3P08254 AC018816.1-203ENST00000441894 338 ntTSL 3 BASIC3.47□□□□□ -1.85
MMP3P08254 LINC01510-201ENST00000441991 468 ntTSL 3 BASIC3.47□□□□□ -1.85
MMP3P08254 MTND4P18-201ENST00000447010 465 ntBASIC3.47□□□□□ -1.85
MMP3P08254 RPL23AP20-201ENST00000447965 421 ntBASIC3.47□□□□□ -1.85
MMP3P08254 AC006512.1-201ENST00000468816 291 ntBASIC3.47□□□□□ -1.85
MMP3P08254 RN7SL330P-201ENST00000469709 307 ntBASIC3.47□□□□□ -1.85
MMP3P08254 UBE2Q2P9-201ENST00000490086 202 ntBASIC3.47□□□□□ -1.85
MMP3P08254 LINC02377-202ENST00000505436 523 ntTSL 5 BASIC3.47□□□□□ -1.85
MMP3P08254 MLLT10P2-201ENST00000506434 249 ntBASIC3.47□□□□□ -1.85
MMP3P08254 SMAD1-AS2-201ENST00000508936 1090 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
MMP3P08254 AC092673.1-201ENST00000510203 428 ntTSL 3 BASIC3.47□□□□□ -1.85
MMP3P08254 AC005921.1-201ENST00000510589 286 ntBASIC3.47□□□□□ -1.85
MMP3P08254 AC091906.1-201ENST00000511310 391 ntTSL 2 BASIC3.47□□□□□ -1.85
MMP3P08254 AC008700.1-202ENST00000513657 468 ntTSL 5 BASIC3.47□□□□□ -1.85
MMP3P08254 RNU7-51P-201ENST00000516560 62 ntBASIC3.47□□□□□ -1.85
MMP3P08254 AC068205.1-204ENST00000532989 481 ntTSL 3 BASIC3.47□□□□□ -1.85
MMP3P08254 AC084879.2-201ENST00000551656 369 ntTSL 3 BASIC3.47□□□□□ -1.85
MMP3P08254 AP005205.1-201ENST00000563503 508 ntBASIC3.47□□□□□ -1.85
MMP3P08254 AC068135.2-201ENST00000569293 1028 ntBASIC3.47□□□□□ -1.85
MMP3P08254 AC024270.4-201ENST00000570202 421 ntTSL 3 BASIC3.47□□□□□ -1.85
MMP3P08254 MIR3124-201ENST00000582636 67 ntBASIC3.47□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 119.1 ms