Protein–RNA interactions for Protein: P08100

RHO, Rhodopsin, humanhuman

Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHOP08100 PPIP5K2-217ENST00000627916 6010 ntAPPRIS ALT2 TSL 5 BASIC3.81□□□□□ -1.8
RHOP08100 SLITRK4-203ENST00000596188 8545 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
RHOP08100 ACADM-203ENST00000420607 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC3.81□□□□□ -1.8
RHOP08100 MBD5-212ENST00000627651 5610 ntTSL 5 BASIC3.81□□□□□ -1.8
RHOP08100 LINC00670-201ENST00000313495 2953 ntTSL 2 BASIC3.81□□□□□ -1.8
RHOP08100 Y_RNA.167-201ENST00000363735 109 ntBASIC3.81□□□□□ -1.8
RHOP08100 Y_RNA.431-201ENST00000384086 102 ntBASIC3.81□□□□□ -1.8
RHOP08100 MIR1302-11-201ENST00000408051 138 ntBASIC3.81□□□□□ -1.8
RHOP08100 MIR1302-9-201ENST00000408365 138 ntBASIC3.81□□□□□ -1.8
RHOP08100 MIR1302-10-201ENST00000408734 138 ntBASIC3.81□□□□□ -1.8
RHOP08100 NDUFB4P5-201ENST00000415445 361 ntBASIC3.81□□□□□ -1.8
RHOP08100 AL354751.2-201ENST00000415471 210 ntBASIC3.81□□□□□ -1.8
RHOP08100 AC244098.2-201ENST00000422068 99 ntBASIC3.81□□□□□ -1.8
RHOP08100 AC244035.3-201ENST00000428399 271 ntTSL 2 BASIC3.81□□□□□ -1.8
RHOP08100 CALM2P2-201ENST00000428512 440 ntBASIC3.81□□□□□ -1.8
RHOP08100 UBE2E2-AS1-202ENST00000430018 499 ntTSL 2 BASIC3.81□□□□□ -1.8
RHOP08100 AC011742.1-201ENST00000431448 434 ntBASIC3.81□□□□□ -1.8
RHOP08100 LINC00844-201ENST00000432535 477 ntTSL 2 BASIC3.81□□□□□ -1.8
RHOP08100 AC090774.1-201ENST00000435925 246 ntBASIC3.81□□□□□ -1.8
RHOP08100 SFTA1P-203ENST00000446372 693 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
RHOP08100 AC135371.1-201ENST00000446964 453 ntTSL 2 BASIC3.81□□□□□ -1.8
RHOP08100 RNU7-66P-201ENST00000459469 62 ntBASIC3.81□□□□□ -1.8
RHOP08100 RNU6-1208P-201ENST00000459588 107 ntBASIC3.81□□□□□ -1.8
RHOP08100 SIDT1-AS1-201ENST00000462180 465 ntTSL 3 BASIC3.81□□□□□ -1.8
RHOP08100 AC008539.1-201ENST00000507653 482 ntTSL 3 BASIC3.81□□□□□ -1.8
RHOP08100 MDM4-213ENST00000507825 481 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
RHOP08100 AC117522.3-201ENST00000507974 584 ntBASIC3.81□□□□□ -1.8
RHOP08100 AC108078.2-201ENST00000510750 236 ntBASIC3.81□□□□□ -1.8
RHOP08100 TTC39CP1-201ENST00000512513 755 ntBASIC3.81□□□□□ -1.8
RHOP08100 SNORA70.18-201ENST00000516696 98 ntBASIC3.81□□□□□ -1.8
RHOP08100 RNU6-1153P-201ENST00000516760 105 ntBASIC3.81□□□□□ -1.8
RHOP08100 AC091944.1-201ENST00000521984 449 ntTSL 3 BASIC3.81□□□□□ -1.8
RHOP08100 AC109635.4-202ENST00000531666 412 ntBASIC3.81□□□□□ -1.8
RHOP08100 AP003715.1-201ENST00000532109 435 ntTSL 3 BASIC3.81□□□□□ -1.8
RHOP08100 AP004242.1-201ENST00000533701 349 ntBASIC3.81□□□□□ -1.8
RHOP08100 AC078889.1-201ENST00000536412 523 ntTSL 2 BASIC3.81□□□□□ -1.8
RHOP08100 LINC02305-201ENST00000554142 476 ntTSL 3 BASIC3.81□□□□□ -1.8
RHOP08100 AC023510.1-201ENST00000555862 490 ntTSL 2 BASIC3.81□□□□□ -1.8
RHOP08100 AL118558.2-201ENST00000556294 238 ntBASIC3.81□□□□□ -1.8
RHOP08100 AC005034.5-201ENST00000604219 466 ntBASIC3.81□□□□□ -1.8
RHOP08100 HMGN2P28-201ENST00000606102 262 ntBASIC3.81□□□□□ -1.8
RHOP08100 MIR1302-2-201ENST00000607096 138 ntBASIC3.81□□□□□ -1.8
RHOP08100 STARD13-AS-221ENST00000608197 604 ntTSL 5 BASIC3.81□□□□□ -1.8
RHOP08100 UBE2E2-206ENST00000613545 282 ntTSL 5 BASIC3.81□□□□□ -1.8
RHOP08100 PCNP-208ENST00000627393 136 ntTSL 2 BASIC3.81□□□□□ -1.8
RHOP08100 SEMA3D-201ENST00000284136 6265 ntAPPRIS P1 TSL 5 BASIC3.81□□□□□ -1.8
RHOP08100 DSG2-AS1-202ENST00000583706 2024 ntTSL 5 BASIC3.81□□□□□ -1.8
RHOP08100 SLC16A10-201ENST00000368850 10051 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
RHOP08100 PTPN22-202ENST00000420377 2726 ntAPPRIS ALT2 TSL 1 (best) BASIC3.81□□□□□ -1.8
RHOP08100 FMN2-207ENST00000545751 1913 ntTSL 5 BASIC3.81□□□□□ -1.8
RHOP08100 RFX7-201ENST00000559447 10426 ntAPPRIS P5 TSL 5 BASIC3.81□□□□□ -1.8
RHOP08100 TPTE2P4-201ENST00000258589 1605 ntBASIC3.81□□□□□ -1.8
RHOP08100 CYP3A7-CYP3A51P-201ENST00000611620 1608 ntTSL 5 BASIC3.81□□□□□ -1.8
RHOP08100 TMCO5A-203ENST00000558158 2894 ntAPPRIS ALT2 TSL 3 BASIC3.81□□□□□ -1.8
RHOP08100 PTP4A1-205ENST00000626021 2203 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
RHOP08100 AC032011.1-201ENST00000611703 1549 ntBASIC3.8□□□□□ -1.8
RHOP08100 MTND4P14-201ENST00000435799 1354 ntBASIC3.8□□□□□ -1.8
RHOP08100 MUC7-203ENST00000456088 2479 ntAPPRIS P2 TSL 4 BASIC3.8□□□□□ -1.8
RHOP08100 MUC7-201ENST00000304887 2443 ntAPPRIS P2 TSL 1 (best) BASIC3.8□□□□□ -1.8
RHOP08100 NR3C1-206ENST00000424646 4591 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
RHOP08100 NDUFAF4-201ENST00000316149 2399 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
RHOP08100 RNU6-82P-201ENST00000363970 107 ntBASIC3.8□□□□□ -1.8
RHOP08100 SMIM11P1-201ENST00000369586 178 ntBASIC3.8□□□□□ -1.8
RHOP08100 RNU6-1227P-201ENST00000383981 107 ntBASIC3.8□□□□□ -1.8
RHOP08100 AC110754.1-201ENST00000399740 601 ntBASIC3.8□□□□□ -1.8
RHOP08100 AL583834.1-201ENST00000406943 343 ntBASIC3.8□□□□□ -1.8
RHOP08100 RNU2-43P-201ENST00000410306 190 ntBASIC3.8□□□□□ -1.8
RHOP08100 BX323014.1-201ENST00000412876 237 ntBASIC3.8□□□□□ -1.8
RHOP08100 NAP1L1P2-201ENST00000414182 1089 ntBASIC3.8□□□□□ -1.8
RHOP08100 AL078645.1-201ENST00000414377 423 ntTSL 3 BASIC3.8□□□□□ -1.8
RHOP08100 AF241725.1-201ENST00000416182 480 ntTSL 3 BASIC3.8□□□□□ -1.8
RHOP08100 USP9YP20-201ENST00000419224 558 ntBASIC3.8□□□□□ -1.8
RHOP08100 BX842559.1-201ENST00000419615 532 ntBASIC3.8□□□□□ -1.8
RHOP08100 AL451054.2-201ENST00000420896 202 ntBASIC3.8□□□□□ -1.8
RHOP08100 PPP1R11P2-201ENST00000423543 382 ntBASIC3.8□□□□□ -1.8
RHOP08100 RPL7P46-201ENST00000425129 740 ntBASIC3.8□□□□□ -1.8
RHOP08100 RPL21P112-201ENST00000434403 463 ntBASIC3.8□□□□□ -1.8
RHOP08100 LINC01757-201ENST00000435552 480 ntTSL 2 BASIC3.8□□□□□ -1.8
RHOP08100 Z83839.2-201ENST00000436294 274 ntTSL 5 BASIC3.8□□□□□ -1.8
RHOP08100 AL118496.2-201ENST00000448300 230 ntBASIC3.8□□□□□ -1.8
RHOP08100 MCHR2-AS1-203ENST00000451220 429 ntTSL 3 BASIC3.8□□□□□ -1.8
RHOP08100 BX510359.1-201ENST00000456973 237 ntBASIC3.8□□□□□ -1.8
RHOP08100 AC010631.1-201ENST00000474150 156 ntBASIC3.8□□□□□ -1.8
RHOP08100 ANKRD7-204ENST00000477532 744 ntTSL 5 BASIC3.8□□□□□ -1.8
RHOP08100 RPL32P34-201ENST00000486380 400 ntBASIC3.8□□□□□ -1.8
RHOP08100 Y_RNA.654-201ENST00000497848 106 ntBASIC3.8□□□□□ -1.8
RHOP08100 CCDC34P1-201ENST00000507441 517 ntBASIC3.8□□□□□ -1.8
RHOP08100 AC026784.1-201ENST00000507986 352 ntBASIC3.8□□□□□ -1.8
RHOP08100 AC005921.1-201ENST00000510589 286 ntBASIC3.8□□□□□ -1.8
RHOP08100 AC126768.3-201ENST00000514519 560 ntTSL 4 BASIC3.8□□□□□ -1.8
RHOP08100 AC093689.1-201ENST00000514737 246 ntTSL 5 BASIC3.8□□□□□ -1.8
RHOP08100 AC025871.1-202ENST00000518819 432 ntTSL 3 BASIC3.8□□□□□ -1.8
RHOP08100 AF117829.1-204ENST00000519854 284 ntTSL 3 BASIC3.8□□□□□ -1.8
RHOP08100 AC102945.1-201ENST00000522640 407 ntTSL 2 BASIC3.8□□□□□ -1.8
RHOP08100 MTND4P7-201ENST00000523876 130 ntBASIC3.8□□□□□ -1.8
RHOP08100 AP002892.1-201ENST00000537727 550 ntTSL 4 BASIC3.8□□□□□ -1.8
RHOP08100 CERS3-AS1-202ENST00000560718 432 ntTSL 3 BASIC3.8□□□□□ -1.8
RHOP08100 AC026462.3-202ENST00000564361 515 ntTSL 3 BASIC3.8□□□□□ -1.8
RHOP08100 ZEB2-AS1-204ENST00000595109 855 ntTSL 5 BASIC3.8□□□□□ -1.8
RHOP08100 BNIP3P25-201ENST00000596023 559 ntBASIC3.8□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 84.1 ms