Protein–RNA interactions for Protein: O95476

CTDNEP1, CTD nuclear envelope phosphatase 1, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1O95476 AL031281.1-201ENST00000604049 488 ntBASIC2.29□□□□□ -2.04
CTDNEP1O95476 AP000254.1-201ENST00000609934 520 ntBASIC2.29□□□□□ -2.04
CTDNEP1O95476 AC087683.2-201ENST00000611384 326 ntBASIC2.29□□□□□ -2.04
CTDNEP1O95476 AC245297.3-203ENST00000612135 405 ntTSL 5 BASIC2.29□□□□□ -2.04
CTDNEP1O95476 AL607023.1-201ENST00000620045 248 ntBASIC2.29□□□□□ -2.04
CTDNEP1O95476 AC017037.3-201ENST00000625016 472 ntBASIC2.29□□□□□ -2.04
CTDNEP1O95476 AC068631.1-219ENST00000625826 668 ntTSL 5 BASIC2.29□□□□□ -2.04
CTDNEP1O95476 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC2.29□□□□□ -2.04
CTDNEP1O95476 AC068544.1-201ENST00000635064 248 ntTSL 5 BASIC2.29□□□□□ -2.04
CTDNEP1O95476 AP003481.1-201ENST00000637808 351 ntTSL 5 BASIC2.29□□□□□ -2.04
CTDNEP1O95476 RNU6-1197P-201ENST00000391183 107 ntBASIC2.28□□□□□ -2.04
CTDNEP1O95476 AL445529.1-201ENST00000398713 389 ntBASIC2.28□□□□□ -2.04
CTDNEP1O95476 Z82209.1-201ENST00000422141 2135 ntBASIC2.28□□□□□ -2.04
CTDNEP1O95476 AL445669.1-201ENST00000426743 755 ntBASIC2.28□□□□□ -2.04
CTDNEP1O95476 AL139118.1-201ENST00000432707 446 ntTSL 3 BASIC2.28□□□□□ -2.04
CTDNEP1O95476 TRIM60P8Y-201ENST00000436338 762 ntBASIC2.28□□□□□ -2.04
CTDNEP1O95476 AC002386.1-201ENST00000436714 398 ntTSL 2 BASIC2.28□□□□□ -2.04
CTDNEP1O95476 ACBD3-AS1-201ENST00000440540 535 ntTSL 5 BASIC2.28□□□□□ -2.04
CTDNEP1O95476 AL353705.4-201ENST00000449661 238 ntBASIC2.28□□□□□ -2.04
CTDNEP1O95476 ANKRD26P4-201ENST00000455755 950 ntBASIC2.28□□□□□ -2.04
CTDNEP1O95476 AL139260.1-202ENST00000456813 441 ntTSL 3 BASIC2.28□□□□□ -2.04
CTDNEP1O95476 AP003497.1-201ENST00000528472 562 ntBASIC2.28□□□□□ -2.04
CTDNEP1O95476 DEFB130C-201ENST00000528518 237 ntTSL 1 (best) BASIC2.28□□□□□ -2.04
CTDNEP1O95476 AP000889.1-201ENST00000530968 660 ntBASIC2.28□□□□□ -2.04
CTDNEP1O95476 MRPL42-208ENST00000552217 920 ntAPPRIS P2 TSL 2 BASIC2.28□□□□□ -2.04
CTDNEP1O95476 AC009094.1-201ENST00000564443 426 ntBASIC2.28□□□□□ -2.04
CTDNEP1O95476 AC090616.3-201ENST00000582184 217 ntBASIC2.28□□□□□ -2.04
CTDNEP1O95476 MIR4999-201ENST00000585029 91 ntBASIC2.28□□□□□ -2.04
CTDNEP1O95476 AL353997.4-201ENST00000586196 166 ntBASIC2.28□□□□□ -2.04
CTDNEP1O95476 AL157938.2-201ENST00000587264 894 ntTSL 5 BASIC2.28□□□□□ -2.04
CTDNEP1O95476 SOX2-OT-224ENST00000595313 716 ntTSL 5 BASIC2.28□□□□□ -2.04
CTDNEP1O95476 BBIP1P1-201ENST00000602999 279 ntBASIC2.28□□□□□ -2.04
CTDNEP1O95476 DUXAP11-201ENST00000603858 526 ntBASIC2.28□□□□□ -2.04
CTDNEP1O95476 Z99289.3-201ENST00000605586 594 ntBASIC2.28□□□□□ -2.04
CTDNEP1O95476 AC063944.3-201ENST00000609969 533 ntBASIC2.28□□□□□ -2.04
CTDNEP1O95476 SATB1-AS1-227ENST00000625533 743 ntTSL 5 BASIC2.28□□□□□ -2.04
CTDNEP1O95476 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC2.28□□□□□ -2.04
CTDNEP1O95476 PABPC1P9-201ENST00000426076 1612 ntBASIC2.28□□□□□ -2.05
CTDNEP1O95476 COMMD8-201ENST00000381571 1469 ntAPPRIS P1 TSL 1 (best) BASIC2.27□□□□□ -2.05
CTDNEP1O95476 DEFB108F-201ENST00000344638 222 ntBASIC2.27□□□□□ -2.05
CTDNEP1O95476 CD80-202ENST00000383669 771 ntTSL 1 (best) BASIC2.27□□□□□ -2.05
CTDNEP1O95476 RNU6-198P-201ENST00000384258 104 ntBASIC2.27□□□□□ -2.05
CTDNEP1O95476 RNU6-882P-201ENST00000391025 103 ntBASIC2.27□□□□□ -2.05
CTDNEP1O95476 RNU6ATAC37P-201ENST00000408328 131 ntBASIC2.27□□□□□ -2.05
CTDNEP1O95476 RNA5SP508-201ENST00000411327 119 ntBASIC2.27□□□□□ -2.05
CTDNEP1O95476 AL513008.1-201ENST00000412701 161 ntTSL 5 BASIC2.27□□□□□ -2.05
CTDNEP1O95476 C5orf58-201ENST00000421269 406 ntAPPRIS ALT2 TSL 2 BASIC2.27□□□□□ -2.05
CTDNEP1O95476 AC011233.1-201ENST00000422812 283 ntBASIC2.27□□□□□ -2.05
CTDNEP1O95476 AL357375.1-201ENST00000424274 525 ntTSL 3 BASIC2.27□□□□□ -2.05
CTDNEP1O95476 AL022396.1-201ENST00000427011 386 ntTSL 3 BASIC2.27□□□□□ -2.05
CTDNEP1O95476 RAC1P7-201ENST00000445367 377 ntBASIC2.27□□□□□ -2.05
CTDNEP1O95476 DPPA3P1-201ENST00000448050 469 ntBASIC2.27□□□□□ -2.05
CTDNEP1O95476 OR6C5P-201ENST00000452388 923 ntBASIC2.27□□□□□ -2.05
CTDNEP1O95476 Z98749.1-201ENST00000454123 541 ntTSL 5 BASIC2.27□□□□□ -2.05
CTDNEP1O95476 LINC01546-201ENST00000457435 674 ntTSL 2 BASIC2.27□□□□□ -2.05
CTDNEP1O95476 LINC00709-201ENST00000458168 494 ntTSL 2 BASIC2.27□□□□□ -2.05
CTDNEP1O95476 RBM43P1-201ENST00000476891 1081 ntBASIC2.27□□□□□ -2.05
CTDNEP1O95476 AC084117.1-201ENST00000496975 270 ntTSL 5 BASIC2.27□□□□□ -2.05
CTDNEP1O95476 HTN1-204ENST00000511674 623 ntAPPRIS P1 TSL 2 BASIC2.27□□□□□ -2.05
CTDNEP1O95476 GYPA-209ENST00000512789 258 ntTSL 1 (best) BASIC2.27□□□□□ -2.05
CTDNEP1O95476 LINC02484-201ENST00000513843 546 ntTSL 5 BASIC2.27□□□□□ -2.05
CTDNEP1O95476 RNU1-41P-201ENST00000516161 162 ntBASIC2.27□□□□□ -2.05
CTDNEP1O95476 RNU1-48P-201ENST00000516400 162 ntBASIC2.27□□□□□ -2.05
CTDNEP1O95476 AC018541.1-202ENST00000518687 584 ntTSL 4 BASIC2.27□□□□□ -2.05
CTDNEP1O95476 CASP1P1-201ENST00000526345 212 ntBASIC2.27□□□□□ -2.05
CTDNEP1O95476 DEFB108D-201ENST00000527787 222 ntBASIC2.27□□□□□ -2.05
CTDNEP1O95476 IAPP-204ENST00000539393 409 ntAPPRIS P1 TSL 2 BASIC2.27□□□□□ -2.05
CTDNEP1O95476 LRRC34P1-201ENST00000542742 915 ntBASIC2.27□□□□□ -2.05
CTDNEP1O95476 AC010196.1-201ENST00000550014 450 ntTSL 5 BASIC2.27□□□□□ -2.05
CTDNEP1O95476 AC090888.2-201ENST00000559765 1144 ntBASIC2.27□□□□□ -2.05
CTDNEP1O95476 DISC1FP1-204ENST00000563681 466 ntTSL 3 BASIC2.27□□□□□ -2.05
CTDNEP1O95476 AC136618.2-201ENST00000575091 400 ntBASIC2.27□□□□□ -2.05
CTDNEP1O95476 CLECL1-204ENST00000621400 611 ntAPPRIS ALT2 TSL 5 BASIC2.27□□□□□ -2.05
CTDNEP1O95476 BIRC6-AS2-201ENST00000623382 589 ntTSL 2 BASIC2.27□□□□□ -2.05
CTDNEP1O95476 AL356596.1-201ENST00000624230 379 ntBASIC2.27□□□□□ -2.05
CTDNEP1O95476 AC007490.1-201ENST00000624321 703 ntBASIC2.27□□□□□ -2.05
CTDNEP1O95476 AL391597.2-201ENST00000635698 479 ntTSL 5 BASIC2.27□□□□□ -2.05
CTDNEP1O95476 CDK1-202ENST00000373809 1613 ntTSL 1 (best) BASIC2.27□□□□□ -2.05
CTDNEP1O95476 PLSCR5-201ENST00000443512 1969 ntAPPRIS P1 TSL 1 (best) BASIC2.27□□□□□ -2.05
CTDNEP1O95476 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC2.27□□□□□ -2.05
CTDNEP1O95476 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC2.27□□□□□ -2.05
CTDNEP1O95476 P2RY12-201ENST00000302632 1766 ntAPPRIS P1 TSL 1 (best) BASIC2.26□□□□□ -2.05
CTDNEP1O95476 ZNF883-201ENST00000619044 2051 ntAPPRIS P1 TSL 5 BASIC2.26□□□□□ -2.05
CTDNEP1O95476 RNU6-744P-201ENST00000365557 107 ntBASIC2.26□□□□□ -2.05
CTDNEP1O95476 RNU6-1316P-201ENST00000384242 108 ntBASIC2.26□□□□□ -2.05
CTDNEP1O95476 RNU6-193P-201ENST00000410977 107 ntBASIC2.26□□□□□ -2.05
CTDNEP1O95476 MRLN-201ENST00000414264 422 ntAPPRIS P2 TSL 1 (best) BASIC2.26□□□□□ -2.05
CTDNEP1O95476 AL391704.1-203ENST00000414903 462 ntTSL 3 BASIC2.26□□□□□ -2.05
CTDNEP1O95476 AC010099.3-201ENST00000423896 409 ntBASIC2.26□□□□□ -2.05
CTDNEP1O95476 MTND1P20-201ENST00000430341 950 ntBASIC2.26□□□□□ -2.05
CTDNEP1O95476 AC092573.2-201ENST00000434546 243 ntBASIC2.26□□□□□ -2.05
CTDNEP1O95476 RSU1P2-202ENST00000437884 485 ntBASIC2.26□□□□□ -2.05
CTDNEP1O95476 AL121871.1-201ENST00000443413 436 ntBASIC2.26□□□□□ -2.05
CTDNEP1O95476 LINC00529-201ENST00000443854 241 ntTSL 2 BASIC2.26□□□□□ -2.05
CTDNEP1O95476 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC2.26□□□□□ -2.05
CTDNEP1O95476 MTCYBP3-201ENST00000445588 1137 ntBASIC2.26□□□□□ -2.05
CTDNEP1O95476 MYCBP2-AS1-202ENST00000448470 333 ntTSL 3 BASIC2.26□□□□□ -2.05
CTDNEP1O95476 AL160287.1-201ENST00000455612 432 ntTSL 3 BASIC2.26□□□□□ -2.05
CTDNEP1O95476 C1orf185-202ENST00000467127 747 ntAPPRIS ALT2 TSL 3 BASIC2.26□□□□□ -2.05
CTDNEP1O95476 RPL30P5-201ENST00000494923 336 ntBASIC2.26□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 97.8 ms