Protein–RNA interactions for Protein: O95292

VAPB, Vesicle-associated membrane protein-associated protein B/C, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAPBO95292 AC096638.1-201ENST00000444678 216 ntBASIC2.01□□□□□ -2.09
VAPBO95292 SFTA1P-203ENST00000446372 693 ntTSL 1 (best) BASIC2.01□□□□□ -2.09
VAPBO95292 AL353705.4-201ENST00000449661 238 ntBASIC2.01□□□□□ -2.09
VAPBO95292 PSPHP1-201ENST00000450062 261 ntBASIC2.01□□□□□ -2.09
VAPBO95292 RPL18AP17-201ENST00000455326 198 ntBASIC2.01□□□□□ -2.09
VAPBO95292 AC080013.2-201ENST00000460866 323 ntBASIC2.01□□□□□ -2.09
VAPBO95292 KLF3P2-201ENST00000465138 268 ntBASIC2.01□□□□□ -2.09
VAPBO95292 PDC-202ENST00000497198 1174 ntTSL 1 (best) BASIC2.01□□□□□ -2.09
VAPBO95292 AC008549.1-201ENST00000512900 643 ntBASIC2.01□□□□□ -2.09
VAPBO95292 MTCO3P27-201ENST00000514397 196 ntBASIC2.01□□□□□ -2.09
VAPBO95292 RN7SKP31-201ENST00000516354 278 ntBASIC2.01□□□□□ -2.09
VAPBO95292 RNA5SP364-201ENST00000516938 78 ntBASIC2.01□□□□□ -2.09
VAPBO95292 AL138976.2-201ENST00000563989 694 ntBASIC2.01□□□□□ -2.09
VAPBO95292 AC005774.1-201ENST00000565247 567 ntTSL 4 BASIC2.01□□□□□ -2.09
VAPBO95292 MIR5089-201ENST00000580047 84 ntBASIC2.01□□□□□ -2.09
VAPBO95292 AC068025.2-201ENST00000584958 419 ntTSL 5 BASIC2.01□□□□□ -2.09
VAPBO95292 STARD13-AS-208ENST00000589472 859 ntTSL 5 BASIC2.01□□□□□ -2.09
VAPBO95292 AC004805.2-201ENST00000605382 482 ntBASIC2.01□□□□□ -2.09
VAPBO95292 TUG1_2.1-201ENST00000614234 87 ntBASIC2.01□□□□□ -2.09
VAPBO95292 C3orf49-203ENST00000616659 876 ntAPPRIS ALT2 TSL 5 BASIC2.01□□□□□ -2.09
VAPBO95292 AC098657.3-201ENST00000620434 263 ntBASIC2.01□□□□□ -2.09
VAPBO95292 AL356094.1-201ENST00000624663 1212 ntBASIC2.01□□□□□ -2.09
VAPBO95292 AP003485.1-201ENST00000625093 753 ntBASIC2.01□□□□□ -2.09
VAPBO95292 MIR219B-201ENST00000637023 88 ntBASIC2.01□□□□□ -2.09
VAPBO95292 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC2.01□□□□□ -2.09
VAPBO95292 ADAM3A-203ENST00000461344 2157 ntBASIC2□□□□□ -2.09
VAPBO95292 HSFY2-201ENST00000304790 1444 ntAPPRIS P5 TSL 1 (best) BASIC2□□□□□ -2.09
VAPBO95292 HSFY1-201ENST00000307393 1444 ntAPPRIS P5 TSL 1 (best) BASIC2□□□□□ -2.09
VAPBO95292 HMGB1-201ENST00000326004 821 ntTSL 3 BASIC2□□□□□ -2.09
VAPBO95292 RPL17P50-201ENST00000396131 546 ntBASIC2□□□□□ -2.09
VAPBO95292 MTCO1P56-201ENST00000401674 224 ntBASIC2□□□□□ -2.09
VAPBO95292 RN7SKP223-201ENST00000410582 62 ntBASIC2□□□□□ -2.09
VAPBO95292 RPL17P12-201ENST00000413391 526 ntBASIC2□□□□□ -2.09
VAPBO95292 UBE2FP1-201ENST00000416536 447 ntBASIC2□□□□□ -2.09
VAPBO95292 LINC02331-201ENST00000418927 602 ntTSL 5 BASIC2□□□□□ -2.09
VAPBO95292 AL109913.1-201ENST00000421173 514 ntBASIC2□□□□□ -2.09
VAPBO95292 BX276092.3-201ENST00000424182 230 ntBASIC2□□□□□ -2.09
VAPBO95292 GYPB-201ENST00000429670 239 ntTSL 1 (best) BASIC2□□□□□ -2.09
VAPBO95292 AC017048.2-201ENST00000431455 822 ntTSL 3 BASIC2□□□□□ -2.09
VAPBO95292 NDUFAF4P2-201ENST00000445374 520 ntBASIC2□□□□□ -2.09
VAPBO95292 AC013267.1-201ENST00000458227 267 ntBASIC2□□□□□ -2.09
VAPBO95292 RPL37P6-201ENST00000460682 294 ntBASIC2□□□□□ -2.09
VAPBO95292 AC117462.1-201ENST00000461186 554 ntTSL 4 BASIC2□□□□□ -2.09
VAPBO95292 TRBV1-201ENST00000476502 284 ntBASIC2□□□□□ -2.09
VAPBO95292 UBA6-AS1-204ENST00000502758 547 ntTSL 4 BASIC2□□□□□ -2.09
VAPBO95292 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC2□□□□□ -2.09
VAPBO95292 LINC02173-201ENST00000504132 521 ntTSL 2 BASIC2□□□□□ -2.09
VAPBO95292 RNU6-390P-201ENST00000516259 103 ntBASIC2□□□□□ -2.09
VAPBO95292 AC068880.3-201ENST00000519185 179 ntTSL 5 BASIC2□□□□□ -2.09
VAPBO95292 AC021698.1-201ENST00000524858 716 ntTSL 3 BASIC2□□□□□ -2.09
VAPBO95292 AP003497.1-201ENST00000528472 562 ntBASIC2□□□□□ -2.09
VAPBO95292 LINC00301-204ENST00000532591 470 ntTSL 2 BASIC2□□□□□ -2.09
VAPBO95292 CYCSP26-201ENST00000534107 320 ntBASIC2□□□□□ -2.09
VAPBO95292 AL133241.1-201ENST00000556832 487 ntBASIC2□□□□□ -2.09
VAPBO95292 AL136298.1-201ENST00000557371 566 ntTSL 3 BASIC2□□□□□ -2.09
VAPBO95292 AC012379.1-201ENST00000558304 406 ntTSL 3 BASIC2□□□□□ -2.09
VAPBO95292 AC087286.1-201ENST00000560712 568 ntTSL 3 BASIC2□□□□□ -2.09
VAPBO95292 AC105245.1-201ENST00000581934 244 ntBASIC2□□□□□ -2.09
VAPBO95292 MIR3935-201ENST00000583472 104 ntBASIC2□□□□□ -2.09
VAPBO95292 BX546450.2-201ENST00000602419 435 ntTSL 5 BASIC2□□□□□ -2.09
VAPBO95292 AC025165.5-201ENST00000602802 578 ntBASIC2□□□□□ -2.09
VAPBO95292 THRA1/BTR-203ENST00000604191 571 ntTSL 4 BASIC2□□□□□ -2.09
VAPBO95292 APOOP1-201ENST00000604695 592 ntBASIC2□□□□□ -2.09
VAPBO95292 AL031601.2-202ENST00000622650 282 ntBASIC2□□□□□ -2.09
VAPBO95292 AC010149.2-201ENST00000637608 315 ntBASIC2□□□□□ -2.09
VAPBO95292 GYPB-216ENST00000638448 363 ntAPPRIS P1 TSL 1 (best) BASIC2□□□□□ -2.09
VAPBO95292 TRAPPC13-204ENST00000438419 1437 ntAPPRIS P4 TSL 1 (best) BASIC2□□□□□ -2.09
VAPBO95292 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC1.99□□□□□ -2.09
VAPBO95292 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC1.99□□□□□ -2.09
VAPBO95292 LINC01592-202ENST00000518540 2367 ntTSL 2 BASIC1.99□□□□□ -2.09
VAPBO95292 MTND5P29-201ENST00000458676 1807 ntBASIC1.99□□□□□ -2.09
VAPBO95292 AC004944.1-201ENST00000517807 3059 ntBASIC1.99□□□□□ -2.09
VAPBO95292 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC1.99□□□□□ -2.09
VAPBO95292 RNU6-343P-201ENST00000364709 104 ntBASIC1.99□□□□□ -2.09
VAPBO95292 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC1.99□□□□□ -2.09
VAPBO95292 RPL26P27-201ENST00000414397 437 ntBASIC1.99□□□□□ -2.09
VAPBO95292 AL391839.1-201ENST00000417447 265 ntTSL 2 BASIC1.99□□□□□ -2.09
VAPBO95292 AC092660.1-201ENST00000420648 371 ntTSL 2 BASIC1.99□□□□□ -2.09
VAPBO95292 LINC01676-201ENST00000420901 410 ntTSL 3 BASIC1.99□□□□□ -2.09
VAPBO95292 AL356277.2-201ENST00000421318 441 ntTSL 2 BASIC1.99□□□□□ -2.09
VAPBO95292 DPH3P2-201ENST00000422618 250 ntBASIC1.99□□□□□ -2.09
VAPBO95292 AL139415.2-201ENST00000431968 163 ntBASIC1.99□□□□□ -2.09
VAPBO95292 FAM103A2P-201ENST00000444122 354 ntBASIC1.99□□□□□ -2.09
VAPBO95292 AC009299.3-202ENST00000445372 538 ntTSL 3 BASIC1.99□□□□□ -2.09
VAPBO95292 AC017099.1-201ENST00000448261 1028 ntBASIC1.99□□□□□ -2.09
VAPBO95292 PCDH9-AS4-201ENST00000456459 436 ntTSL 3 BASIC1.99□□□□□ -2.09
VAPBO95292 MCCC1-AS1-201ENST00000471731 765 ntTSL 5 BASIC1.99□□□□□ -2.09
VAPBO95292 AC092902.1-201ENST00000486999 259 ntBASIC1.99□□□□□ -2.09
VAPBO95292 PGRMC2-204ENST00000503872 1028 ntTSL 3 BASIC1.99□□□□□ -2.09
VAPBO95292 LTV1P1-201ENST00000510683 1237 ntBASIC1.99□□□□□ -2.09
VAPBO95292 AC108517.1-201ENST00000512546 327 ntTSL 3 BASIC1.99□□□□□ -2.09
VAPBO95292 AC110760.3-202ENST00000515177 371 ntBASIC1.99□□□□□ -2.09
VAPBO95292 RNU7-193P-201ENST00000516723 65 ntBASIC1.99□□□□□ -2.09
VAPBO95292 SNORD19.2-201ENST00000516978 73 ntBASIC1.99□□□□□ -2.09
VAPBO95292 C14orf105-204ENST00000526336 598 ntTSL 4 BASIC1.99□□□□□ -2.09
VAPBO95292 OR11H5P-201ENST00000554039 926 ntBASIC1.99□□□□□ -2.09
VAPBO95292 TIMM9-203ENST00000555061 598 ntAPPRIS P1 TSL 1 (best) BASIC1.99□□□□□ -2.09
VAPBO95292 AC126407.1-201ENST00000563044 566 ntTSL 4 BASIC1.99□□□□□ -2.09
VAPBO95292 AP005671.1-201ENST00000581798 463 ntTSL 3 BASIC1.99□□□□□ -2.09
VAPBO95292 MIR4435-1-201ENST00000582552 80 ntBASIC1.99□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 84.1 ms