Protein–RNA interactions for Protein: O95096

NKX2-2, Homeobox protein Nkx-2.2, humanhuman

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-2O95096 AC024022.1-202ENST00000508911 394 ntTSL 2 BASIC3.13□□□□□ -1.91
NKX2-2O95096 CSN1S2AP-204ENST00000512167 671 ntTSL 3 BASIC3.13□□□□□ -1.91
NKX2-2O95096 RNU6-123P-201ENST00000516163 102 ntBASIC3.13□□□□□ -1.91
NKX2-2O95096 LINC00824-201ENST00000517583 805 ntTSL 5 BASIC3.13□□□□□ -1.91
NKX2-2O95096 UTP23-205ENST00000520733 369 ntTSL 3 BASIC3.13□□□□□ -1.91
NKX2-2O95096 NDUFB9P3-201ENST00000521269 501 ntBASIC3.13□□□□□ -1.91
NKX2-2O95096 AP000873.2-206ENST00000529811 429 ntTSL 2 BASIC3.13□□□□□ -1.91
NKX2-2O95096 AP000867.2-201ENST00000532468 320 ntBASIC3.13□□□□□ -1.91
NKX2-2O95096 AC100763.1-201ENST00000532735 522 ntTSL 3 BASIC3.13□□□□□ -1.91
NKX2-2O95096 CLEC2D-214ENST00000543300 399 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
NKX2-2O95096 OR5V1-216ENST00000543825 1048 ntAPPRIS P1 BASIC3.13□□□□□ -1.91
NKX2-2O95096 CLEC2D-216ENST00000545918 288 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
NKX2-2O95096 GLYCAM1-202ENST00000546607 553 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
NKX2-2O95096 G2E3-AS1-204ENST00000552511 402 ntTSL 2 BASIC3.13□□□□□ -1.91
NKX2-2O95096 AL163153.1-201ENST00000554223 283 ntBASIC3.13□□□□□ -1.91
NKX2-2O95096 AC092120.1-201ENST00000562211 420 ntTSL 3 BASIC3.13□□□□□ -1.91
NKX2-2O95096 MIR3158-1-201ENST00000583596 81 ntBASIC3.13□□□□□ -1.91
NKX2-2O95096 AC005357.2-201ENST00000586473 583 ntTSL 2 BASIC3.13□□□□□ -1.91
NKX2-2O95096 AC015911.6-201ENST00000588445 457 ntTSL 3 BASIC3.13□□□□□ -1.91
NKX2-2O95096 AC022601.1-201ENST00000596954 577 ntTSL 4 BASIC3.13□□□□□ -1.91
NKX2-2O95096 AC003973.1-201ENST00000600071 546 ntTSL 4 BASIC3.13□□□□□ -1.91
NKX2-2O95096 AC004805.2-201ENST00000605382 482 ntBASIC3.13□□□□□ -1.91
NKX2-2O95096 MIR15A-201ENST00000607334 83 ntBASIC3.13□□□□□ -1.91
NKX2-2O95096 U3.45-201ENST00000607547 219 ntBASIC3.13□□□□□ -1.91
NKX2-2O95096 uc_338.11-201ENST00000619132 160 ntBASIC3.13□□□□□ -1.91
NKX2-2O95096 AC011155.2-201ENST00000623202 216 ntBASIC3.13□□□□□ -1.91
NKX2-2O95096 AC139792.3-201ENST00000623525 224 ntBASIC3.13□□□□□ -1.91
NKX2-2O95096 TEX41-300ENST00000631048 69 ntTSL 5 BASIC3.13□□□□□ -1.91
NKX2-2O95096 SLC27A2-203ENST00000544960 2025 ntTSL 2 BASIC3.13□□□□□ -1.91
NKX2-2O95096 RAPGEF6-202ENST00000308008 4176 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
NKX2-2O95096 PCDH11X-208ENST00000504220 4017 ntAPPRIS ALT2 TSL 1 (best) BASIC3.13□□□□□ -1.91
NKX2-2O95096 ABCC9-202ENST00000261201 4650 ntAPPRIS ALT1 TSL 5 BASIC3.13□□□□□ -1.91
NKX2-2O95096 PROS1-203ENST00000407433 3335 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
NKX2-2O95096 SLC5A3-201ENST00000381151 11576 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
NKX2-2O95096 BCLAF3-202ENST00000379682 3217 ntAPPRIS ALT2 TSL 5 BASIC3.12□□□□□ -1.91
NKX2-2O95096 KIAA0586-215ENST00000619722 5597 ntAPPRIS ALT2 TSL 2 BASIC3.12□□□□□ -1.91
NKX2-2O95096 RNMT-206ENST00000589866 1879 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
NKX2-2O95096 LINC00305-201ENST00000323355 873 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
NKX2-2O95096 RNA5SP197-201ENST00000363357 119 ntBASIC3.12□□□□□ -1.91
NKX2-2O95096 SNORA62.3-201ENST00000365110 153 ntBASIC3.12□□□□□ -1.91
NKX2-2O95096 MIR200C-201ENST00000384980 68 ntBASIC3.12□□□□□ -1.91
NKX2-2O95096 MIR181A1-201ENST00000385026 110 ntBASIC3.12□□□□□ -1.91
NKX2-2O95096 TRAV40-201ENST00000390467 317 ntAPPRIS P1 BASIC3.12□□□□□ -1.91
NKX2-2O95096 RNA5SP252-201ENST00000391131 119 ntBASIC3.12□□□□□ -1.91
NKX2-2O95096 AC068050.1-201ENST00000394891 380 ntBASIC3.12□□□□□ -1.91
NKX2-2O95096 AC068295.1-201ENST00000413056 153 ntTSL 3 BASIC3.12□□□□□ -1.91
NKX2-2O95096 AC003985.1-201ENST00000414127 362 ntTSL 3 BASIC3.12□□□□□ -1.91
NKX2-2O95096 AL109914.1-201ENST00000414740 146 ntTSL 5 BASIC3.12□□□□□ -1.91
NKX2-2O95096 AC099548.1-201ENST00000421443 426 ntBASIC3.12□□□□□ -1.91
NKX2-2O95096 HIGD1AP11-201ENST00000438361 280 ntBASIC3.12□□□□□ -1.91
NKX2-2O95096 AL137789.1-201ENST00000439443 682 ntTSL 3 BASIC3.12□□□□□ -1.91
NKX2-2O95096 DPPA3P1-201ENST00000448050 469 ntBASIC3.12□□□□□ -1.91
NKX2-2O95096 AP000431.2-201ENST00000450653 790 ntTSL 2 BASIC3.12□□□□□ -1.91
NKX2-2O95096 AC069549.1-201ENST00000451584 499 ntTSL 3 BASIC3.12□□□□□ -1.91
NKX2-2O95096 ELOCP23-201ENST00000452014 332 ntBASIC3.12□□□□□ -1.91
NKX2-2O95096 LINC00571-203ENST00000454060 525 ntTSL 3 BASIC3.12□□□□□ -1.91
NKX2-2O95096 RPL12P25-201ENST00000455592 494 ntBASIC3.12□□□□□ -1.91
NKX2-2O95096 AC046136.1-201ENST00000459855 533 ntTSL 3 BASIC3.12□□□□□ -1.91
NKX2-2O95096 AC093663.1-201ENST00000497190 394 ntBASIC3.12□□□□□ -1.91
NKX2-2O95096 SUMO2P6-201ENST00000505273 288 ntBASIC3.12□□□□□ -1.91
NKX2-2O95096 RBBP4P6-201ENST00000508098 202 ntBASIC3.12□□□□□ -1.91
NKX2-2O95096 AC105417.1-201ENST00000514691 285 ntBASIC3.12□□□□□ -1.91
NKX2-2O95096 SNORA67.7-201ENST00000516664 135 ntBASIC3.12□□□□□ -1.91
NKX2-2O95096 RNU6-143P-201ENST00000516942 93 ntBASIC3.12□□□□□ -1.91
NKX2-2O95096 RNU6-711P-201ENST00000517255 106 ntBASIC3.12□□□□□ -1.91
NKX2-2O95096 AP003122.3-201ENST00000526316 255 ntBASIC3.12□□□□□ -1.91
NKX2-2O95096 HTN3-202ENST00000526767 578 ntAPPRIS P2 TSL 1 (best) BASIC3.12□□□□□ -1.91
NKX2-2O95096 AC084851.1-201ENST00000529105 249 ntBASIC3.12□□□□□ -1.91
NKX2-2O95096 RANP3-201ENST00000530970 276 ntBASIC3.12□□□□□ -1.91
NKX2-2O95096 AC005476.1-201ENST00000554427 397 ntBASIC3.12□□□□□ -1.91
NKX2-2O95096 ZNF519P2-201ENST00000557032 169 ntBASIC3.12□□□□□ -1.91
NKX2-2O95096 AC009269.4-201ENST00000557828 440 ntTSL 3 BASIC3.12□□□□□ -1.91
NKX2-2O95096 AC009269.3-201ENST00000558429 472 ntTSL 5 BASIC3.12□□□□□ -1.91
NKX2-2O95096 TPRKBP2-201ENST00000565969 475 ntBASIC3.12□□□□□ -1.91
NKX2-2O95096 AC008536.2-201ENST00000607284 349 ntBASIC3.12□□□□□ -1.91
NKX2-2O95096 AC092954.2-201ENST00000609103 430 ntBASIC3.12□□□□□ -1.91
NKX2-2O95096 BX664730.1-201ENST00000616196 800 ntTSL 5 BASIC3.12□□□□□ -1.91
NKX2-2O95096 AL356321.1-201ENST00000621360 228 ntBASIC3.12□□□□□ -1.91
NKX2-2O95096 AC073308.1-201ENST00000623696 305 ntBASIC3.12□□□□□ -1.91
NKX2-2O95096 CR381653.2-201ENST00000624041 768 ntBASIC3.12□□□□□ -1.91
NKX2-2O95096 AC068631.1-221ENST00000626006 592 ntTSL 5 BASIC3.12□□□□□ -1.91
NKX2-2O95096 U6.114-201ENST00000636407 96 ntBASIC3.12□□□□□ -1.91
NKX2-2O95096 Z99571.1-201ENST00000636677 394 ntBASIC3.12□□□□□ -1.91
NKX2-2O95096 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC3.12□□□□□ -1.91
NKX2-2O95096 TUSC7-203ENST00000477539 2415 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
NKX2-2O95096 GPR183-201ENST00000376414 1700 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
NKX2-2O95096 AC233263.6-201ENST00000631132 1963 ntBASIC3.11□□□□□ -1.91
NKX2-2O95096 TBC1D15-210ENST00000485960 2489 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
NKX2-2O95096 LRFN5-204ENST00000554171 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC3.11□□□□□ -1.91
NKX2-2O95096 NXPE1-204ENST00000536271 2289 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
NKX2-2O95096 ZFYVE16-202ENST00000505560 6599 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
NKX2-2O95096 AL139276.1-201ENST00000311910 1001 ntBASIC3.11□□□□□ -1.91
NKX2-2O95096 Y_RNA.6-201ENST00000362350 114 ntBASIC3.11□□□□□ -1.91
NKX2-2O95096 SNORA14A-201ENST00000364773 135 ntBASIC3.11□□□□□ -1.91
NKX2-2O95096 Y_RNA.481-201ENST00000384373 102 ntBASIC3.11□□□□□ -1.91
NKX2-2O95096 MIR301A-201ENST00000385261 86 ntBASIC3.11□□□□□ -1.91
NKX2-2O95096 TRAJ59-201ENST00000390480 54 ntAPPRIS P1 BASIC3.11□□□□□ -1.91
NKX2-2O95096 RPL17P50-201ENST00000396131 546 ntBASIC3.11□□□□□ -1.91
NKX2-2O95096 MIR888-201ENST00000401186 77 ntBASIC3.11□□□□□ -1.91
NKX2-2O95096 RNU2-68P-201ENST00000410878 191 ntBASIC3.11□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 142.1 ms