Protein–RNA interactions for Protein: O76039

CDKL5, Cyclin-dependent kinase-like 5, humanhuman

Predictions only

Length 1,030 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5O76039 MTND4P19-201ENST00000446659 478 ntBASIC4.06□□□□□ -1.76
CDKL5O76039 PPP1R2P5-201ENST00000457256 603 ntBASIC4.06□□□□□ -1.76
CDKL5O76039 RNU7-182P-201ENST00000459009 62 ntBASIC4.06□□□□□ -1.76
CDKL5O76039 AC008539.1-201ENST00000507653 482 ntTSL 3 BASIC4.06□□□□□ -1.76
CDKL5O76039 SEMA6A-AS1-204ENST00000510682 521 ntTSL 5 BASIC4.06□□□□□ -1.76
CDKL5O76039 RN7SKP13-201ENST00000515933 244 ntBASIC4.06□□□□□ -1.76
CDKL5O76039 RPL7P20-201ENST00000520308 745 ntBASIC4.06□□□□□ -1.76
CDKL5O76039 AP005639.2-201ENST00000527592 928 ntBASIC4.06□□□□□ -1.76
CDKL5O76039 AP000462.3-201ENST00000545593 330 ntTSL 5 BASIC4.06□□□□□ -1.76
CDKL5O76039 AC011773.2-201ENST00000551479 285 ntTSL 5 BASIC4.06□□□□□ -1.76
CDKL5O76039 LINC02286-201ENST00000552425 285 ntTSL 2 BASIC4.06□□□□□ -1.76
CDKL5O76039 AC026462.3-202ENST00000564361 515 ntTSL 3 BASIC4.06□□□□□ -1.76
CDKL5O76039 MIR4425-201ENST00000580572 84 ntBASIC4.06□□□□□ -1.76
CDKL5O76039 LINC01909-202ENST00000584919 815 ntTSL 3 BASIC4.06□□□□□ -1.76
CDKL5O76039 ZEB2-AS1-204ENST00000595109 855 ntTSL 5 BASIC4.06□□□□□ -1.76
CDKL5O76039 AC113139.1-201ENST00000605049 239 ntBASIC4.06□□□□□ -1.76
CDKL5O76039 AL603758.1-201ENST00000618654 241 ntBASIC4.06□□□□□ -1.76
CDKL5O76039 PPIG-207ENST00000448752 2498 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
CDKL5O76039 PALMD-205ENST00000615664 1844 ntTSL 5 BASIC4.06□□□□□ -1.76
CDKL5O76039 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC4.06□□□□□ -1.76
CDKL5O76039 LINC02493-201ENST00000509964 1704 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
CDKL5O76039 EVI5-208ENST00000540033 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC4.06□□□□□ -1.76
CDKL5O76039 AC091152.2-201ENST00000591628 2569 ntBASIC4.06□□□□□ -1.76
CDKL5O76039 ZNF734P-201ENST00000419494 1534 ntBASIC4.05□□□□□ -1.76
CDKL5O76039 LRMP-221ENST00000636465 4540 ntAPPRIS ALT2 TSL 5 BASIC4.05□□□□□ -1.76
CDKL5O76039 CNTN6-201ENST00000350110 3814 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
CDKL5O76039 KCNH7-204ENST00000618399 3713 ntTSL 5 BASIC4.05□□□□□ -1.76
CDKL5O76039 AL139276.1-201ENST00000311910 1001 ntBASIC4.05□□□□□ -1.76
CDKL5O76039 RNU6-522P-201ENST00000364497 107 ntBASIC4.05□□□□□ -1.76
CDKL5O76039 RNU6-1029P-201ENST00000384109 107 ntBASIC4.05□□□□□ -1.76
CDKL5O76039 RNU6-339P-201ENST00000384310 107 ntBASIC4.05□□□□□ -1.76
CDKL5O76039 RNU6-278P-201ENST00000390945 109 ntBASIC4.05□□□□□ -1.76
CDKL5O76039 UBE2V1P2-201ENST00000397758 440 ntBASIC4.05□□□□□ -1.76
CDKL5O76039 AL606923.1-201ENST00000406616 190 ntBASIC4.05□□□□□ -1.76
CDKL5O76039 RNU4-26P-201ENST00000410270 107 ntBASIC4.05□□□□□ -1.76
CDKL5O76039 RNU2-36P-201ENST00000410361 191 ntBASIC4.05□□□□□ -1.76
CDKL5O76039 AC007314.1-201ENST00000414538 565 ntTSL 4 BASIC4.05□□□□□ -1.76
CDKL5O76039 DBIP2-201ENST00000419076 262 ntBASIC4.05□□□□□ -1.76
CDKL5O76039 NCOR1P3-201ENST00000420479 303 ntBASIC4.05□□□□□ -1.76
CDKL5O76039 HSPE1P1-201ENST00000421494 318 ntBASIC4.05□□□□□ -1.76
CDKL5O76039 AL353729.1-201ENST00000425044 720 ntBASIC4.05□□□□□ -1.76
CDKL5O76039 AL589935.1-209ENST00000432050 418 ntTSL 5 BASIC4.05□□□□□ -1.76
CDKL5O76039 AL035634.1-201ENST00000446768 372 ntTSL 2 BASIC4.05□□□□□ -1.76
CDKL5O76039 AL133547.1-201ENST00000448546 220 ntBASIC4.05□□□□□ -1.76
CDKL5O76039 AL118520.1-201ENST00000450770 291 ntBASIC4.05□□□□□ -1.76
CDKL5O76039 AC007967.1-201ENST00000455422 1159 ntBASIC4.05□□□□□ -1.76
CDKL5O76039 AL162395.1-201ENST00000457882 422 ntBASIC4.05□□□□□ -1.76
CDKL5O76039 TAF8-207ENST00000482432 556 ntTSL 2 BASIC4.05□□□□□ -1.76
CDKL5O76039 ATP6V1G3-204ENST00000489986 449 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
CDKL5O76039 AC099520.1-202ENST00000503650 777 ntTSL 3 BASIC4.05□□□□□ -1.76
CDKL5O76039 AC104619.4-201ENST00000510773 249 ntBASIC4.05□□□□□ -1.76
CDKL5O76039 LINC02374-202ENST00000515222 578 ntTSL 4 BASIC4.05□□□□□ -1.76
CDKL5O76039 RN7SKP60-201ENST00000516985 239 ntBASIC4.05□□□□□ -1.76
CDKL5O76039 RNU6-64P-201ENST00000517119 105 ntBASIC4.05□□□□□ -1.76
CDKL5O76039 RN7SKP256-201ENST00000517201 314 ntBASIC4.05□□□□□ -1.76
CDKL5O76039 AC091944.1-201ENST00000521984 449 ntTSL 3 BASIC4.05□□□□□ -1.76
CDKL5O76039 AC060765.1-201ENST00000522776 544 ntTSL 4 BASIC4.05□□□□□ -1.76
CDKL5O76039 AC022790.1-201ENST00000522872 204 ntBASIC4.05□□□□□ -1.76
CDKL5O76039 DEFB130C-201ENST00000528518 237 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
CDKL5O76039 AC026771.1-201ENST00000564672 415 ntTSL 2 BASIC4.05□□□□□ -1.76
CDKL5O76039 AP001972.3-202ENST00000603012 375 ntTSL 3 BASIC4.05□□□□□ -1.76
CDKL5O76039 AC006557.5-201ENST00000603126 811 ntBASIC4.05□□□□□ -1.76
CDKL5O76039 IGKV1OR2-6-201ENST00000603485 277 ntBASIC4.05□□□□□ -1.76
CDKL5O76039 SOX2-OT-255ENST00000630150 649 ntTSL 5 BASIC4.05□□□□□ -1.76
CDKL5O76039 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
CDKL5O76039 TAB3P1-202ENST00000452645 1634 ntBASIC4.05□□□□□ -1.76
CDKL5O76039 WRN-201ENST00000298139 5215 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
CDKL5O76039 FOXP2-224ENST00000635534 4290 ntTSL 5 BASIC4.05□□□□□ -1.76
CDKL5O76039 NXPE1-204ENST00000536271 2289 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
CDKL5O76039 SPAM1-205ENST00000439500 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC4.05□□□□□ -1.76
CDKL5O76039 GEN1-201ENST00000317402 9854 ntAPPRIS P1 TSL 2 BASIC4.04□□□□□ -1.76
CDKL5O76039 RTTN-201ENST00000255674 6960 ntTSL 5 BASIC4.04□□□□□ -1.76
CDKL5O76039 ZNF682-207ENST00000595736 1710 ntTSL 2 BASIC4.04□□□□□ -1.76
CDKL5O76039 LINC00907-209ENST00000593234 3376 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
CDKL5O76039 PAPOLA-202ENST00000392990 2588 ntTSL 5 BASIC4.04□□□□□ -1.76
CDKL5O76039 RNA5SP124-201ENST00000362739 110 ntBASIC4.04□□□□□ -1.76
CDKL5O76039 RNU6-1078P-201ENST00000364522 103 ntBASIC4.04□□□□□ -1.76
CDKL5O76039 TSHB-202ENST00000369517 474 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
CDKL5O76039 RAB9AP3-201ENST00000412737 573 ntBASIC4.04□□□□□ -1.76
CDKL5O76039 AL451054.2-201ENST00000420896 202 ntBASIC4.04□□□□□ -1.76
CDKL5O76039 RPL30P3-201ENST00000424262 333 ntBASIC4.04□□□□□ -1.76
CDKL5O76039 NCOA7-AS1-201ENST00000429007 501 ntTSL 3 BASIC4.04□□□□□ -1.76
CDKL5O76039 AC002386.1-201ENST00000436714 398 ntTSL 2 BASIC4.04□□□□□ -1.76
CDKL5O76039 TXNP1-201ENST00000441872 371 ntBASIC4.04□□□□□ -1.76
CDKL5O76039 AC016696.1-201ENST00000446949 318 ntBASIC4.04□□□□□ -1.76
CDKL5O76039 RAB9AP1-201ENST00000449393 573 ntBASIC4.04□□□□□ -1.76
CDKL5O76039 MTND1P9-201ENST00000453775 944 ntBASIC4.04□□□□□ -1.76
CDKL5O76039 AC112229.2-201ENST00000456683 476 ntTSL 5 BASIC4.04□□□□□ -1.76
CDKL5O76039 HMGB3P30-201ENST00000457863 606 ntBASIC4.04□□□□□ -1.76
CDKL5O76039 RPL37P6-202ENST00000464216 403 ntBASIC4.04□□□□□ -1.76
CDKL5O76039 LINC00492-201ENST00000504436 593 ntTSL 3 BASIC4.04□□□□□ -1.76
CDKL5O76039 FAM206BP-201ENST00000510179 541 ntBASIC4.04□□□□□ -1.76
CDKL5O76039 AC092542.1-201ENST00000513155 355 ntTSL 2 BASIC4.04□□□□□ -1.76
CDKL5O76039 RNU2-10P-201ENST00000516375 211 ntBASIC4.04□□□□□ -1.76
CDKL5O76039 RNU2-58P-201ENST00000516403 183 ntBASIC4.04□□□□□ -1.76
CDKL5O76039 RNU1-45P-201ENST00000517191 141 ntBASIC4.04□□□□□ -1.76
CDKL5O76039 AC093331.1-201ENST00000521474 169 ntBASIC4.04□□□□□ -1.76
CDKL5O76039 AC006065.3-201ENST00000541769 419 ntTSL 5 BASIC4.04□□□□□ -1.76
CDKL5O76039 AC007513.1-201ENST00000548740 379 ntTSL 3 BASIC4.04□□□□□ -1.76
CDKL5O76039 AL118558.2-201ENST00000556294 238 ntBASIC4.04□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 107.5 ms