Protein–RNA interactions for Protein: O75400

PRPF40A, Pre-mRNA-processing factor 40 homolog A, humanhuman

Known RBP Predictions only

Length 957 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40AO75400 Y_RNA.145-201ENST00000363527 102 ntBASIC4.97□□□□□ -1.61
PRPF40AO75400 Y_RNA.245-201ENST00000364493 95 ntBASIC4.97□□□□□ -1.61
PRPF40AO75400 RNU6-1040P-201ENST00000383974 107 ntBASIC4.97□□□□□ -1.61
PRPF40AO75400 RNU6-890P-201ENST00000384121 107 ntBASIC4.97□□□□□ -1.61
PRPF40AO75400 RNU6-306P-201ENST00000384617 107 ntBASIC4.97□□□□□ -1.61
PRPF40AO75400 RNU6ATAC5P-201ENST00000388104 126 ntBASIC4.97□□□□□ -1.61
PRPF40AO75400 Y_RNA.594-201ENST00000410373 140 ntBASIC4.97□□□□□ -1.61
PRPF40AO75400 AL353621.1-201ENST00000418219 243 ntBASIC4.97□□□□□ -1.61
PRPF40AO75400 CYP4F29P-201ENST00000420685 446 ntBASIC4.97□□□□□ -1.61
PRPF40AO75400 PMCHL1-202ENST00000423102 261 ntBASIC4.97□□□□□ -1.61
PRPF40AO75400 NDUFB4P7-201ENST00000423198 363 ntBASIC4.97□□□□□ -1.61
PRPF40AO75400 RPL21P66-201ENST00000426566 466 ntBASIC4.97□□□□□ -1.61
PRPF40AO75400 ARHGAP26-IT1-201ENST00000433186 388 ntTSL 3 BASIC4.97□□□□□ -1.61
PRPF40AO75400 AC236972.1-201ENST00000433225 199 ntBASIC4.97□□□□□ -1.61
PRPF40AO75400 USP9YP7-201ENST00000436723 430 ntBASIC4.97□□□□□ -1.61
PRPF40AO75400 AL137792.2-201ENST00000443484 235 ntBASIC4.97□□□□□ -1.61
PRPF40AO75400 RANP8-201ENST00000444720 713 ntBASIC4.97□□□□□ -1.61
PRPF40AO75400 USP9YP32-201ENST00000452432 430 ntBASIC4.97□□□□□ -1.61
PRPF40AO75400 C10orf128-207ENST00000474718 614 ntAPPRIS P3 TSL 1 (best) BASIC4.97□□□□□ -1.61
PRPF40AO75400 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC4.97□□□□□ -1.61
PRPF40AO75400 CEACAMP10-202ENST00000495431 496 ntBASIC4.97□□□□□ -1.61
PRPF40AO75400 AC110767.1-201ENST00000508374 239 ntTSL 3 BASIC4.97□□□□□ -1.61
PRPF40AO75400 AC113385.1-201ENST00000511468 563 ntTSL 4 BASIC4.97□□□□□ -1.61
PRPF40AO75400 AC092436.3-201ENST00000511788 257 ntBASIC4.97□□□□□ -1.61
PRPF40AO75400 AC026782.1-201ENST00000512952 449 ntBASIC4.97□□□□□ -1.61
PRPF40AO75400 UTP23-205ENST00000520733 369 ntTSL 3 BASIC4.97□□□□□ -1.61
PRPF40AO75400 AC125603.1-201ENST00000552718 366 ntTSL 3 BASIC4.97□□□□□ -1.61
PRPF40AO75400 LINC01028-202ENST00000588782 458 ntTSL 3 BASIC4.97□□□□□ -1.61
PRPF40AO75400 AP000942.4-201ENST00000604811 241 ntBASIC4.97□□□□□ -1.61
PRPF40AO75400 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC4.97□□□□□ -1.61
PRPF40AO75400 AC092608.2-201ENST00000624427 218 ntBASIC4.97□□□□□ -1.61
PRPF40AO75400 FGD4-211ENST00000531134 2924 ntTSL 2 BASIC4.97□□□□□ -1.61
PRPF40AO75400 RPS6KA6-204ENST00000620340 8169 ntTSL 5 BASIC4.97□□□□□ -1.61
PRPF40AO75400 AJ009632.2-204ENST00000635621 1401 ntTSL 5 BASIC4.97□□□□□ -1.61
PRPF40AO75400 PNISR-201ENST00000369239 5112 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
PRPF40AO75400 KCNJ1-202ENST00000324036 2614 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.61
PRPF40AO75400 GABRG2-210ENST00000638772 7669 ntTSL 5 BASIC4.96□□□□□ -1.61
PRPF40AO75400 CACNB4-257ENST00000637547 7658 ntTSL 5 BASIC4.96□□□□□ -1.62
PRPF40AO75400 SLC26A7-209ENST00000617078 5094 ntTSL 5 BASIC4.96□□□□□ -1.62
PRPF40AO75400 EFHC1-205ENST00000538167 5308 ntTSL 5 BASIC4.96□□□□□ -1.62
PRPF40AO75400 Y_RNA.112-201ENST00000363250 102 ntBASIC4.96□□□□□ -1.62
PRPF40AO75400 SNORA37-201ENST00000384504 129 ntBASIC4.96□□□□□ -1.62
PRPF40AO75400 MIR708-201ENST00000390708 88 ntBASIC4.96□□□□□ -1.62
PRPF40AO75400 Z99755.1-201ENST00000414048 380 ntBASIC4.96□□□□□ -1.62
PRPF40AO75400 AL080313.1-201ENST00000434947 405 ntTSL 2 BASIC4.96□□□□□ -1.62
PRPF40AO75400 AL357873.1-201ENST00000449215 282 ntTSL 3 BASIC4.96□□□□□ -1.62
PRPF40AO75400 RPL7P42-201ENST00000481005 679 ntBASIC4.96□□□□□ -1.62
PRPF40AO75400 ARHGEF3-AS1-202ENST00000495939 336 ntTSL 3 BASIC4.96□□□□□ -1.62
PRPF40AO75400 HHIP-AS1-203ENST00000512359 646 ntTSL 3 BASIC4.96□□□□□ -1.62
PRPF40AO75400 Y_RNA.670-201ENST00000516255 105 ntBASIC4.96□□□□□ -1.62
PRPF40AO75400 RNU4ATAC6P-201ENST00000516592 126 ntBASIC4.96□□□□□ -1.62
PRPF40AO75400 RNA5SP290-201ENST00000517133 127 ntBASIC4.96□□□□□ -1.62
PRPF40AO75400 RNA5SP291-201ENST00000517222 105 ntBASIC4.96□□□□□ -1.62
PRPF40AO75400 AC105999.1-201ENST00000518722 473 ntTSL 3 BASIC4.96□□□□□ -1.62
PRPF40AO75400 AC104576.1-201ENST00000524225 88 ntBASIC4.96□□□□□ -1.62
PRPF40AO75400 TMCO5B-203ENST00000529623 509 ntTSL 4 BASIC4.96□□□□□ -1.62
PRPF40AO75400 AC007948.1-201ENST00000581632 242 ntTSL 5 BASIC4.96□□□□□ -1.62
PRPF40AO75400 AL354984.3-201ENST00000604803 325 ntBASIC4.96□□□□□ -1.62
PRPF40AO75400 ELOCP5-201ENST00000604924 333 ntBASIC4.96□□□□□ -1.62
PRPF40AO75400 MIR6798-201ENST00000612887 67 ntBASIC4.96□□□□□ -1.62
PRPF40AO75400 AC011890.2-201ENST00000613393 294 ntBASIC4.96□□□□□ -1.62
PRPF40AO75400 AL161423.1-201ENST00000613700 262 ntBASIC4.96□□□□□ -1.62
PRPF40AO75400 DLEU2_5.1-201ENST00000615567 84 ntBASIC4.96□□□□□ -1.62
PRPF40AO75400 SNORD39.4-201ENST00000620099 78 ntBASIC4.96□□□□□ -1.62
PRPF40AO75400 AL591030.1-201ENST00000626131 627 ntTSL 3 BASIC4.96□□□□□ -1.62
PRPF40AO75400 CD80-201ENST00000264246 2725 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
PRPF40AO75400 SLC17A4-203ENST00000439485 3699 ntTSL 5 BASIC4.96□□□□□ -1.62
PRPF40AO75400 IFI16-208ENST00000448393 2245 ntAPPRIS ALT2 TSL 5 BASIC4.96□□□□□ -1.62
PRPF40AO75400 DNAH12-202ENST00000351747 9542 ntTSL 5 BASIC4.96□□□□□ -1.62
PRPF40AO75400 FAM197Y9-201ENST00000451062 2332 ntTSL 5 BASIC4.95□□□□□ -1.62
PRPF40AO75400 DMD-230ENST00000620040 13746 ntAPPRIS ALT2 TSL 5 BASIC4.95□□□□□ -1.62
PRPF40AO75400 UBE4A-201ENST00000252108 6103 ntAPPRIS ALT1 TSL 1 (best) BASIC4.95□□□□□ -1.62
PRPF40AO75400 RNU6-1329P-201ENST00000365664 107 ntBASIC4.95□□□□□ -1.62
PRPF40AO75400 DPRX-201ENST00000376650 648 ntAPPRIS P1 TSL 3 BASIC4.95□□□□□ -1.62
PRPF40AO75400 Y_RNA.473-201ENST00000384333 102 ntBASIC4.95□□□□□ -1.62
PRPF40AO75400 MIR3065-201ENST00000390137 79 ntBASIC4.95□□□□□ -1.62
PRPF40AO75400 RNU6-1025P-201ENST00000410629 104 ntBASIC4.95□□□□□ -1.62
PRPF40AO75400 Z85995.1-201ENST00000415547 335 ntBASIC4.95□□□□□ -1.62
PRPF40AO75400 AL158156.1-201ENST00000422509 473 ntBASIC4.95□□□□□ -1.62
PRPF40AO75400 AL645568.3-201ENST00000433683 316 ntBASIC4.95□□□□□ -1.62
PRPF40AO75400 AC105398.1-201ENST00000446073 402 ntTSL 5 BASIC4.95□□□□□ -1.62
PRPF40AO75400 AC011897.1-201ENST00000450715 346 ntTSL 3 BASIC4.95□□□□□ -1.62
PRPF40AO75400 AL645608.2-201ENST00000458555 471 ntTSL 2 BASIC4.95□□□□□ -1.62
PRPF40AO75400 AC104164.2-201ENST00000496953 495 ntBASIC4.95□□□□□ -1.62
PRPF40AO75400 AC078918.1-201ENST00000498515 228 ntBASIC4.95□□□□□ -1.62
PRPF40AO75400 AC026780.2-201ENST00000503489 730 ntTSL 5 BASIC4.95□□□□□ -1.62
PRPF40AO75400 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC4.95□□□□□ -1.62
PRPF40AO75400 AC063950.1-201ENST00000552036 308 ntBASIC4.95□□□□□ -1.62
PRPF40AO75400 AC008737.2-201ENST00000599446 118 ntBASIC4.95□□□□□ -1.62
PRPF40AO75400 AL589935.1-202ENST00000612512 393 ntTSL 5 BASIC4.95□□□□□ -1.62
PRPF40AO75400 QSER1-201ENST00000399302 9335 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
PRPF40AO75400 MRPL42-206ENST00000549982 15582 ntAPPRIS P2 TSL 1 (best) BASIC4.95□□□□□ -1.62
PRPF40AO75400 FAM49B-212ENST00000519110 1902 ntAPPRIS P1 TSL 5 BASIC4.95□□□□□ -1.62
PRPF40AO75400 VPS13C-202ENST00000261517 13400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.95□□□□□ -1.62
PRPF40AO75400 TAB3-204ENST00000378932 3698 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
PRPF40AO75400 KCNJ16-209ENST00000589377 3684 ntAPPRIS P1 TSL 5 BASIC4.94□□□□□ -1.62
PRPF40AO75400 Y_RNA.324-201ENST00000365165 102 ntBASIC4.94□□□□□ -1.62
PRPF40AO75400 AL732292.1-201ENST00000426692 226 ntBASIC4.94□□□□□ -1.62
PRPF40AO75400 AC097713.2-201ENST00000430199 356 ntBASIC4.94□□□□□ -1.62
PRPF40AO75400 RPS24P13-201ENST00000442520 397 ntBASIC4.94□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 103.9 ms