Protein–RNA interactions for Protein: O75379

VAMP4, Vesicle-associated membrane protein 4, humanhuman

Predictions only

Length 141 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP4O75379 AF241725.1-201ENST00000416182 480 ntTSL 3 BASIC4.74□□□□□ -1.65
VAMP4O75379 Z82205.1-201ENST00000428456 297 ntBASIC4.74□□□□□ -1.65
VAMP4O75379 FAR2P1-203ENST00000440931 187 ntTSL 2 BASIC4.74□□□□□ -1.65
VAMP4O75379 LINC01077-201ENST00000452288 413 ntTSL 3 BASIC4.74□□□□□ -1.65
VAMP4O75379 snoU13.3-201ENST00000459441 104 ntBASIC4.74□□□□□ -1.65
VAMP4O75379 DNAJC12-205ENST00000483798 769 ntTSL 3 BASIC4.74□□□□□ -1.65
VAMP4O75379 AC092994.1-201ENST00000498604 279 ntTSL 3 BASIC4.74□□□□□ -1.65
VAMP4O75379 MDM4-213ENST00000507825 481 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
VAMP4O75379 RNU6-1095P-201ENST00000516148 108 ntBASIC4.74□□□□□ -1.65
VAMP4O75379 AC087439.1-201ENST00000517920 398 ntTSL 3 BASIC4.74□□□□□ -1.65
VAMP4O75379 AC113192.5-201ENST00000528779 486 ntTSL 2 BASIC4.74□□□□□ -1.65
VAMP4O75379 AC023824.4-201ENST00000562572 476 ntTSL 3 BASIC4.74□□□□□ -1.65
VAMP4O75379 AC124303.1-201ENST00000605703 360 ntBASIC4.74□□□□□ -1.65
VAMP4O75379 AC243312.2-201ENST00000623340 601 ntBASIC4.74□□□□□ -1.65
VAMP4O75379 AL359757.2-201ENST00000624309 274 ntBASIC4.74□□□□□ -1.65
VAMP4O75379 ZNF99-201ENST00000397104 3114 ntAPPRIS P1 TSL 5 BASIC4.74□□□□□ -1.65
VAMP4O75379 TRIM36-201ENST00000282369 4050 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
VAMP4O75379 SUCNR1-201ENST00000362032 4181 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
VAMP4O75379 RBBP6-202ENST00000348022 5739 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
VAMP4O75379 THOC1-219ENST00000616322 2078 ntAPPRIS ALT1 TSL 5 BASIC4.73□□□□□ -1.65
VAMP4O75379 AC021355.1-202ENST00000519996 1633 ntTSL 2 BASIC4.73□□□□□ -1.65
VAMP4O75379 RAD17-206ENST00000358030 2648 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
VAMP4O75379 RNU6-1160P-201ENST00000384546 104 ntBASIC4.73□□□□□ -1.65
VAMP4O75379 RNU6-1127P-201ENST00000384580 107 ntBASIC4.73□□□□□ -1.65
VAMP4O75379 RPL21P17-201ENST00000397467 475 ntBASIC4.73□□□□□ -1.65
VAMP4O75379 MIR548F5-201ENST00000408421 86 ntBASIC4.73□□□□□ -1.65
VAMP4O75379 AL035423.1-201ENST00000420331 213 ntBASIC4.73□□□□□ -1.65
VAMP4O75379 AC093106.2-201ENST00000428212 385 ntBASIC4.73□□□□□ -1.65
VAMP4O75379 AL590399.6-201ENST00000446396 307 ntBASIC4.73□□□□□ -1.65
VAMP4O75379 AL133481.3-201ENST00000456546 333 ntTSL 3 BASIC4.73□□□□□ -1.65
VAMP4O75379 HMGB3P30-201ENST00000457863 606 ntBASIC4.73□□□□□ -1.65
VAMP4O75379 RN7SL93P-201ENST00000463035 293 ntBASIC4.73□□□□□ -1.65
VAMP4O75379 AC010631.1-201ENST00000474150 156 ntBASIC4.73□□□□□ -1.65
VAMP4O75379 RPL21P93-201ENST00000480465 489 ntBASIC4.73□□□□□ -1.65
VAMP4O75379 MEPE-206ENST00000511670 550 ntTSL 4 BASIC4.73□□□□□ -1.65
VAMP4O75379 RPL39P5-202ENST00000512505 151 ntBASIC4.73□□□□□ -1.65
VAMP4O75379 AC093689.1-201ENST00000514737 246 ntTSL 5 BASIC4.73□□□□□ -1.65
VAMP4O75379 Vault.1-201ENST00000516474 102 ntBASIC4.73□□□□□ -1.65
VAMP4O75379 RNU6-256P-201ENST00000516747 97 ntBASIC4.73□□□□□ -1.65
VAMP4O75379 RN7SKP209-201ENST00000516888 304 ntBASIC4.73□□□□□ -1.65
VAMP4O75379 AP000755.2-201ENST00000526777 571 ntTSL 5 BASIC4.73□□□□□ -1.65
VAMP4O75379 RANP3-201ENST00000530970 276 ntBASIC4.73□□□□□ -1.65
VAMP4O75379 AP000763.2-201ENST00000540641 163 ntBASIC4.73□□□□□ -1.65
VAMP4O75379 AL132780.1-202ENST00000548322 591 ntTSL 4 BASIC4.73□□□□□ -1.65
VAMP4O75379 AC009292.2-201ENST00000558889 291 ntTSL 5 BASIC4.73□□□□□ -1.65
VAMP4O75379 MIR3672-201ENST00000584290 82 ntBASIC4.73□□□□□ -1.65
VAMP4O75379 LINC02210-208ENST00000585118 546 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
VAMP4O75379 AC092747.3-201ENST00000603769 301 ntBASIC4.73□□□□□ -1.65
VAMP4O75379 AL034351.1-201ENST00000605288 668 ntBASIC4.73□□□□□ -1.65
VAMP4O75379 uc_338.32-201ENST00000615087 172 ntBASIC4.73□□□□□ -1.65
VAMP4O75379 AC007998.5-201ENST00000622938 237 ntBASIC4.73□□□□□ -1.65
VAMP4O75379 CR392039.5-201ENST00000623201 510 ntBASIC4.73□□□□□ -1.65
VAMP4O75379 CASC1-203ENST00000395987 2363 ntAPPRIS P3 TSL 1 (best) BASIC4.73□□□□□ -1.65
VAMP4O75379 FAT3-204ENST00000525166 18699 ntTSL 5 BASIC4.73□□□□□ -1.65
VAMP4O75379 SYNE2-204ENST00000358025 21842 ntAPPRIS P3 TSL 5 BASIC4.73□□□□□ -1.65
VAMP4O75379 AL050331.3-201ENST00000448740 2081 ntTSL 2 BASIC4.73□□□□□ -1.65
VAMP4O75379 FAM169A-201ENST00000389156 5990 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
VAMP4O75379 AC007685.1-201ENST00000329806 452 ntBASIC4.72□□□□□ -1.65
VAMP4O75379 Y_RNA.187-201ENST00000363918 113 ntBASIC4.72□□□□□ -1.65
VAMP4O75379 CRP-202ENST00000368110 667 ntTSL 3 BASIC4.72□□□□□ -1.65
VAMP4O75379 HSPE1P8-201ENST00000406997 288 ntBASIC4.72□□□□□ -1.65
VAMP4O75379 LIMS1-AS1-201ENST00000411710 477 ntTSL 3 BASIC4.72□□□□□ -1.65
VAMP4O75379 RPL37P10-201ENST00000412884 288 ntBASIC4.72□□□□□ -1.65
VAMP4O75379 AL137014.1-201ENST00000420490 1226 ntBASIC4.72□□□□□ -1.65
VAMP4O75379 AL022396.1-201ENST00000427011 386 ntTSL 3 BASIC4.72□□□□□ -1.65
VAMP4O75379 AC244035.3-201ENST00000428399 271 ntTSL 2 BASIC4.72□□□□□ -1.65
VAMP4O75379 LINC02095-201ENST00000430908 346 ntTSL 2 BASIC4.72□□□□□ -1.65
VAMP4O75379 FABP5P14-201ENST00000437273 393 ntBASIC4.72□□□□□ -1.65
VAMP4O75379 RPL29P29-201ENST00000448725 423 ntBASIC4.72□□□□□ -1.65
VAMP4O75379 RPL7P43-201ENST00000478876 753 ntBASIC4.72□□□□□ -1.65
VAMP4O75379 AL163540.1-201ENST00000485382 386 ntBASIC4.72□□□□□ -1.65
VAMP4O75379 RNU6-189P-201ENST00000516120 101 ntBASIC4.72□□□□□ -1.65
VAMP4O75379 SNORA67.7-201ENST00000516664 135 ntBASIC4.72□□□□□ -1.65
VAMP4O75379 Y_RNA.711-201ENST00000516993 102 ntBASIC4.72□□□□□ -1.65
VAMP4O75379 RNA5SP454-201ENST00000517231 127 ntBASIC4.72□□□□□ -1.65
VAMP4O75379 AC090592.1-203ENST00000533942 575 ntTSL 3 BASIC4.72□□□□□ -1.65
VAMP4O75379 AC093012.1-202ENST00000549403 582 ntBASIC4.72□□□□□ -1.65
VAMP4O75379 AC027288.1-203ENST00000552167 567 ntTSL 4 BASIC4.72□□□□□ -1.65
VAMP4O75379 AC007151.1-201ENST00000572774 483 ntBASIC4.72□□□□□ -1.65
VAMP4O75379 MIR486-1-201ENST00000612171 68 ntBASIC4.72□□□□□ -1.65
VAMP4O75379 LINC01378-205ENST00000615833 158 ntTSL 5 BASIC4.72□□□□□ -1.65
VAMP4O75379 AC097478.4-201ENST00000615968 522 ntTSL 5 BASIC4.72□□□□□ -1.65
VAMP4O75379 LINC02086-205ENST00000628749 679 ntTSL 5 BASIC4.72□□□□□ -1.65
VAMP4O75379 TET2-204ENST00000413648 4973 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
VAMP4O75379 NUP35-201ENST00000295119 1633 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
VAMP4O75379 POLK-217ENST00000515295 1438 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
VAMP4O75379 NUDT12-201ENST00000230792 3492 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.65
VAMP4O75379 POSTN-203ENST00000379747 3373 ntAPPRIS P3 TSL 1 (best) BASIC4.71□□□□□ -1.65
VAMP4O75379 SKIL-201ENST00000259119 3057 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.65
VAMP4O75379 MAP3K7-202ENST00000369325 4633 ntTSL 1 (best) BASIC4.71□□□□□ -1.65
VAMP4O75379 LINC01247-201ENST00000448901 4209 ntTSL 1 (best) BASIC4.71□□□□□ -1.65
VAMP4O75379 YWHAZ-201ENST00000353245 2829 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
VAMP4O75379 PLCZ1-209ENST00000539875 1398 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
VAMP4O75379 CD84-206ENST00000368054 8181 ntAPPRIS P3 TSL 1 (best) BASIC4.71□□□□□ -1.66
VAMP4O75379 OR10A7-201ENST00000326258 951 ntAPPRIS P1 BASIC4.71□□□□□ -1.66
VAMP4O75379 RNU6-1155P-201ENST00000363554 107 ntBASIC4.71□□□□□ -1.66
VAMP4O75379 SNORA33.2-201ENST00000365413 134 ntBASIC4.71□□□□□ -1.66
VAMP4O75379 MIR135A2-201ENST00000384854 100 ntBASIC4.71□□□□□ -1.66
VAMP4O75379 RNU6ATAC-201ENST00000408749 126 ntBASIC4.71□□□□□ -1.66
VAMP4O75379 AL139396.1-201ENST00000421137 167 ntBASIC4.71□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 109.4 ms