Protein–RNA interactions for Protein: O75056

SDC3, Syndecan-3, humanhuman

Predictions only

Length 442 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDC3O75056 RNA5SP68-201ENST00000363885 119 ntBASIC2.66□□□□□ -1.98
SDC3O75056 RNU6-501P-201ENST00000364072 100 ntBASIC2.66□□□□□ -1.98
SDC3O75056 SNORD56.5-201ENST00000364281 72 ntBASIC2.66□□□□□ -1.98
SDC3O75056 RNU6-217P-201ENST00000384164 104 ntBASIC2.66□□□□□ -1.98
SDC3O75056 FO393413.1-201ENST00000402892 195 ntBASIC2.66□□□□□ -1.98
SDC3O75056 RNU2-33P-201ENST00000410344 192 ntBASIC2.66□□□□□ -1.98
SDC3O75056 AL590730.1-201ENST00000426283 398 ntTSL 3 BASIC2.66□□□□□ -1.98
SDC3O75056 MYCBP2-AS2-201ENST00000428716 428 ntTSL 5 BASIC2.66□□□□□ -1.98
SDC3O75056 AL365184.2-201ENST00000431139 435 ntBASIC2.66□□□□□ -1.98
SDC3O75056 AL138830.1-201ENST00000435802 402 ntTSL 3 BASIC2.66□□□□□ -1.98
SDC3O75056 AL512286.1-201ENST00000439244 400 ntBASIC2.66□□□□□ -1.98
SDC3O75056 AC093579.1-201ENST00000439455 352 ntTSL 2 BASIC2.66□□□□□ -1.98
SDC3O75056 AC020550.1-201ENST00000447385 163 ntBASIC2.66□□□□□ -1.98
SDC3O75056 RPS15AP27-201ENST00000449183 343 ntBASIC2.66□□□□□ -1.98
SDC3O75056 LINC01474-202ENST00000449235 628 ntTSL 3 BASIC2.66□□□□□ -1.98
SDC3O75056 LINC01828-202ENST00000450294 955 ntTSL 5 BASIC2.66□□□□□ -1.98
SDC3O75056 AC010631.1-201ENST00000474150 156 ntBASIC2.66□□□□□ -1.98
SDC3O75056 RPL23AP11-201ENST00000475260 469 ntBASIC2.66□□□□□ -1.98
SDC3O75056 C4orf33-204ENST00000502887 1126 ntTSL 1 (best) BASIC2.66□□□□□ -1.98
SDC3O75056 AC025475.1-201ENST00000512939 487 ntTSL 3 BASIC2.66□□□□□ -1.98
SDC3O75056 AC093766.1-202ENST00000513400 718 ntTSL 3 BASIC2.66□□□□□ -1.98
SDC3O75056 AC010261.1-201ENST00000514411 457 ntTSL 5 BASIC2.66□□□□□ -1.98
SDC3O75056 RNA5SP148-201ENST00000516527 94 ntBASIC2.66□□□□□ -1.98
SDC3O75056 AC128657.1-201ENST00000549459 145 ntBASIC2.66□□□□□ -1.98
SDC3O75056 AL133368.2-201ENST00000556978 386 ntTSL 3 BASIC2.66□□□□□ -1.98
SDC3O75056 AC005498.1-201ENST00000592125 465 ntBASIC2.66□□□□□ -1.98
SDC3O75056 OR10AB1P-201ENST00000609613 938 ntBASIC2.66□□□□□ -1.98
SDC3O75056 SNHG22-203ENST00000617833 660 ntBASIC2.66□□□□□ -1.98
SDC3O75056 LINC01002-202ENST00000631412 459 ntTSL 5 BASIC2.66□□□□□ -1.98
SDC3O75056 MTND1P37-201ENST00000636562 264 ntBASIC2.66□□□□□ -1.98
SDC3O75056 ZNF519P1-201ENST00000449011 1626 ntBASIC2.66□□□□□ -1.98
SDC3O75056 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC2.66□□□□□ -1.98
SDC3O75056 AC026241.1-201ENST00000517873 2142 ntBASIC2.66□□□□□ -1.98
SDC3O75056 PKIB-201ENST00000258014 1595 ntTSL 2 BASIC2.66□□□□□ -1.98
SDC3O75056 OR4M1-202ENST00000641200 3493 ntAPPRIS P1 BASIC2.65□□□□□ -1.98
SDC3O75056 MIR181A2-201ENST00000384863 110 ntBASIC2.65□□□□□ -1.99
SDC3O75056 MIR181B1-201ENST00000385240 110 ntBASIC2.65□□□□□ -1.99
SDC3O75056 AL139039.1-201ENST00000401900 692 ntBASIC2.65□□□□□ -1.99
SDC3O75056 RPS20P2-201ENST00000402520 389 ntBASIC2.65□□□□□ -1.99
SDC3O75056 AL359634.1-202ENST00000404721 284 ntBASIC2.65□□□□□ -1.99
SDC3O75056 RNA5SP492-201ENST00000411330 114 ntBASIC2.65□□□□□ -1.99
SDC3O75056 AL160162.1-202ENST00000417654 244 ntTSL 3 BASIC2.65□□□□□ -1.99
SDC3O75056 LINC01065-201ENST00000417989 577 ntTSL 3 BASIC2.65□□□□□ -1.99
SDC3O75056 B3GALNT1P1-201ENST00000420569 975 ntBASIC2.65□□□□□ -1.99
SDC3O75056 Z99497.1-201ENST00000421282 135 ntBASIC2.65□□□□□ -1.99
SDC3O75056 AL365203.2-201ENST00000423444 196 ntBASIC2.65□□□□□ -1.99
SDC3O75056 AC114808.2-201ENST00000428335 536 ntTSL 4 BASIC2.65□□□□□ -1.99
SDC3O75056 AL360169.1-201ENST00000435116 143 ntTSL 5 BASIC2.65□□□□□ -1.99
SDC3O75056 AL513328.1-201ENST00000446460 224 ntBASIC2.65□□□□□ -1.99
SDC3O75056 WASF1P1-201ENST00000447560 1131 ntBASIC2.65□□□□□ -1.99
SDC3O75056 AC093110.1-201ENST00000456363 602 ntTSL 2 BASIC2.65□□□□□ -1.99
SDC3O75056 AC108059.3-201ENST00000456388 214 ntBASIC2.65□□□□□ -1.99
SDC3O75056 AL139824.2-201ENST00000458731 1095 ntBASIC2.65□□□□□ -1.99
SDC3O75056 GPX5-203ENST00000469384 428 ntTSL 1 (best) BASIC2.65□□□□□ -1.99
SDC3O75056 AC003982.1-202ENST00000469928 248 ntBASIC2.65□□□□□ -1.99
SDC3O75056 RPL31P41-201ENST00000477967 372 ntBASIC2.65□□□□□ -1.99
SDC3O75056 AC068587.2-201ENST00000478386 781 ntBASIC2.65□□□□□ -1.99
SDC3O75056 LINC02173-201ENST00000504132 521 ntTSL 2 BASIC2.65□□□□□ -1.99
SDC3O75056 AC117522.3-201ENST00000507974 584 ntBASIC2.65□□□□□ -1.99
SDC3O75056 EPGN-208ENST00000509145 222 ntTSL 1 (best) BASIC2.65□□□□□ -1.99
SDC3O75056 AC034223.1-201ENST00000511054 599 ntTSL 3 BASIC2.65□□□□□ -1.99
SDC3O75056 AC096725.1-201ENST00000514266 313 ntBASIC2.65□□□□□ -1.99
SDC3O75056 PCAT4-202ENST00000514836 373 ntTSL 3 BASIC2.65□□□□□ -1.99
SDC3O75056 ATP5F1P5-201ENST00000526403 760 ntBASIC2.65□□□□□ -1.99
SDC3O75056 DEFB108A-201ENST00000530110 222 ntBASIC2.65□□□□□ -1.99
SDC3O75056 AC123904.3-201ENST00000547218 814 ntBASIC2.65□□□□□ -1.99
SDC3O75056 AC063948.1-201ENST00000547360 379 ntTSL 5 BASIC2.65□□□□□ -1.99
SDC3O75056 AC093012.1-202ENST00000549403 582 ntBASIC2.65□□□□□ -1.99
SDC3O75056 AL358333.2-201ENST00000556834 529 ntTSL 5 BASIC2.65□□□□□ -1.99
SDC3O75056 AL158211.1-201ENST00000566763 763 ntBASIC2.65□□□□□ -1.99
SDC3O75056 AL356432.3-201ENST00000568952 465 ntBASIC2.65□□□□□ -1.99
SDC3O75056 AC010546.1-201ENST00000569391 485 ntBASIC2.65□□□□□ -1.99
SDC3O75056 GALNT1-205ENST00000591081 1120 ntTSL 1 (best) BASIC2.65□□□□□ -1.99
SDC3O75056 AC019159.1-201ENST00000605094 187 ntBASIC2.65□□□□□ -1.99
SDC3O75056 AC103710.1-201ENST00000610003 901 ntBASIC2.65□□□□□ -1.99
SDC3O75056 AC245517.5-201ENST00000611529 162 ntBASIC2.65□□□□□ -1.99
SDC3O75056 AL109811.3-202ENST00000612387 651 ntTSL 3 BASIC2.65□□□□□ -1.99
SDC3O75056 MIR6715A-201ENST00000615929 79 ntBASIC2.65□□□□□ -1.99
SDC3O75056 AL356266.1-201ENST00000623311 483 ntBASIC2.65□□□□□ -1.99
SDC3O75056 RBBP8-202ENST00000360790 2962 ntTSL 1 (best) BASIC2.64□□□□□ -1.99
SDC3O75056 MAP3K2-203ENST00000409947 10992 ntAPPRIS P1 TSL 1 (best) BASIC2.64□□□□□ -1.99
SDC3O75056 HSFY1-202ENST00000309834 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC2.64□□□□□ -1.99
SDC3O75056 HSFY2-202ENST00000344884 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC2.64□□□□□ -1.99
SDC3O75056 AL390198.1-201ENST00000376445 320 ntTSL 2 BASIC2.64□□□□□ -1.99
SDC3O75056 TRDJ1-201ENST00000390473 51 ntAPPRIS P1 BASIC2.64□□□□□ -1.99
SDC3O75056 SNORD115.1-201ENST00000391109 76 ntBASIC2.64□□□□□ -1.99
SDC3O75056 AL049545.1-201ENST00000401856 572 ntBASIC2.64□□□□□ -1.99
SDC3O75056 MIR1261-201ENST00000408659 82 ntBASIC2.64□□□□□ -1.99
SDC3O75056 RNU4-72P-201ENST00000410754 173 ntBASIC2.64□□□□□ -1.99
SDC3O75056 RPL17P12-201ENST00000413391 526 ntBASIC2.64□□□□□ -1.99
SDC3O75056 AC004543.1-201ENST00000418764 369 ntTSL 5 BASIC2.64□□□□□ -1.99
SDC3O75056 LINC01351-201ENST00000424735 526 ntTSL 2 BASIC2.64□□□□□ -1.99
SDC3O75056 AL353777.1-201ENST00000425552 326 ntBASIC2.64□□□□□ -1.99
SDC3O75056 AC092447.3-201ENST00000426027 686 ntBASIC2.64□□□□□ -1.99
SDC3O75056 LINC00392-201ENST00000430033 557 ntTSL 3 BASIC2.64□□□□□ -1.99
SDC3O75056 RPL7P34-201ENST00000433316 712 ntBASIC2.64□□□□□ -1.99
SDC3O75056 LINC01884-201ENST00000433429 440 ntTSL 3 BASIC2.64□□□□□ -1.99
SDC3O75056 AL513043.1-201ENST00000439124 535 ntBASIC2.64□□□□□ -1.99
SDC3O75056 RPL12P25-201ENST00000455592 494 ntBASIC2.64□□□□□ -1.99
SDC3O75056 RPS3P1-201ENST00000456781 192 ntBASIC2.64□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 164.9 ms