Protein–RNA interactions for Protein: O60609

GFRA3, GDNF family receptor alpha-3, humanhuman

Predictions only

Length 400 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA3O60609 COX6B1P5-201ENST00000509843 249 ntBASIC5.27□□□□□ -1.57
GFRA3O60609 RNA5SP116-201ENST00000516132 98 ntBASIC5.27□□□□□ -1.57
GFRA3O60609 FTH1P11-201ENST00000517577 551 ntBASIC5.27□□□□□ -1.57
GFRA3O60609 AC025647.1-201ENST00000517879 253 ntBASIC5.27□□□□□ -1.57
GFRA3O60609 CD84-208ENST00000534968 7885 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
GFRA3O60609 GNRHR2P1-201ENST00000555315 631 ntBASIC5.27□□□□□ -1.57
GFRA3O60609 ZNF192P1-203ENST00000565888 810 ntBASIC5.27□□□□□ -1.57
GFRA3O60609 AL034351.1-201ENST00000605288 668 ntBASIC5.27□□□□□ -1.57
GFRA3O60609 SNORD115-40-201ENST00000606510 82 ntBASIC5.27□□□□□ -1.57
GFRA3O60609 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC5.27□□□□□ -1.57
GFRA3O60609 AC093671.1-201ENST00000624981 2929 ntBASIC5.27□□□□□ -1.57
GFRA3O60609 U2SURP-214ENST00000493598 3491 ntTSL 5 BASIC5.27□□□□□ -1.57
GFRA3O60609 RNMT-202ENST00000383314 6250 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
GFRA3O60609 ZNF382-201ENST00000292928 8329 ntAPPRIS P3 TSL 1 (best) BASIC5.27□□□□□ -1.57
GFRA3O60609 AC092692.1-201ENST00000623625 2595 ntBASIC5.27□□□□□ -1.57
GFRA3O60609 SCN2A-202ENST00000375427 8553 ntAPPRIS ALT1 TSL 5 BASIC5.27□□□□□ -1.57
GFRA3O60609 ORMDL1-201ENST00000325795 2692 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
GFRA3O60609 ELMO1-203ENST00000396045 2524 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
GFRA3O60609 ZNF780A-204ENST00000455521 3600 ntAPPRIS ALT2 TSL 5 BASIC5.27□□□□□ -1.57
GFRA3O60609 ATPAF1-212ENST00000542495 1779 ntTSL 2 BASIC5.27□□□□□ -1.57
GFRA3O60609 SNX10-202ENST00000396376 2491 ntAPPRIS P2 TSL 1 (best) BASIC5.26□□□□□ -1.57
GFRA3O60609 ZNF214-204ENST00000536068 2562 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
GFRA3O60609 VCAN-203ENST00000343200 9455 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
GFRA3O60609 NSD1-201ENST00000347982 7688 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
GFRA3O60609 MRE11-204ENST00000407439 2684 ntTSL 2 BASIC5.26□□□□□ -1.57
GFRA3O60609 PTK2-212ENST00000519419 4439 ntTSL 5 BASIC5.26□□□□□ -1.57
GFRA3O60609 NBPF19-205ENST00000612881 3715 ntTSL 5 BASIC5.26□□□□□ -1.57
GFRA3O60609 HHLA1-201ENST00000414222 4105 ntAPPRIS ALT2 TSL 5 BASIC5.26□□□□□ -1.57
GFRA3O60609 ICE2-201ENST00000261520 7209 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
GFRA3O60609 FCER1G-201ENST00000289902 591 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
GFRA3O60609 SNORD8-201ENST00000363915 110 ntBASIC5.26□□□□□ -1.57
GFRA3O60609 Y_RNA.293-201ENST00000364908 93 ntBASIC5.26□□□□□ -1.57
GFRA3O60609 SNORA72.2-201ENST00000365028 127 ntBASIC5.26□□□□□ -1.57
GFRA3O60609 RNU6-969P-201ENST00000383900 105 ntBASIC5.26□□□□□ -1.57
GFRA3O60609 MIR298-201ENST00000401212 88 ntBASIC5.26□□□□□ -1.57
GFRA3O60609 RNU4-64P-201ENST00000410795 131 ntBASIC5.26□□□□□ -1.57
GFRA3O60609 AC008134.1-201ENST00000420943 193 ntBASIC5.26□□□□□ -1.57
GFRA3O60609 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC5.26□□□□□ -1.57
GFRA3O60609 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC5.26□□□□□ -1.57
GFRA3O60609 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC5.26□□□□□ -1.57
GFRA3O60609 RNA5SP464-201ENST00000516251 108 ntBASIC5.26□□□□□ -1.57
GFRA3O60609 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC5.26□□□□□ -1.57
GFRA3O60609 POLR3GP1-201ENST00000594073 261 ntBASIC5.26□□□□□ -1.57
GFRA3O60609 AC120024.3-201ENST00000603167 156 ntBASIC5.26□□□□□ -1.57
GFRA3O60609 MIR6716-201ENST00000613413 80 ntBASIC5.26□□□□□ -1.57
GFRA3O60609 MALAT1.1-201ENST00000618249 95 ntBASIC5.26□□□□□ -1.57
GFRA3O60609 MIR4496-201ENST00000635896 61 ntBASIC5.26□□□□□ -1.57
GFRA3O60609 AFM-201ENST00000226355 2059 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
GFRA3O60609 AC110373.1-201ENST00000505994 3505 ntBASIC5.26□□□□□ -1.57
GFRA3O60609 B3GNT5-201ENST00000326505 4123 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
GFRA3O60609 OR6Y1-202ENST00000641282 3702 ntAPPRIS P1 BASIC5.26□□□□□ -1.57
GFRA3O60609 ADH6-202ENST00000394897 3337 ntTSL 2 BASIC5.26□□□□□ -1.57
GFRA3O60609 ANKRD36C-201ENST00000295246 2272 ntTSL 5 BASIC5.26□□□□□ -1.57
GFRA3O60609 ZFX-202ENST00000338565 2906 ntTSL 5 BASIC5.26□□□□□ -1.57
GFRA3O60609 ALG10B-201ENST00000308742 10253 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
GFRA3O60609 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
GFRA3O60609 KIF27-202ENST00000334204 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC5.26□□□□□ -1.57
GFRA3O60609 SCAPER-207ENST00000563290 5028 ntAPPRIS P1 TSL 5 BASIC5.25□□□□□ -1.57
GFRA3O60609 AP1G1-207ENST00000564155 2723 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
GFRA3O60609 WASHC4-214ENST00000620430 5807 ntAPPRIS ALT1 TSL 1 (best) BASIC5.25□□□□□ -1.57
GFRA3O60609 ALG13-203ENST00000394780 4133 ntAPPRIS P1 TSL 2 BASIC5.25□□□□□ -1.57
GFRA3O60609 LINC02475-202ENST00000512678 2622 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
GFRA3O60609 ARHGAP24-201ENST00000264343 4572 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
GFRA3O60609 PFKFB2-201ENST00000367079 3494 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
GFRA3O60609 RNU1-130P-201ENST00000363930 160 ntBASIC5.25□□□□□ -1.57
GFRA3O60609 RNU6-1243P-201ENST00000364028 107 ntBASIC5.25□□□□□ -1.57
GFRA3O60609 RNU6-1134P-201ENST00000365156 101 ntBASIC5.25□□□□□ -1.57
GFRA3O60609 RNU6-1293P-201ENST00000384077 107 ntBASIC5.25□□□□□ -1.57
GFRA3O60609 AL606845.1-201ENST00000404881 255 ntBASIC5.25□□□□□ -1.57
GFRA3O60609 RNA5SP251-201ENST00000410614 137 ntBASIC5.25□□□□□ -1.57
GFRA3O60609 LINC00279-201ENST00000413486 473 ntTSL 3 BASIC5.25□□□□□ -1.57
GFRA3O60609 RPS27AP12-201ENST00000429552 465 ntBASIC5.25□□□□□ -1.57
GFRA3O60609 AC002465.1-201ENST00000436097 349 ntTSL 2 BASIC5.25□□□□□ -1.57
GFRA3O60609 AL135790.2-201ENST00000437701 267 ntBASIC5.25□□□□□ -1.57
GFRA3O60609 AL353705.4-201ENST00000449661 238 ntBASIC5.25□□□□□ -1.57
GFRA3O60609 NIP7P2-201ENST00000485801 544 ntBASIC5.25□□□□□ -1.57
GFRA3O60609 AF186996.7-201ENST00000492781 209 ntBASIC5.25□□□□□ -1.57
GFRA3O60609 MRPS36P2-201ENST00000512569 299 ntBASIC5.25□□□□□ -1.57
GFRA3O60609 RNU6-155P-201ENST00000516347 100 ntBASIC5.25□□□□□ -1.57
GFRA3O60609 RNA5SP281-201ENST00000516504 135 ntBASIC5.25□□□□□ -1.57
GFRA3O60609 AC110288.1-201ENST00000517950 446 ntTSL 3 BASIC5.25□□□□□ -1.57
GFRA3O60609 SNHG1-210ENST00000539303 240 ntTSL 3 BASIC5.25□□□□□ -1.57
GFRA3O60609 MIR4298-201ENST00000584380 73 ntBASIC5.25□□□□□ -1.57
GFRA3O60609 RNU6-156P-201ENST00000621869 107 ntBASIC5.25□□□□□ -1.57
GFRA3O60609 C2orf83-206ENST00000642055 453 ntAPPRIS P3 BASIC5.25□□□□□ -1.57
GFRA3O60609 F13B-201ENST00000367412 2217 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
GFRA3O60609 ASXL2-203ENST00000435504 12878 ntAPPRIS P5 TSL 5 BASIC5.25□□□□□ -1.57
GFRA3O60609 PROS2P-201ENST00000474651 1951 ntBASIC5.25□□□□□ -1.57
GFRA3O60609 LINC02388-201ENST00000550678 1975 ntTSL 2 BASIC5.25□□□□□ -1.57
GFRA3O60609 EDIL3-202ENST00000380138 4244 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
GFRA3O60609 ESRRG-205ENST00000366937 5365 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
GFRA3O60609 TEX9-203ENST00000558083 4440 ntTSL 2 BASIC5.25□□□□□ -1.57
GFRA3O60609 PCDH18-202ENST00000412923 5102 ntAPPRIS ALT1 TSL 1 (best) BASIC5.25□□□□□ -1.57
GFRA3O60609 AC139713.2-214ENST00000642059 1811 ntBASIC5.25□□□□□ -1.57
GFRA3O60609 ZNF184-202ENST00000377419 2899 ntAPPRIS P1 TSL 4 BASIC5.25□□□□□ -1.57
GFRA3O60609 IL1RAPL1-202ENST00000378993 3667 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
GFRA3O60609 GPR1-201ENST00000407325 2295 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
GFRA3O60609 IL1RL1-202ENST00000311734 3994 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
GFRA3O60609 SEMA6D-210ENST00000558816 4419 ntTSL 5 BASIC5.24□□□□□ -1.57
GFRA3O60609 PRKDC-201ENST00000314191 13509 ntAPPRIS P4 TSL 1 (best) BASIC5.24□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 137.3 ms