Protein–RNA interactions for Protein: O60232

SSSCA1, Sjoegren syndrome/scleroderma autoantigen 1, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1O60232 AP001269.3-201ENST00000588718 329 ntBASIC0.95□□□□□ -2.26
SSSCA1O60232 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC0.95□□□□□ -2.26
SSSCA1O60232 AP003973.1-201ENST00000604639 691 ntBASIC0.95□□□□□ -2.26
SSSCA1O60232 AL138963.2-201ENST00000605137 226 ntBASIC0.95□□□□□ -2.26
SSSCA1O60232 AC242426.3-203ENST00000606757 712 ntTSL 3 BASIC0.95□□□□□ -2.26
SSSCA1O60232 MIR6130-201ENST00000619419 109 ntBASIC0.95□□□□□ -2.26
SSSCA1O60232 AP003476.1-201ENST00000623984 516 ntBASIC0.95□□□□□ -2.26
SSSCA1O60232 AC097655.1-201ENST00000635075 318 ntBASIC0.95□□□□□ -2.26
SSSCA1O60232 ATXN3L-201ENST00000380622 2164 ntAPPRIS P1 BASIC0.94□□□□□ -2.26
SSSCA1O60232 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC0.94□□□□□ -2.26
SSSCA1O60232 MIR424-201ENST00000362227 98 ntBASIC0.94□□□□□ -2.26
SSSCA1O60232 SNORD26-201ENST00000384147 75 ntBASIC0.94□□□□□ -2.26
SSSCA1O60232 U6atac.2-201ENST00000408644 118 ntBASIC0.94□□□□□ -2.26
SSSCA1O60232 BX276092.3-201ENST00000424182 230 ntBASIC0.94□□□□□ -2.26
SSSCA1O60232 AL589935.1-209ENST00000432050 418 ntTSL 5 BASIC0.94□□□□□ -2.26
SSSCA1O60232 AC091153.2-202ENST00000441700 384 ntTSL 3 BASIC0.94□□□□□ -2.26
SSSCA1O60232 AC009238.1-201ENST00000442165 424 ntBASIC0.94□□□□□ -2.26
SSSCA1O60232 AC009237.6-201ENST00000446969 424 ntBASIC0.94□□□□□ -2.26
SSSCA1O60232 HMGN2P23-201ENST00000456759 269 ntBASIC0.94□□□□□ -2.26
SSSCA1O60232 LARP1BP2-201ENST00000486594 519 ntBASIC0.94□□□□□ -2.26
SSSCA1O60232 OR5AK1P-201ENST00000524837 922 ntBASIC0.94□□□□□ -2.26
SSSCA1O60232 HTN3-202ENST00000526767 578 ntAPPRIS P2 TSL 1 (best) BASIC0.94□□□□□ -2.26
SSSCA1O60232 AP003110.1-201ENST00000526976 717 ntTSL 1 (best) BASIC0.94□□□□□ -2.26
SSSCA1O60232 IMMP1LP2-201ENST00000552954 492 ntBASIC0.94□□□□□ -2.26
SSSCA1O60232 AC090971.2-201ENST00000558142 510 ntTSL 3 BASIC0.94□□□□□ -2.26
SSSCA1O60232 AC021851.1-201ENST00000608537 1082 ntBASIC0.94□□□□□ -2.26
SSSCA1O60232 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC0.94□□□□□ -2.26
SSSCA1O60232 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC0.94□□□□□ -2.26
SSSCA1O60232 GMFB-210ENST00000628554 639 ntTSL 4 BASIC0.94□□□□□ -2.26
SSSCA1O60232 ZNF639-206ENST00000484866 1730 ntAPPRIS P1 TSL 2 BASIC0.94□□□□□ -2.26
SSSCA1O60232 PAPPA-AS1-201ENST00000445861 2450 ntBASIC0.94□□□□□ -2.26
SSSCA1O60232 MTND5P31-201ENST00000419366 1374 ntBASIC0.94□□□□□ -2.26
SSSCA1O60232 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC0.93□□□□□ -2.26
SSSCA1O60232 AC007785.2-201ENST00000598627 1916 ntBASIC0.93□□□□□ -2.26
SSSCA1O60232 RNU6-939P-201ENST00000384634 107 ntBASIC0.93□□□□□ -2.26
SSSCA1O60232 SNORA67.5-201ENST00000391036 107 ntBASIC0.93□□□□□ -2.26
SSSCA1O60232 MEIG1-202ENST00000407572 625 ntAPPRIS P1 TSL 2 BASIC0.93□□□□□ -2.26
SSSCA1O60232 NDUFB4P7-201ENST00000423198 363 ntBASIC0.93□□□□□ -2.26
SSSCA1O60232 AC114808.2-201ENST00000428335 536 ntTSL 4 BASIC0.93□□□□□ -2.26
SSSCA1O60232 TOMM22P2-201ENST00000430735 237 ntBASIC0.93□□□□□ -2.26
SSSCA1O60232 AL606534.3-201ENST00000437499 373 ntTSL 5 BASIC0.93□□□□□ -2.26
SSSCA1O60232 AC068135.1-201ENST00000446164 246 ntBASIC0.93□□□□□ -2.26
SSSCA1O60232 ITGA9-AS1-208ENST00000449586 726 ntTSL 3 BASIC0.93□□□□□ -2.26
SSSCA1O60232 AL137001.1-201ENST00000450212 199 ntTSL 3 BASIC0.93□□□□□ -2.26
SSSCA1O60232 LINC02447-203ENST00000504402 292 ntTSL 3 BASIC0.93□□□□□ -2.26
SSSCA1O60232 AC008837.1-201ENST00000511513 412 ntBASIC0.93□□□□□ -2.26
SSSCA1O60232 SNORA4.4-201ENST00000515921 135 ntBASIC0.93□□□□□ -2.26
SSSCA1O60232 SNORA44.1-201ENST00000517031 108 ntBASIC0.93□□□□□ -2.26
SSSCA1O60232 AC004943.1-202ENST00000558618 503 ntTSL 3 BASIC0.93□□□□□ -2.26
SSSCA1O60232 TTN-AS1-213ENST00000584485 838 ntTSL 3 BASIC0.93□□□□□ -2.26
SSSCA1O60232 MIR3660-201ENST00000584845 100 ntBASIC0.93□□□□□ -2.26
SSSCA1O60232 AC120349.1-201ENST00000599498 282 ntTSL 5 BASIC0.93□□□□□ -2.26
SSSCA1O60232 BX546450.2-201ENST00000602419 435 ntTSL 5 BASIC0.93□□□□□ -2.26
SSSCA1O60232 RNF219-AS1-205ENST00000605996 792 ntTSL 5 BASIC0.93□□□□□ -2.26
SSSCA1O60232 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC0.93□□□□□ -2.26
SSSCA1O60232 AL138478.1-201ENST00000612252 832 ntBASIC0.93□□□□□ -2.26
SSSCA1O60232 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC0.93□□□□□ -2.26
SSSCA1O60232 AC009318.4-201ENST00000620496 486 ntBASIC0.93□□□□□ -2.26
SSSCA1O60232 AC024595.1-201ENST00000623088 387 ntBASIC0.93□□□□□ -2.26
SSSCA1O60232 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC0.92□□□□□ -2.26
SSSCA1O60232 AC002543.1-201ENST00000299783 1954 ntBASIC0.92□□□□□ -2.26
SSSCA1O60232 AC005832.2-201ENST00000538921 1430 ntBASIC0.92□□□□□ -2.26
SSSCA1O60232 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC0.92□□□□□ -2.26
SSSCA1O60232 RNU4-91P-201ENST00000364778 135 ntBASIC0.92□□□□□ -2.26
SSSCA1O60232 MIR634-201ENST00000385208 97 ntBASIC0.92□□□□□ -2.26
SSSCA1O60232 NDUFS5P1-201ENST00000405668 289 ntBASIC0.92□□□□□ -2.26
SSSCA1O60232 AC079150.1-201ENST00000413043 383 ntTSL 3 BASIC0.92□□□□□ -2.26
SSSCA1O60232 TEX41-202ENST00000414256 604 ntTSL 5 BASIC0.92□□□□□ -2.26
SSSCA1O60232 OR6C66P-201ENST00000414917 930 ntBASIC0.92□□□□□ -2.26
SSSCA1O60232 AC096649.2-201ENST00000416186 393 ntBASIC0.92□□□□□ -2.26
SSSCA1O60232 RPP40P1-201ENST00000426762 456 ntBASIC0.92□□□□□ -2.26
SSSCA1O60232 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC0.92□□□□□ -2.26
SSSCA1O60232 HMGB3P12-201ENST00000438745 556 ntBASIC0.92□□□□□ -2.26
SSSCA1O60232 AP1S2P1-201ENST00000457344 379 ntBASIC0.92□□□□□ -2.26
SSSCA1O60232 RNA5SP57-201ENST00000459463 123 ntBASIC0.92□□□□□ -2.26
SSSCA1O60232 LINC02144-201ENST00000511417 592 ntTSL 4 BASIC0.92□□□□□ -2.26
SSSCA1O60232 RNU5A-7P-201ENST00000515979 116 ntBASIC0.92□□□□□ -2.26
SSSCA1O60232 AC107882.1-201ENST00000530837 477 ntTSL 3 BASIC0.92□□□□□ -2.26
SSSCA1O60232 AL442163.1-201ENST00000557251 515 ntTSL 5 BASIC0.92□□□□□ -2.26
SSSCA1O60232 AC080013.4-201ENST00000607624 649 ntBASIC0.92□□□□□ -2.26
SSSCA1O60232 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC0.92□□□□□ -2.26
SSSCA1O60232 AC010889.1-201ENST00000566193 2666 ntBASIC0.92□□□□□ -2.26
SSSCA1O60232 NF1-214ENST00000490416 1329 ntTSL 3 BASIC0.91□□□□□ -2.26
SSSCA1O60232 AP000776.1-201ENST00000530032 1663 ntBASIC0.91□□□□□ -2.26
SSSCA1O60232 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC0.91□□□□□ -2.26
SSSCA1O60232 MIR421-201ENST00000365696 85 ntBASIC0.91□□□□□ -2.26
SSSCA1O60232 OR51A4-201ENST00000380373 1002 ntAPPRIS P1 BASIC0.91□□□□□ -2.26
SSSCA1O60232 MIR30A-201ENST00000385092 71 ntBASIC0.91□□□□□ -2.26
SSSCA1O60232 MIR513A1-201ENST00000385138 129 ntBASIC0.91□□□□□ -2.26
SSSCA1O60232 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC0.91□□□□□ -2.26
SSSCA1O60232 MRPL35P3-201ENST00000421557 364 ntBASIC0.91□□□□□ -2.26
SSSCA1O60232 AC007742.1-201ENST00000425789 329 ntBASIC0.91□□□□□ -2.26
SSSCA1O60232 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC0.91□□□□□ -2.26
SSSCA1O60232 ELOCP26-201ENST00000436067 329 ntBASIC0.91□□□□□ -2.26
SSSCA1O60232 AC241584.1-201ENST00000438469 1241 ntBASIC0.91□□□□□ -2.26
SSSCA1O60232 AC004485.1-201ENST00000439839 527 ntTSL 5 BASIC0.91□□□□□ -2.26
SSSCA1O60232 AL139230.1-201ENST00000440094 425 ntTSL 3 BASIC0.91□□□□□ -2.26
SSSCA1O60232 RPL26P6-201ENST00000440913 438 ntBASIC0.91□□□□□ -2.26
SSSCA1O60232 AC006042.4-201ENST00000451066 692 ntTSL 5 BASIC0.91□□□□□ -2.26
SSSCA1O60232 PLCB1-IT1-202ENST00000451443 251 ntTSL 3 BASIC0.91□□□□□ -2.26
Retrieved 100 of 98,524 protein–RNA pairs in 110.6 ms