Protein–RNA interactions for Protein: O43805

SSNA1, Sjoegren syndrome nuclear autoantigen 1, humanhuman

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSNA1O43805 AL121904.1-201ENST00000611894 948 ntTSL 5 BASIC1.61□□□□□ -2.15
SSNA1O43805 AL357080.1-201ENST00000617394 239 ntBASIC1.61□□□□□ -2.15
SSNA1O43805 CDR1-202ENST00000625883 1485 ntBASIC1.61□□□□□ -2.15
SSNA1O43805 AL390862.1-201ENST00000635467 1469 ntBASIC1.61□□□□□ -2.15
SSNA1O43805 MTND5P29-201ENST00000458676 1807 ntBASIC1.61□□□□□ -2.15
SSNA1O43805 AC008555.8-201ENST00000623602 2168 ntBASIC1.61□□□□□ -2.15
SSNA1O43805 Z75746.1-201ENST00000440243 2080 ntBASIC1.6□□□□□ -2.15
SSNA1O43805 MIR34B-201ENST00000385076 84 ntBASIC1.6□□□□□ -2.15
SSNA1O43805 AL590084.2-201ENST00000401481 382 ntBASIC1.6□□□□□ -2.15
SSNA1O43805 NDUFS5P1-201ENST00000405668 289 ntBASIC1.6□□□□□ -2.15
SSNA1O43805 RNU2-20P-201ENST00000410425 191 ntBASIC1.6□□□□□ -2.15
SSNA1O43805 RNU2-68P-201ENST00000410878 191 ntBASIC1.6□□□□□ -2.15
SSNA1O43805 LINC01646-201ENST00000420522 682 ntTSL 3 BASIC1.6□□□□□ -2.15
SSNA1O43805 RPL7P12-201ENST00000446719 750 ntBASIC1.6□□□□□ -2.15
SSNA1O43805 TPT1P14-201ENST00000448018 505 ntBASIC1.6□□□□□ -2.15
SSNA1O43805 AC016903.2-201ENST00000456384 326 ntTSL 3 BASIC1.6□□□□□ -2.15
SSNA1O43805 AC013267.1-201ENST00000458227 267 ntBASIC1.6□□□□□ -2.15
SSNA1O43805 NCOR1P1-201ENST00000478176 406 ntTSL 1 (best) BASIC1.6□□□□□ -2.15
SSNA1O43805 AC021382.1-201ENST00000483523 359 ntBASIC1.6□□□□□ -2.15
SSNA1O43805 HMGB1P28-201ENST00000507778 552 ntBASIC1.6□□□□□ -2.15
SSNA1O43805 AC011377.1-201ENST00000517708 275 ntTSL 3 BASIC1.6□□□□□ -2.15
SSNA1O43805 NRG1-IT1-202ENST00000521463 742 ntTSL 1 (best) BASIC1.6□□□□□ -2.15
SSNA1O43805 MTCO3P15-201ENST00000526563 574 ntBASIC1.6□□□□□ -2.15
SSNA1O43805 CACNA1C-AS4-201ENST00000544415 735 ntTSL 3 BASIC1.6□□□□□ -2.15
SSNA1O43805 AC090079.2-201ENST00000575289 768 ntBASIC1.6□□□□□ -2.15
SSNA1O43805 AC016382.1-201ENST00000583580 387 ntTSL 3 BASIC1.6□□□□□ -2.15
SSNA1O43805 LINC02210-208ENST00000585118 546 ntTSL 1 (best) BASIC1.6□□□□□ -2.15
SSNA1O43805 AC097467.3-205ENST00000597955 594 ntTSL 5 BASIC1.6□□□□□ -2.15
SSNA1O43805 AC073544.2-201ENST00000601155 540 ntBASIC1.6□□□□□ -2.15
SSNA1O43805 AP005229.2-201ENST00000609980 697 ntBASIC1.6□□□□□ -2.15
SSNA1O43805 Y_RNA.783-201ENST00000613546 102 ntBASIC1.6□□□□□ -2.15
SSNA1O43805 AC010378.1-201ENST00000619270 362 ntBASIC1.6□□□□□ -2.15
SSNA1O43805 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC1.6□□□□□ -2.15
SSNA1O43805 AC009487.4-201ENST00000624969 3585 ntBASIC1.59□□□□□ -2.15
SSNA1O43805 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC1.59□□□□□ -2.15
SSNA1O43805 RNA5SP363-201ENST00000365072 115 ntBASIC1.59□□□□□ -2.15
SSNA1O43805 RNU6-468P-201ENST00000384003 109 ntBASIC1.59□□□□□ -2.15
SSNA1O43805 RNU6-658P-201ENST00000384606 106 ntBASIC1.59□□□□□ -2.15
SSNA1O43805 AL139156.1-201ENST00000412785 841 ntBASIC1.59□□□□□ -2.15
SSNA1O43805 BTF3P8-201ENST00000414577 526 ntBASIC1.59□□□□□ -2.15
SSNA1O43805 AC020571.1-201ENST00000430904 768 ntTSL 2 BASIC1.59□□□□□ -2.15
SSNA1O43805 AC078845.1-202ENST00000435996 733 ntTSL 3 BASIC1.59□□□□□ -2.15
SSNA1O43805 MTND6P13-201ENST00000443510 523 ntBASIC1.59□□□□□ -2.15
SSNA1O43805 RPL23AP6-201ENST00000446637 472 ntBASIC1.59□□□□□ -2.15
SSNA1O43805 ARPC3P5-201ENST00000448802 534 ntBASIC1.59□□□□□ -2.15
SSNA1O43805 AC234781.5-202ENST00000453508 426 ntTSL 3 BASIC1.59□□□□□ -2.15
SSNA1O43805 RPL31P50-201ENST00000471002 296 ntBASIC1.59□□□□□ -2.15
SSNA1O43805 MAGI1-AS1-201ENST00000472514 591 ntTSL 3 BASIC1.59□□□□□ -2.15
SSNA1O43805 BZW1P2-201ENST00000473537 826 ntBASIC1.59□□□□□ -2.15
SSNA1O43805 CKS1BP2-201ENST00000497342 240 ntBASIC1.59□□□□□ -2.15
SSNA1O43805 AC026719.1-201ENST00000506059 456 ntTSL 3 BASIC1.59□□□□□ -2.15
SSNA1O43805 SMAD1-AS2-201ENST00000508936 1090 ntTSL 1 (best) BASIC1.59□□□□□ -2.15
SSNA1O43805 MTND5P13-201ENST00000513046 1079 ntBASIC1.59□□□□□ -2.15
SSNA1O43805 RNU6-927P-201ENST00000516199 100 ntBASIC1.59□□□□□ -2.15
SSNA1O43805 AC113192.3-201ENST00000529152 742 ntBASIC1.59□□□□□ -2.15
SSNA1O43805 MEG8-218ENST00000556720 456 ntTSL 3 BASIC1.59□□□□□ -2.15
SSNA1O43805 MMP2-AS1-201ENST00000565307 593 ntTSL 4 BASIC1.59□□□□□ -2.15
SSNA1O43805 MIR3618-201ENST00000580330 88 ntBASIC1.59□□□□□ -2.15
SSNA1O43805 AL078605.1-201ENST00000603529 500 ntBASIC1.59□□□□□ -2.15
SSNA1O43805 AC009974.1-201ENST00000608881 455 ntBASIC1.59□□□□□ -2.15
SSNA1O43805 AL109811.3-202ENST00000612387 651 ntTSL 3 BASIC1.59□□□□□ -2.15
SSNA1O43805 AC011939.3-201ENST00000613686 466 ntBASIC1.59□□□□□ -2.15
SSNA1O43805 AC020658.4-201ENST00000613987 684 ntBASIC1.59□□□□□ -2.15
SSNA1O43805 AL773524.1-201ENST00000614065 229 ntBASIC1.59□□□□□ -2.15
SSNA1O43805 MIR5739-201ENST00000619803 80 ntBASIC1.59□□□□□ -2.15
SSNA1O43805 AC023490.3-201ENST00000621762 358 ntTSL 3 BASIC1.59□□□□□ -2.15
SSNA1O43805 AL118508.4-201ENST00000624142 1176 ntBASIC1.59□□□□□ -2.15
SSNA1O43805 AP000550.4-201ENST00000639507 358 ntTSL 3 BASIC1.59□□□□□ -2.15
SSNA1O43805 PRB2-201ENST00000389362 1429 ntAPPRIS P2 TSL 5 BASIC1.58□□□□□ -2.16
SSNA1O43805 KLRC2-202ENST00000381902 1221 ntAPPRIS P2 TSL 1 (best) BASIC1.58□□□□□ -2.16
SSNA1O43805 UBE2FP1-201ENST00000416536 447 ntBASIC1.58□□□□□ -2.16
SSNA1O43805 AL158823.1-201ENST00000418441 478 ntBASIC1.58□□□□□ -2.16
SSNA1O43805 AL162254.1-202ENST00000419604 497 ntTSL 5 BASIC1.58□□□□□ -2.16
SSNA1O43805 AL160275.3-201ENST00000423876 471 ntBASIC1.58□□□□□ -2.16
SSNA1O43805 AC113331.1-201ENST00000428160 869 ntTSL 2 BASIC1.58□□□□□ -2.16
SSNA1O43805 MTATP6P30-201ENST00000443540 664 ntBASIC1.58□□□□□ -2.16
SSNA1O43805 AL096829.2-201ENST00000446582 742 ntBASIC1.58□□□□□ -2.16
SSNA1O43805 AC104978.1-201ENST00000449387 391 ntBASIC1.58□□□□□ -2.16
SSNA1O43805 S100A11P2-201ENST00000467589 312 ntBASIC1.58□□□□□ -2.16
SSNA1O43805 GPX5-203ENST00000469384 428 ntTSL 1 (best) BASIC1.58□□□□□ -2.16
SSNA1O43805 RPL7P18-201ENST00000478965 734 ntBASIC1.58□□□□□ -2.16
SSNA1O43805 LINC01995-201ENST00000489016 621 ntTSL 3 BASIC1.58□□□□□ -2.16
SSNA1O43805 MTAPP1-201ENST00000489154 819 ntBASIC1.58□□□□□ -2.16
SSNA1O43805 AC080014.1-201ENST00000496877 1201 ntBASIC1.58□□□□□ -2.16
SSNA1O43805 AC139720.2-201ENST00000514766 440 ntTSL 2 BASIC1.58□□□□□ -2.16
SSNA1O43805 AC009435.1-201ENST00000519555 574 ntTSL 4 BASIC1.58□□□□□ -2.16
SSNA1O43805 IGKV3-31-201ENST00000523109 329 ntBASIC1.58□□□□□ -2.16
SSNA1O43805 AC103798.1-201ENST00000532562 376 ntTSL 2 BASIC1.58□□□□□ -2.16
SSNA1O43805 OR6C7P-201ENST00000547875 934 ntBASIC1.58□□□□□ -2.16
SSNA1O43805 G2E3-AS1-202ENST00000550118 609 ntTSL 5 BASIC1.58□□□□□ -2.16
SSNA1O43805 GTF3AP2-201ENST00000557014 266 ntBASIC1.58□□□□□ -2.16
SSNA1O43805 LINC01735-201ENST00000568112 279 ntTSL 3 BASIC1.58□□□□□ -2.16
SSNA1O43805 MIR4419B-201ENST00000577260 68 ntBASIC1.58□□□□□ -2.16
SSNA1O43805 MIR5708-201ENST00000579723 85 ntBASIC1.58□□□□□ -2.16
SSNA1O43805 AC019183.1-201ENST00000580524 505 ntTSL 3 BASIC1.58□□□□□ -2.16
SSNA1O43805 AC008739.3-201ENST00000603262 127 ntBASIC1.58□□□□□ -2.16
SSNA1O43805 AF129408.1-201ENST00000608767 431 ntBASIC1.58□□□□□ -2.16
SSNA1O43805 DUSP12P1-201ENST00000612874 516 ntBASIC1.58□□□□□ -2.16
SSNA1O43805 AC073052.2-202ENST00000622296 775 ntTSL 5 BASIC1.58□□□□□ -2.16
SSNA1O43805 Z99571.1-201ENST00000636677 394 ntBASIC1.58□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 102.8 ms