Protein–RNA interactions for Protein: O43583

DENR, Density-regulated protein, humanhuman

Known RBP Predictions only

Length 198 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DENRO43583 AC025917.1-201ENST00000562062 612 ntTSL 3 BASIC1.78□□□□□ -2.12
DENRO43583 AC010547.2-201ENST00000568523 409 ntTSL 5 BASIC1.78□□□□□ -2.12
DENRO43583 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC1.78□□□□□ -2.12
DENRO43583 AL390838.2-201ENST00000602394 274 ntBASIC1.78□□□□□ -2.12
DENRO43583 AF131215.7-201ENST00000602443 707 ntBASIC1.78□□□□□ -2.12
DENRO43583 AC008759.3-201ENST00000613300 508 ntBASIC1.78□□□□□ -2.12
DENRO43583 AL512427.1-201ENST00000618593 349 ntBASIC1.78□□□□□ -2.12
DENRO43583 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC1.78□□□□□ -2.13
DENRO43583 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC1.78□□□□□ -2.13
DENRO43583 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC1.77□□□□□ -2.13
DENRO43583 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC1.77□□□□□ -2.13
DENRO43583 C2orf73-208ENST00000615983 1376 ntTSL 1 (best) BASIC1.77□□□□□ -2.13
DENRO43583 AC008555.8-201ENST00000623602 2168 ntBASIC1.77□□□□□ -2.13
DENRO43583 RNU6-1078P-201ENST00000364522 103 ntBASIC1.77□□□□□ -2.13
DENRO43583 SNORA23-201ENST00000365128 182 ntBASIC1.77□□□□□ -2.13
DENRO43583 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC1.77□□□□□ -2.13
DENRO43583 RNU6-952P-201ENST00000391164 108 ntBASIC1.77□□□□□ -2.13
DENRO43583 RPL23AP29-201ENST00000397284 453 ntBASIC1.77□□□□□ -2.13
DENRO43583 AL356432.1-201ENST00000405809 419 ntBASIC1.77□□□□□ -2.13
DENRO43583 AC068533.2-201ENST00000411872 306 ntBASIC1.77□□□□□ -2.13
DENRO43583 AL161909.2-201ENST00000417577 409 ntTSL 5 BASIC1.77□□□□□ -2.13
DENRO43583 LINC02331-201ENST00000418927 602 ntTSL 5 BASIC1.77□□□□□ -2.13
DENRO43583 AC007435.1-201ENST00000421086 415 ntBASIC1.77□□□□□ -2.13
DENRO43583 MRPS36P1-201ENST00000421291 307 ntBASIC1.77□□□□□ -2.13
DENRO43583 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC1.77□□□□□ -2.13
DENRO43583 AC013262.1-201ENST00000426710 252 ntBASIC1.77□□□□□ -2.13
DENRO43583 ZNF863P-201ENST00000426746 417 ntBASIC1.77□□□□□ -2.13
DENRO43583 AL080284.1-201ENST00000434493 442 ntTSL 2 BASIC1.77□□□□□ -2.13
DENRO43583 GTF2IP7-202ENST00000436677 309 ntBASIC1.77□□□□□ -2.13
DENRO43583 KRTAP19-11P-201ENST00000439851 104 ntBASIC1.77□□□□□ -2.13
DENRO43583 SPANXN4-202ENST00000446864 431 ntAPPRIS P2 TSL 1 (best) BASIC1.77□□□□□ -2.13
DENRO43583 RNU7-136P-201ENST00000458819 69 ntBASIC1.77□□□□□ -2.13
DENRO43583 RPS20P20-201ENST00000460498 340 ntBASIC1.77□□□□□ -2.13
DENRO43583 C1orf185-202ENST00000467127 747 ntAPPRIS ALT2 TSL 3 BASIC1.77□□□□□ -2.13
DENRO43583 MTAPP1-201ENST00000489154 819 ntBASIC1.77□□□□□ -2.13
DENRO43583 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC1.77□□□□□ -2.13
DENRO43583 AC104137.1-201ENST00000503625 385 ntTSL 3 BASIC1.77□□□□□ -2.13
DENRO43583 AC098799.1-201ENST00000504752 800 ntBASIC1.77□□□□□ -2.13
DENRO43583 AC110296.1-201ENST00000515680 341 ntTSL 3 BASIC1.77□□□□□ -2.13
DENRO43583 RNU6-714P-201ENST00000516963 103 ntBASIC1.77□□□□□ -2.13
DENRO43583 AC108449.1-202ENST00000517632 478 ntTSL 3 BASIC1.77□□□□□ -2.13
DENRO43583 DEUP1-203ENST00000527307 767 ntTSL 3 BASIC1.77□□□□□ -2.13
DENRO43583 HOMER1-205ENST00000535690 642 ntTSL 1 (best) BASIC1.77□□□□□ -2.13
DENRO43583 ZKSCAN7P1-201ENST00000543668 673 ntBASIC1.77□□□□□ -2.13
DENRO43583 SNRPGP18-201ENST00000553000 214 ntBASIC1.77□□□□□ -2.13
DENRO43583 AL136520.1-202ENST00000555494 763 ntBASIC1.77□□□□□ -2.13
DENRO43583 MIR3912-201ENST00000577566 105 ntBASIC1.77□□□□□ -2.13
DENRO43583 AC002545.1-201ENST00000592511 181 ntBASIC1.77□□□□□ -2.13
DENRO43583 AC007938.3-201ENST00000604965 623 ntBASIC1.77□□□□□ -2.13
DENRO43583 AC024257.5-201ENST00000612739 531 ntBASIC1.77□□□□□ -2.13
DENRO43583 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC1.77□□□□□ -2.13
DENRO43583 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC1.77□□□□□ -2.13
DENRO43583 ZCCHC10-201ENST00000324170 2178 ntAPPRIS P3 TSL 1 (best) BASIC1.76□□□□□ -2.13
DENRO43583 ATXN3L-201ENST00000380622 2164 ntAPPRIS P1 BASIC1.76□□□□□ -2.13
DENRO43583 RNU6-1159P-201ENST00000362933 107 ntBASIC1.76□□□□□ -2.13
DENRO43583 SNORA11.4-201ENST00000408823 129 ntBASIC1.76□□□□□ -2.13
DENRO43583 AC003001.1-201ENST00000443247 1135 ntTSL 5 BASIC1.76□□□□□ -2.13
DENRO43583 HMGN1P5-201ENST00000448591 263 ntBASIC1.76□□□□□ -2.13
DENRO43583 RPL26P9-201ENST00000457466 433 ntBASIC1.76□□□□□ -2.13
DENRO43583 AC046136.1-201ENST00000459855 533 ntTSL 3 BASIC1.76□□□□□ -2.13
DENRO43583 AC126389.1-201ENST00000477436 290 ntBASIC1.76□□□□□ -2.13
DENRO43583 AC069306.1-201ENST00000507006 843 ntBASIC1.76□□□□□ -2.13
DENRO43583 MTCYBP16-201ENST00000509187 1129 ntBASIC1.76□□□□□ -2.13
DENRO43583 LINC02484-201ENST00000513843 546 ntTSL 5 BASIC1.76□□□□□ -2.13
DENRO43583 AC011377.1-201ENST00000517708 275 ntTSL 3 BASIC1.76□□□□□ -2.13
DENRO43583 NRG1-IT1-202ENST00000521463 742 ntTSL 1 (best) BASIC1.76□□□□□ -2.13
DENRO43583 AP001646.1-201ENST00000527936 915 ntBASIC1.76□□□□□ -2.13
DENRO43583 DEFB130C-202ENST00000530001 230 ntBASIC1.76□□□□□ -2.13
DENRO43583 AP003168.1-201ENST00000530091 307 ntBASIC1.76□□□□□ -2.13
DENRO43583 VBP1-203ENST00000535916 944 ntTSL 2 BASIC1.76□□□□□ -2.13
DENRO43583 MIR3162-201ENST00000581818 82 ntBASIC1.76□□□□□ -2.13
DENRO43583 AC016382.1-201ENST00000583580 387 ntTSL 3 BASIC1.76□□□□□ -2.13
DENRO43583 AC008507.2-201ENST00000588402 1176 ntBASIC1.76□□□□□ -2.13
DENRO43583 LINC01897-203ENST00000591503 369 ntTSL 2 BASIC1.76□□□□□ -2.13
DENRO43583 AC069304.2-201ENST00000605154 435 ntBASIC1.76□□□□□ -2.13
DENRO43583 AC026790.2-201ENST00000606282 430 ntBASIC1.76□□□□□ -2.13
DENRO43583 AC107308.1-201ENST00000615897 301 ntBASIC1.76□□□□□ -2.13
DENRO43583 AL158801.5-201ENST00000623123 465 ntBASIC1.76□□□□□ -2.13
DENRO43583 AL356266.1-201ENST00000623311 483 ntBASIC1.76□□□□□ -2.13
DENRO43583 AC021237.1-201ENST00000504175 1643 ntTSL 2 BASIC1.76□□□□□ -2.13
DENRO43583 HMGB1-201ENST00000326004 821 ntTSL 3 BASIC1.75□□□□□ -2.13
DENRO43583 DNAJC12-202ENST00000339758 1064 ntTSL 1 (best) BASIC1.75□□□□□ -2.13
DENRO43583 RNU6-97P-201ENST00000363387 104 ntBASIC1.75□□□□□ -2.13
DENRO43583 RNU6-236P-201ENST00000363886 106 ntBASIC1.75□□□□□ -2.13
DENRO43583 SNORA16.1-201ENST00000364597 132 ntBASIC1.75□□□□□ -2.13
DENRO43583 AKAP14-203ENST00000371425 793 ntAPPRIS ALT2 TSL 5 BASIC1.75□□□□□ -2.13
DENRO43583 RNU6-637P-201ENST00000384050 107 ntBASIC1.75□□□□□ -2.13
DENRO43583 RNU6-1207P-201ENST00000384343 107 ntBASIC1.75□□□□□ -2.13
DENRO43583 Y_RNA.510-201ENST00000384511 114 ntBASIC1.75□□□□□ -2.13
DENRO43583 RNU6-114P-201ENST00000384704 105 ntBASIC1.75□□□□□ -2.13
DENRO43583 MIR147B-201ENST00000390185 80 ntBASIC1.75□□□□□ -2.13
DENRO43583 BTF3P7-201ENST00000407097 488 ntBASIC1.75□□□□□ -2.13
DENRO43583 AL033539.1-201ENST00000427775 743 ntTSL 3 BASIC1.75□□□□□ -2.13
DENRO43583 MICF-203ENST00000432679 129 ntBASIC1.75□□□□□ -2.13
DENRO43583 MTND2P20-201ENST00000440805 661 ntBASIC1.75□□□□□ -2.13
DENRO43583 HIGD1AP2-201ENST00000446367 280 ntBASIC1.75□□□□□ -2.13
DENRO43583 MAST4-AS1-201ENST00000451496 777 ntTSL 2 BASIC1.75□□□□□ -2.13
DENRO43583 RPL23AP3-201ENST00000453844 468 ntBASIC1.75□□□□□ -2.13
DENRO43583 TMEM212-IT1-201ENST00000456146 470 ntTSL 3 BASIC1.75□□□□□ -2.13
DENRO43583 RPL31P50-201ENST00000471002 296 ntBASIC1.75□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 82.9 ms