Protein–RNA interactions for Protein: O43365

HOXA3, Homeobox protein Hox-A3, humanhuman

Predicted RBP Predictions only

Length 443 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA3O43365 CACNB4-273ENST00000638091 4061 ntTSL 5 BASIC3.69□□□□□ -1.82
HOXA3O43365 ELAVL4-203ENST00000371821 3349 ntTSL 5 BASIC3.69□□□□□ -1.82
HOXA3O43365 RACGAP1-202ENST00000427314 3229 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
HOXA3O43365 FOXP2-207ENST00000393494 2664 ntAPPRIS P2 TSL 5 BASIC3.68□□□□□ -1.82
HOXA3O43365 SPAG5-AS1-202ENST00000424210 1551 ntTSL 2 BASIC3.68□□□□□ -1.82
HOXA3O43365 PJA2-202ENST00000361557 4645 ntAPPRIS P1 TSL 2 BASIC3.68□□□□□ -1.82
HOXA3O43365 PSMD1-213ENST00000619128 3161 ntAPPRIS ALT1 TSL 5 BASIC3.68□□□□□ -1.82
HOXA3O43365 PPIP5K2-217ENST00000627916 6010 ntAPPRIS ALT2 TSL 5 BASIC3.68□□□□□ -1.82
HOXA3O43365 SKIL-201ENST00000259119 3057 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
HOXA3O43365 ATP7A-201ENST00000341514 8483 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
HOXA3O43365 ZRANB3-201ENST00000264159 4046 ntAPPRIS P3 TSL 1 (best) BASIC3.68□□□□□ -1.82
HOXA3O43365 LYST-201ENST00000389793 13480 ntAPPRIS P1 TSL 5 BASIC3.68□□□□□ -1.82
HOXA3O43365 Y_RNA.47-201ENST00000362697 108 ntBASIC3.68□□□□□ -1.82
HOXA3O43365 Y_RNA.149-201ENST00000363558 117 ntBASIC3.68□□□□□ -1.82
HOXA3O43365 Y_RNA.245-201ENST00000364493 95 ntBASIC3.68□□□□□ -1.82
HOXA3O43365 RNA5SP479-201ENST00000364858 117 ntBASIC3.68□□□□□ -1.82
HOXA3O43365 RNU6-596P-201ENST00000365395 98 ntBASIC3.68□□□□□ -1.82
HOXA3O43365 Y_RNA.401-201ENST00000383965 117 ntBASIC3.68□□□□□ -1.82
HOXA3O43365 Y_RNA.455-201ENST00000384230 98 ntBASIC3.68□□□□□ -1.82
HOXA3O43365 Y_RNA.485-201ENST00000384395 102 ntBASIC3.68□□□□□ -1.82
HOXA3O43365 RNU6-790P-201ENST00000384479 105 ntBASIC3.68□□□□□ -1.82
HOXA3O43365 Y_RNA.645-201ENST00000391229 102 ntBASIC3.68□□□□□ -1.82
HOXA3O43365 AP000580.1-201ENST00000404439 358 ntBASIC3.68□□□□□ -1.82
HOXA3O43365 HNRNPDLP1-201ENST00000412834 550 ntBASIC3.68□□□□□ -1.82
HOXA3O43365 RPL17P36-201ENST00000420302 549 ntBASIC3.68□□□□□ -1.82
HOXA3O43365 BX276092.3-201ENST00000424182 230 ntBASIC3.68□□□□□ -1.82
HOXA3O43365 GAS5-208ENST00000425771 242 ntTSL 3 BASIC3.68□□□□□ -1.82
HOXA3O43365 AC007566.1-201ENST00000427458 643 ntTSL 5 BASIC3.68□□□□□ -1.82
HOXA3O43365 AC004975.1-201ENST00000428733 208 ntBASIC3.68□□□□□ -1.82
HOXA3O43365 AL133396.1-201ENST00000432048 687 ntBASIC3.68□□□□□ -1.82
HOXA3O43365 AC004938.1-201ENST00000438468 308 ntBASIC3.68□□□□□ -1.82
HOXA3O43365 AC007099.2-201ENST00000444852 336 ntTSL 5 BASIC3.68□□□□□ -1.82
HOXA3O43365 FABP5P15-201ENST00000453566 214 ntBASIC3.68□□□□□ -1.82
HOXA3O43365 AL445433.1-201ENST00000457507 257 ntBASIC3.68□□□□□ -1.82
HOXA3O43365 LINC02017-201ENST00000496829 474 ntTSL 3 BASIC3.68□□□□□ -1.82
HOXA3O43365 AC105914.2-201ENST00000507525 233 ntTSL 3 BASIC3.68□□□□□ -1.82
HOXA3O43365 AC116655.1-201ENST00000508324 901 ntBASIC3.68□□□□□ -1.82
HOXA3O43365 AC021242.2-201ENST00000522765 454 ntTSL 3 BASIC3.68□□□□□ -1.82
HOXA3O43365 ATP5F1P5-201ENST00000526403 760 ntBASIC3.68□□□□□ -1.82
HOXA3O43365 AP003400.1-201ENST00000528319 231 ntTSL 5 BASIC3.68□□□□□ -1.82
HOXA3O43365 GNAI2P1-201ENST00000541815 315 ntBASIC3.68□□□□□ -1.82
HOXA3O43365 AC004024.1-201ENST00000549244 247 ntBASIC3.68□□□□□ -1.82
HOXA3O43365 PCED1B-AS1-208ENST00000551898 359 ntTSL 3 BASIC3.68□□□□□ -1.82
HOXA3O43365 AC126177.2-201ENST00000552154 452 ntTSL 3 BASIC3.68□□□□□ -1.82
HOXA3O43365 AC125603.1-201ENST00000552718 366 ntTSL 3 BASIC3.68□□□□□ -1.82
HOXA3O43365 LINC02277-201ENST00000553386 453 ntTSL 2 BASIC3.68□□□□□ -1.82
HOXA3O43365 AC104002.1-201ENST00000557025 380 ntTSL 3 BASIC3.68□□□□□ -1.82
HOXA3O43365 AC004817.2-201ENST00000561794 651 ntBASIC3.68□□□□□ -1.82
HOXA3O43365 AC074052.2-201ENST00000562516 214 ntTSL 3 BASIC3.68□□□□□ -1.82
HOXA3O43365 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC3.68□□□□□ -1.82
HOXA3O43365 RN7SL176P-201ENST00000580352 264 ntBASIC3.68□□□□□ -1.82
HOXA3O43365 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC3.68□□□□□ -1.82
HOXA3O43365 KLHL23-207ENST00000602521 630 ntTSL 3 BASIC3.68□□□□□ -1.82
HOXA3O43365 ARF4P1-201ENST00000605447 541 ntBASIC3.68□□□□□ -1.82
HOXA3O43365 DAOA-AS1_2.1-201ENST00000614829 187 ntBASIC3.68□□□□□ -1.82
HOXA3O43365 Z69720.2-201ENST00000624755 279 ntBASIC3.68□□□□□ -1.82
HOXA3O43365 LINC00976-201ENST00000625513 783 ntTSL 3 BASIC3.68□□□□□ -1.82
HOXA3O43365 TMEM71-201ENST00000356838 1993 ntAPPRIS P3 TSL 1 (best) BASIC3.68□□□□□ -1.82
HOXA3O43365 ZNF808-201ENST00000359798 3600 ntAPPRIS P1 TSL 5 BASIC3.68□□□□□ -1.82
HOXA3O43365 TFPI-203ENST00000392365 3649 ntAPPRIS P1 TSL 5 BASIC3.68□□□□□ -1.82
HOXA3O43365 LINC01102-204ENST00000451400 3778 ntTSL 2 BASIC3.68□□□□□ -1.82
HOXA3O43365 FAM111B-206ENST00000620384 3405 ntAPPRIS P1 TSL 2 BASIC3.68□□□□□ -1.82
HOXA3O43365 C6-201ENST00000263413 3661 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
HOXA3O43365 UTS2B-201ENST00000340524 2395 ntAPPRIS P1 TSL 2 BASIC3.68□□□□□ -1.82
HOXA3O43365 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
HOXA3O43365 MBNL1-211ENST00000463374 5092 ntAPPRIS P4 TSL 1 (best) BASIC3.68□□□□□ -1.82
HOXA3O43365 AL445487.1-201ENST00000415694 1580 ntBASIC3.68□□□□□ -1.82
HOXA3O43365 RPAP2-203ENST00000610020 16993 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
HOXA3O43365 SOCS5-201ENST00000306503 4771 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
HOXA3O43365 CLCA1-201ENST00000234701 3310 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
HOXA3O43365 AL136964.1-201ENST00000622038 2990 ntBASIC3.67□□□□□ -1.82
HOXA3O43365 LDHAL6CP-202ENST00000550738 3224 ntBASIC3.67□□□□□ -1.82
HOXA3O43365 UNC13C-201ENST00000260323 12946 ntAPPRIS P1 TSL 5 BASIC3.67□□□□□ -1.82
HOXA3O43365 SNX10-209ENST00000619420 2361 ntAPPRIS ALT1 TSL 5 BASIC3.67□□□□□ -1.82
HOXA3O43365 KANSL1L-209ENST00000457374 2264 ntTSL 2 BASIC3.67□□□□□ -1.82
HOXA3O43365 RNU6-384P-201ENST00000364900 104 ntBASIC3.67□□□□□ -1.82
HOXA3O43365 Y_RNA.452-201ENST00000384202 108 ntBASIC3.67□□□□□ -1.82
HOXA3O43365 MIR659-201ENST00000384963 97 ntBASIC3.67□□□□□ -1.82
HOXA3O43365 RNU6-174P-201ENST00000410406 106 ntBASIC3.67□□□□□ -1.82
HOXA3O43365 RNU2-23P-201ENST00000410545 195 ntBASIC3.67□□□□□ -1.82
HOXA3O43365 LINC01737-201ENST00000412647 403 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
HOXA3O43365 AL592148.1-201ENST00000413568 445 ntBASIC3.67□□□□□ -1.82
HOXA3O43365 AC051618.1-201ENST00000414295 207 ntTSL 3 BASIC3.67□□□□□ -1.82
HOXA3O43365 EI24P1-201ENST00000416584 867 ntBASIC3.67□□□□□ -1.82
HOXA3O43365 AL096701.2-201ENST00000416920 238 ntBASIC3.67□□□□□ -1.82
HOXA3O43365 AC073521.1-201ENST00000418679 625 ntTSL 3 BASIC3.67□□□□□ -1.82
HOXA3O43365 CYP4F29P-201ENST00000420685 446 ntBASIC3.67□□□□□ -1.82
HOXA3O43365 AL513365.2-201ENST00000423060 529 ntTSL 2 BASIC3.67□□□□□ -1.82
HOXA3O43365 TTTY8-202ENST00000426035 518 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
HOXA3O43365 AL162384.1-201ENST00000437881 499 ntTSL 2 BASIC3.67□□□□□ -1.82
HOXA3O43365 NRG3-AS1-201ENST00000448936 555 ntTSL 2 BASIC3.67□□□□□ -1.82
HOXA3O43365 NHS-AS1-201ENST00000452788 366 ntTSL 3 BASIC3.67□□□□□ -1.82
HOXA3O43365 TTTY8B-202ENST00000455570 518 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
HOXA3O43365 HMGN1P11-201ENST00000508668 303 ntBASIC3.67□□□□□ -1.82
HOXA3O43365 AC113155.1-201ENST00000511141 769 ntBASIC3.67□□□□□ -1.82
HOXA3O43365 AC097103.1-201ENST00000512398 273 ntTSL 3 BASIC3.67□□□□□ -1.82
HOXA3O43365 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC3.67□□□□□ -1.82
HOXA3O43365 AC010197.1-201ENST00000541860 578 ntTSL 4 BASIC3.67□□□□□ -1.82
HOXA3O43365 SUB1P3-201ENST00000564581 315 ntBASIC3.67□□□□□ -1.82
HOXA3O43365 7SK.7-201ENST00000603504 247 ntBASIC3.67□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 207.9 ms