Protein–RNA interactions for Protein: O43196

MSH5, MutS protein homolog 5, humanhuman

Predictions only

Length 834 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5O43196 Metazoa_SRP.129-201ENST00000619776 251 ntBASIC8.56□□□□□ -1.04
MSH5O43196 BTLA-201ENST00000334529 3213 ntAPPRIS P3 TSL 1 (best) BASIC8.56□□□□□ -1.04
MSH5O43196 OR7C1-205ENST00000642030 11778 ntAPPRIS P1 BASIC8.56□□□□□ -1.04
MSH5O43196 MED1-201ENST00000300651 5844 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
MSH5O43196 MLH3-202ENST00000380968 7819 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
MSH5O43196 FILIP1L-209ENST00000487087 2321 ntTSL 5 BASIC8.55□□□□□ -1.04
MSH5O43196 ROR1-AS1-202ENST00000424995 2189 ntTSL 2 BASIC8.55□□□□□ -1.04
MSH5O43196 TPRG1-204ENST00000433971 2296 ntAPPRIS P1 TSL 2 BASIC8.55□□□□□ -1.04
MSH5O43196 FYB2-201ENST00000343433 3135 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
MSH5O43196 MFN1-201ENST00000263969 2754 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
MSH5O43196 RNU6-363P-201ENST00000362895 105 ntBASIC8.55□□□□□ -1.04
MSH5O43196 RNU6-1138P-201ENST00000365359 106 ntBASIC8.55□□□□□ -1.04
MSH5O43196 RNU6-649P-201ENST00000384463 107 ntBASIC8.55□□□□□ -1.04
MSH5O43196 AL158837.1-201ENST00000417644 452 ntTSL 2 BASIC8.55□□□□□ -1.04
MSH5O43196 AL359073.1-201ENST00000448036 403 ntBASIC8.55□□□□□ -1.04
MSH5O43196 SNORD11-201ENST00000459124 84 ntBASIC8.55□□□□□ -1.04
MSH5O43196 AC009127.1-201ENST00000467090 155 ntBASIC8.55□□□□□ -1.04
MSH5O43196 RN7SL271P-201ENST00000487601 295 ntBASIC8.55□□□□□ -1.04
MSH5O43196 AP002453.1-201ENST00000492327 668 ntBASIC8.55□□□□□ -1.04
MSH5O43196 RN7SL187P-201ENST00000495587 303 ntBASIC8.55□□□□□ -1.04
MSH5O43196 AC087575.1-201ENST00000585087 229 ntBASIC8.55□□□□□ -1.04
MSH5O43196 RABGAP1L-218ENST00000489615 6821 ntTSL 1 (best) BASIC8.55□□□□□ -1.04
MSH5O43196 AC093278.2-201ENST00000564956 2485 ntBASIC8.55□□□□□ -1.04
MSH5O43196 MME-211ENST00000492661 2854 ntAPPRIS P1 TSL 2 BASIC8.55□□□□□ -1.04
MSH5O43196 NUP43-201ENST00000340413 3874 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
MSH5O43196 PDGFRA-201ENST00000257290 6576 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
MSH5O43196 AP001605.1-201ENST00000420186 2603 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
MSH5O43196 TRPC4-210ENST00000625583 3009 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
MSH5O43196 ZNF300P1-202ENST00000520773 3115 ntTSL 5 BASIC8.54□□□□□ -1.04
MSH5O43196 MAGT1-204ENST00000610432 4019 ntAPPRIS P2 TSL 1 (best) BASIC8.54□□□□□ -1.04
MSH5O43196 ABLIM1-207ENST00000392955 7408 ntTSL 5 BASIC8.54□□□□□ -1.04
MSH5O43196 ESRRG-203ENST00000361395 5216 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
MSH5O43196 ESRRG-209ENST00000408911 5216 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
MSH5O43196 FAM162A-201ENST00000232125 801 ntTSL 2 BASIC8.54□□□□□ -1.04
MSH5O43196 AC079355.1-201ENST00000421770 223 ntBASIC8.54□□□□□ -1.04
MSH5O43196 CHEK2P5-201ENST00000423877 246 ntBASIC8.54□□□□□ -1.04
MSH5O43196 AC019205.3-201ENST00000424573 156 ntBASIC8.54□□□□□ -1.04
MSH5O43196 AC083806.1-201ENST00000468934 316 ntBASIC8.54□□□□□ -1.04
MSH5O43196 RN7SL177P-201ENST00000476596 299 ntBASIC8.54□□□□□ -1.04
MSH5O43196 RPL36AP21-201ENST00000490372 323 ntBASIC8.54□□□□□ -1.04
MSH5O43196 OR9P1P-201ENST00000496431 281 ntBASIC8.54□□□□□ -1.04
MSH5O43196 CYCSP25-201ENST00000525280 316 ntBASIC8.54□□□□□ -1.04
MSH5O43196 AC004034.1-201ENST00000573260 510 ntTSL 3 BASIC8.54□□□□□ -1.04
MSH5O43196 SNORA16A-202ENST00000628458 135 ntBASIC8.54□□□□□ -1.04
MSH5O43196 MUT-201ENST00000274813 3749 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
MSH5O43196 IL23R-205ENST00000637002 2208 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
MSH5O43196 LINC01828-203ENST00000452716 3250 ntTSL 5 BASIC8.54□□□□□ -1.04
MSH5O43196 LINC01630-202ENST00000578152 3188 ntTSL 2 BASIC8.54□□□□□ -1.04
MSH5O43196 DTHD1-206ENST00000639862 3819 ntTSL 5 BASIC8.54□□□□□ -1.04
MSH5O43196 NAV1-201ENST00000367295 11645 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
MSH5O43196 DMD-211ENST00000378707 7410 ntTSL 5 BASIC8.53□□□□□ -1.04
MSH5O43196 CTNND1-218ENST00000528232 5745 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
MSH5O43196 BCLAF1-202ENST00000392348 2610 ntTSL 5 BASIC8.53□□□□□ -1.04
MSH5O43196 BCLAF1P2-201ENST00000624956 2609 ntBASIC8.53□□□□□ -1.04
MSH5O43196 PCDH15-212ENST00000395442 2970 ntTSL 5 BASIC8.53□□□□□ -1.04
MSH5O43196 AC004076.2-201ENST00000620532 3323 ntBASIC8.53□□□□□ -1.04
MSH5O43196 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC8.53□□□□□ -1.04
MSH5O43196 SORCS1-209ENST00000612154 6862 ntTSL 5 BASIC8.53□□□□□ -1.04
MSH5O43196 CNOT1-216ENST00000569240 7660 ntAPPRIS ALT1 TSL 1 (best) BASIC8.53□□□□□ -1.04
MSH5O43196 Y_RNA.57-201ENST00000362806 113 ntBASIC8.53□□□□□ -1.04
MSH5O43196 SNORA38B-201ENST00000363524 131 ntBASIC8.53□□□□□ -1.04
MSH5O43196 GM2AP2-201ENST00000491764 562 ntBASIC8.53□□□□□ -1.04
MSH5O43196 AC087286.3-201ENST00000561409 953 ntTSL 3 BASIC8.53□□□□□ -1.04
MSH5O43196 AC034105.4-201ENST00000568304 277 ntBASIC8.53□□□□□ -1.04
MSH5O43196 ZNF682-208ENST00000596019 552 ntTSL 5 BASIC8.53□□□□□ -1.04
MSH5O43196 OR7D4-202ENST00000641244 4968 ntAPPRIS P1 BASIC8.53□□□□□ -1.04
MSH5O43196 HCG18-239ENST00000454129 4433 ntTSL 4 BASIC8.53□□□□□ -1.04
MSH5O43196 USP16-201ENST00000334352 3004 ntAPPRIS P3 TSL 5 BASIC8.53□□□□□ -1.04
MSH5O43196 TDRD1-201ENST00000251864 4510 ntAPPRIS P2 TSL 1 (best) BASIC8.53□□□□□ -1.04
MSH5O43196 UNC80-201ENST00000272845 13440 ntTSL 5 BASIC8.53□□□□□ -1.04
MSH5O43196 UBE3A-205ENST00000566215 3176 ntAPPRIS P3 TSL 1 (best) BASIC8.53□□□□□ -1.04
MSH5O43196 SELE-201ENST00000333360 3857 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
MSH5O43196 SLAIN1-203ENST00000351546 2394 ntTSL 2 BASIC8.53□□□□□ -1.04
MSH5O43196 SCN1A-204ENST00000423058 8191 ntAPPRIS ALT1 TSL 1 (best) BASIC8.52□□□□□ -1.04
MSH5O43196 NDST4-204ENST00000613194 3439 ntTSL 5 BASIC8.52□□□□□ -1.04
MSH5O43196 ZNF121-202ENST00000586602 7177 ntAPPRIS P1 TSL 2 BASIC8.52□□□□□ -1.04
MSH5O43196 TTI1-203ENST00000449821 3791 ntAPPRIS P1 TSL 2 BASIC8.52□□□□□ -1.05
MSH5O43196 PROX1-202ENST00000366958 8240 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
MSH5O43196 TMEM132B-206ENST00000613307 9659 ntAPPRIS ALT2 TSL 1 (best) BASIC8.52□□□□□ -1.05
MSH5O43196 TRIM34-204ENST00000514226 2493 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
MSH5O43196 TSPAN14-207ENST00000429989 16183 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
MSH5O43196 RNU6-349P-201ENST00000362402 107 ntBASIC8.52□□□□□ -1.05
MSH5O43196 DEFB119-202ENST00000376315 324 ntAPPRIS ALT2 TSL 1 (best) BASIC8.52□□□□□ -1.05
MSH5O43196 RNU6-800P-201ENST00000384473 103 ntBASIC8.52□□□□□ -1.05
MSH5O43196 AC004990.1-201ENST00000431722 564 ntTSL 4 BASIC8.52□□□□□ -1.05
MSH5O43196 RN7SL738P-201ENST00000470264 297 ntBASIC8.52□□□□□ -1.05
MSH5O43196 SRIP1-201ENST00000489235 288 ntBASIC8.52□□□□□ -1.05
MSH5O43196 ENPP7P11-201ENST00000505915 627 ntBASIC8.52□□□□□ -1.05
MSH5O43196 RNU7-172P-201ENST00000517125 64 ntBASIC8.52□□□□□ -1.05
MSH5O43196 RNU6-1270P-201ENST00000517128 108 ntBASIC8.52□□□□□ -1.05
MSH5O43196 AC068992.1-201ENST00000521411 543 ntTSL 5 BASIC8.52□□□□□ -1.05
MSH5O43196 RNU6-91P-201ENST00000607774 107 ntBASIC8.52□□□□□ -1.05
MSH5O43196 AC132068.1-201ENST00000623805 459 ntBASIC8.52□□□□□ -1.05
MSH5O43196 AC008040.1-202ENST00000483289 6251 ntTSL 1 (best) BASIC8.52□□□□□ -1.05
MSH5O43196 TM9SF4-202ENST00000398022 3978 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
MSH5O43196 DCX-203ENST00000371993 9231 ntAPPRIS ALT1 TSL 5 BASIC8.52□□□□□ -1.05
MSH5O43196 ZNF137P-201ENST00000456718 1920 ntBASIC8.52□□□□□ -1.05
MSH5O43196 CYP3A4-201ENST00000336411 2153 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
MSH5O43196 MPP7-201ENST00000337532 5080 ntAPPRIS P1 TSL 5 BASIC8.52□□□□□ -1.05
MSH5O43196 CSMD2-210ENST00000619121 13430 ntAPPRIS ALT2 TSL 5 BASIC8.52□□□□□ -1.05
Retrieved 100 of 98,524 protein–RNA pairs in 153.2 ms