Protein–RNA interactions for Protein: O14646

CHD1, Chromodomain-helicase-DNA-binding protein 1, humanhuman

Predictions only

Length 1,710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1O14646 HAR1A.1-201ENST00000459583 118 ntBASIC1.54□□□□□ -2.16
CHD1O14646 AC096736.1-201ENST00000512609 947 ntTSL 3 BASIC1.54□□□□□ -2.16
CHD1O14646 AP002884.4-201ENST00000527589 594 ntTSL 3 BASIC1.54□□□□□ -2.16
CHD1O14646 AC107954.1-201ENST00000565906 727 ntBASIC1.54□□□□□ -2.16
CHD1O14646 LINC01515-204ENST00000595269 402 ntTSL 5 BASIC1.54□□□□□ -2.16
CHD1O14646 LINC02109-204ENST00000602801 563 ntTSL 4 BASIC1.54□□□□□ -2.16
CHD1O14646 ZNF382-210ENST00000639288 834 ntTSL 5 BASIC1.54□□□□□ -2.16
CHD1O14646 OR5H6-202ENST00000641416 1032 ntAPPRIS P1 BASIC1.54□□□□□ -2.16
CHD1O14646 AC080100.1-201ENST00000624239 5356 ntBASIC1.53□□□□□ -2.16
CHD1O14646 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.53□□□□□ -2.16
CHD1O14646 AL589743.1-201ENST00000551932 2712 ntBASIC1.53□□□□□ -2.16
CHD1O14646 TMEM27-201ENST00000380342 1578 ntAPPRIS P1 TSL 1 (best) BASIC1.53□□□□□ -2.16
CHD1O14646 DEFB106B-201ENST00000335479 316 ntAPPRIS P1 TSL 1 (best) BASIC1.53□□□□□ -2.16
CHD1O14646 Y_RNA.85-201ENST00000363014 111 ntBASIC1.53□□□□□ -2.16
CHD1O14646 AC006548.1-201ENST00000427470 102 ntBASIC1.53□□□□□ -2.16
CHD1O14646 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC1.53□□□□□ -2.16
CHD1O14646 JTBP1-201ENST00000441314 247 ntBASIC1.53□□□□□ -2.16
CHD1O14646 AL050303.1-201ENST00000444356 458 ntTSL 2 BASIC1.53□□□□□ -2.16
CHD1O14646 AC114485.1-201ENST00000447916 657 ntTSL 3 BASIC1.53□□□□□ -2.16
CHD1O14646 AC108157.1-201ENST00000510511 539 ntBASIC1.53□□□□□ -2.16
CHD1O14646 AC008676.3-201ENST00000521237 435 ntBASIC1.53□□□□□ -2.16
CHD1O14646 FAM71BP1-201ENST00000604431 523 ntBASIC1.53□□□□□ -2.16
CHD1O14646 MIR2909-201ENST00000617113 69 ntBASIC1.53□□□□□ -2.16
CHD1O14646 FP475955.2-201ENST00000623720 458 ntTSL 2 BASIC1.53□□□□□ -2.16
CHD1O14646 CR381572.1-201ENST00000625098 102 ntBASIC1.53□□□□□ -2.16
CHD1O14646 AL627224.1-201ENST00000448334 444 ntBASIC1.52□□□□□ -2.17
CHD1O14646 RPS27AP10-201ENST00000496103 208 ntBASIC1.52□□□□□ -2.17
CHD1O14646 RNA5SP337-201ENST00000517007 109 ntBASIC1.52□□□□□ -2.17
CHD1O14646 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC1.52□□□□□ -2.17
CHD1O14646 AL445584.2-201ENST00000614030 616 ntTSL 5 BASIC1.52□□□□□ -2.17
CHD1O14646 AL022578.1-201ENST00000439330 1433 ntBASIC1.52□□□□□ -2.17
CHD1O14646 CCT4P2-201ENST00000233836 1548 ntBASIC1.52□□□□□ -2.17
CHD1O14646 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC1.52□□□□□ -2.17
CHD1O14646 DEFB108F-201ENST00000344638 222 ntBASIC1.52□□□□□ -2.17
CHD1O14646 RPS4XP3-201ENST00000398541 413 ntBASIC1.52□□□□□ -2.17
CHD1O14646 AL161449.1-201ENST00000414531 1199 ntBASIC1.52□□□□□ -2.17
CHD1O14646 AL591704.2-201ENST00000421658 181 ntBASIC1.52□□□□□ -2.17
CHD1O14646 AL356867.1-201ENST00000429623 299 ntBASIC1.52□□□□□ -2.17
CHD1O14646 AC009296.1-201ENST00000443146 155 ntBASIC1.52□□□□□ -2.17
CHD1O14646 AC108120.2-201ENST00000512973 294 ntBASIC1.52□□□□□ -2.17
CHD1O14646 AC093879.2-201ENST00000513645 427 ntTSL 3 BASIC1.52□□□□□ -2.17
CHD1O14646 RNU6-319P-201ENST00000516025 108 ntBASIC1.52□□□□□ -2.17
CHD1O14646 RNA5SP395-201ENST00000516567 118 ntBASIC1.52□□□□□ -2.17
CHD1O14646 SNORA31.18-201ENST00000517043 134 ntBASIC1.52□□□□□ -2.17
CHD1O14646 LINC02165-201ENST00000563061 443 ntTSL 3 BASIC1.52□□□□□ -2.17
CHD1O14646 AC105094.2-203ENST00000590357 555 ntTSL 4 BASIC1.52□□□□□ -2.17
CHD1O14646 7SK.7-201ENST00000603504 247 ntBASIC1.52□□□□□ -2.17
CHD1O14646 MIR150-201ENST00000385048 84 ntBASIC1.51□□□□□ -2.17
CHD1O14646 TMEM167AP1-201ENST00000423409 219 ntBASIC1.51□□□□□ -2.17
CHD1O14646 ARF4P4-201ENST00000439608 520 ntBASIC1.51□□□□□ -2.17
CHD1O14646 AC022880.1-201ENST00000534017 973 ntBASIC1.51□□□□□ -2.17
CHD1O14646 AC004943.1-202ENST00000558618 503 ntTSL 3 BASIC1.51□□□□□ -2.17
CHD1O14646 AC073111.2-201ENST00000605657 1075 ntBASIC1.51□□□□□ -2.17
CHD1O14646 AC159540.2-206ENST00000619371 355 ntTSL 3 BASIC1.51□□□□□ -2.17
CHD1O14646 AC018755.4-201ENST00000619715 454 ntBASIC1.51□□□□□ -2.17
CHD1O14646 SPINK9-201ENST00000377906 453 ntAPPRIS P2 TSL 1 (best) BASIC1.5□□□□□ -2.17
CHD1O14646 MIR676-201ENST00000390702 67 ntBASIC1.5□□□□□ -2.17
CHD1O14646 RN7SKP200-201ENST00000410564 320 ntBASIC1.5□□□□□ -2.17
CHD1O14646 AC105343.1-201ENST00000505586 358 ntTSL 3 BASIC1.5□□□□□ -2.17
CHD1O14646 AC104806.1-201ENST00000508720 308 ntBASIC1.5□□□□□ -2.17
CHD1O14646 LINC02210-208ENST00000585118 546 ntTSL 1 (best) BASIC1.5□□□□□ -2.17
CHD1O14646 AL355812.1-201ENST00000603215 216 ntBASIC1.5□□□□□ -2.17
CHD1O14646 OR8H1-201ENST00000313022 1038 ntAPPRIS P2 BASIC1.49□□□□□ -2.17
CHD1O14646 RNU6-670P-201ENST00000364312 104 ntBASIC1.49□□□□□ -2.17
CHD1O14646 AL358176.2-201ENST00000425769 204 ntBASIC1.49□□□□□ -2.17
CHD1O14646 OSTCP8-201ENST00000445117 448 ntBASIC1.49□□□□□ -2.17
CHD1O14646 MAST4-AS1-201ENST00000451496 777 ntTSL 2 BASIC1.49□□□□□ -2.17
CHD1O14646 LINC02301-201ENST00000553760 773 ntTSL 3 BASIC1.49□□□□□ -2.17
CHD1O14646 AC100778.1-201ENST00000583579 332 ntTSL 3 BASIC1.49□□□□□ -2.17
CHD1O14646 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC1.49□□□□□ -2.17
CHD1O14646 AC078899.2-201ENST00000595282 212 ntBASIC1.49□□□□□ -2.17
CHD1O14646 AC109454.4-201ENST00000623411 649 ntBASIC1.49□□□□□ -2.17
CHD1O14646 RNU6-837P-201ENST00000391056 108 ntBASIC1.49□□□□□ -2.17
CHD1O14646 AC004870.3-202ENST00000412996 432 ntTSL 3 BASIC1.49□□□□□ -2.17
CHD1O14646 TATDN1P1-201ENST00000414123 891 ntBASIC1.49□□□□□ -2.17
CHD1O14646 RPL30P4-201ENST00000429309 333 ntBASIC1.49□□□□□ -2.17
CHD1O14646 AC016691.1-201ENST00000441321 413 ntBASIC1.49□□□□□ -2.17
CHD1O14646 ANKRD26P4-201ENST00000455755 950 ntBASIC1.49□□□□□ -2.17
CHD1O14646 AC126407.1-201ENST00000563044 566 ntTSL 4 BASIC1.49□□□□□ -2.17
CHD1O14646 MIR3616-201ENST00000584070 92 ntBASIC1.49□□□□□ -2.17
CHD1O14646 AC005498.1-201ENST00000592125 465 ntBASIC1.49□□□□□ -2.17
CHD1O14646 AC106052.1-201ENST00000608029 497 ntBASIC1.49□□□□□ -2.17
CHD1O14646 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC1.48□□□□□ -2.17
CHD1O14646 PTGES3P2-201ENST00000407942 482 ntBASIC1.48□□□□□ -2.17
CHD1O14646 MYO16-AS2-201ENST00000412809 436 ntTSL 3 BASIC1.48□□□□□ -2.17
CHD1O14646 NUP35P2-201ENST00000416748 943 ntBASIC1.48□□□□□ -2.17
CHD1O14646 RNF2P1-201ENST00000442955 1010 ntBASIC1.48□□□□□ -2.17
CHD1O14646 TRGVB-201ENST00000453257 471 ntBASIC1.48□□□□□ -2.17
CHD1O14646 AC021736.1-201ENST00000521143 563 ntTSL 4 BASIC1.48□□□□□ -2.17
CHD1O14646 LINC02309-201ENST00000553679 207 ntTSL 3 BASIC1.48□□□□□ -2.17
CHD1O14646 AL355773.1-201ENST00000554458 459 ntTSL 3 BASIC1.48□□□□□ -2.17
CHD1O14646 AL671511.2-201ENST00000611838 659 ntTSL 2 BASIC1.48□□□□□ -2.17
CHD1O14646 AC025588.4-201ENST00000615802 908 ntBASIC1.48□□□□□ -2.17
CHD1O14646 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC1.48□□□□□ -2.17
CHD1O14646 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC1.47□□□□□ -2.17
CHD1O14646 RNU6-198P-201ENST00000384258 104 ntBASIC1.47□□□□□ -2.17
CHD1O14646 RNU6-920P-201ENST00000410926 92 ntBASIC1.47□□□□□ -2.17
CHD1O14646 OR51A5P-201ENST00000415429 942 ntBASIC1.47□□□□□ -2.17
CHD1O14646 AC104653.1-201ENST00000420579 578 ntTSL 2 BASIC1.47□□□□□ -2.17
CHD1O14646 AC005908.1-201ENST00000468701 347 ntBASIC1.47□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 95.8 ms