Protein–RNA interactions for Protein: H3BMG3

SMKR1, Small lysine-rich protein 1, humanhuman

Predictions only

Length 65 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMKR1H3BMG3 OR13G1-202ENST00000642119 2568 ntAPPRIS P1 BASIC1.93□□□□□ -2.1
SMKR1H3BMG3 CCDC82-202ENST00000423339 1878 ntAPPRIS P2 TSL 1 (best) BASIC1.92□□□□□ -2.1
SMKR1H3BMG3 RGPD6-201ENST00000329516 7165 ntAPPRIS P1 TSL 1 (best) BASIC1.92□□□□□ -2.1
SMKR1H3BMG3 LINC00836-202ENST00000626230 1640 ntTSL 2 BASIC1.92□□□□□ -2.1
SMKR1H3BMG3 Y_RNA.46-201ENST00000362695 102 ntBASIC1.92□□□□□ -2.1
SMKR1H3BMG3 RNA5SP479-201ENST00000364858 117 ntBASIC1.92□□□□□ -2.1
SMKR1H3BMG3 Y_RNA.302-201ENST00000364997 102 ntBASIC1.92□□□□□ -2.1
SMKR1H3BMG3 RNY3P13-201ENST00000365542 102 ntBASIC1.92□□□□□ -2.1
SMKR1H3BMG3 KLRC2-202ENST00000381902 1221 ntAPPRIS P2 TSL 1 (best) BASIC1.92□□□□□ -2.1
SMKR1H3BMG3 RPS12P24-201ENST00000412619 387 ntBASIC1.92□□□□□ -2.1
SMKR1H3BMG3 SSR1P2-201ENST00000415208 787 ntBASIC1.92□□□□□ -2.1
SMKR1H3BMG3 AC005326.1-201ENST00000429197 123 ntBASIC1.92□□□□□ -2.1
SMKR1H3BMG3 LINC02532-205ENST00000430094 628 ntTSL 5 BASIC1.92□□□□□ -2.1
SMKR1H3BMG3 MTND1P20-201ENST00000430341 950 ntBASIC1.92□□□□□ -2.1
SMKR1H3BMG3 AL157937.1-201ENST00000435092 443 ntTSL 3 BASIC1.92□□□□□ -2.1
SMKR1H3BMG3 AC104653.2-201ENST00000435407 416 ntTSL 3 BASIC1.92□□□□□ -2.1
SMKR1H3BMG3 AL117336.1-201ENST00000439198 380 ntTSL 2 BASIC1.92□□□□□ -2.1
SMKR1H3BMG3 CR769776.1-201ENST00000441254 787 ntBASIC1.92□□□□□ -2.1
SMKR1H3BMG3 RGS5-217ENST00000451759 835 ntTSL 3 BASIC1.92□□□□□ -2.1
SMKR1H3BMG3 AC092001.1-201ENST00000453012 261 ntBASIC1.92□□□□□ -2.1
SMKR1H3BMG3 SNRPG-206ENST00000454893 527 ntTSL 3 BASIC1.92□□□□□ -2.1
SMKR1H3BMG3 AC005538.1-201ENST00000455991 594 ntTSL 3 BASIC1.92□□□□□ -2.1
SMKR1H3BMG3 MTCO1P42-201ENST00000457379 726 ntBASIC1.92□□□□□ -2.1
SMKR1H3BMG3 AL441985.1-201ENST00000457727 251 ntBASIC1.92□□□□□ -2.1
SMKR1H3BMG3 SNORD97-201ENST00000459187 142 ntBASIC1.92□□□□□ -2.1
SMKR1H3BMG3 AC117462.1-201ENST00000461186 554 ntTSL 4 BASIC1.92□□□□□ -2.1
SMKR1H3BMG3 RPS3AP43-201ENST00000479743 781 ntBASIC1.92□□□□□ -2.1
SMKR1H3BMG3 RN7SL432P-201ENST00000484057 298 ntBASIC1.92□□□□□ -2.1
SMKR1H3BMG3 RPL22P13-201ENST00000493291 347 ntBASIC1.92□□□□□ -2.1
SMKR1H3BMG3 RN7SL504P-201ENST00000494496 287 ntBASIC1.92□□□□□ -2.1
SMKR1H3BMG3 AC093752.1-212ENST00000500559 453 ntTSL 1 (best) BASIC1.92□□□□□ -2.1
SMKR1H3BMG3 PRR16-204ENST00000505123 1298 ntTSL 3 BASIC1.92□□□□□ -2.1
SMKR1H3BMG3 HSPE1P23-201ENST00000509838 286 ntBASIC1.92□□□□□ -2.1
SMKR1H3BMG3 MTRNR2L5-201ENST00000512524 739 ntAPPRIS P1 BASIC1.92□□□□□ -2.1
SMKR1H3BMG3 AC010261.1-201ENST00000514411 457 ntTSL 5 BASIC1.92□□□□□ -2.1
SMKR1H3BMG3 RNU6-1003P-201ENST00000517099 105 ntBASIC1.92□□□□□ -2.1
SMKR1H3BMG3 RGS4-209ENST00000531057 544 ntTSL 4 BASIC1.92□□□□□ -2.1
SMKR1H3BMG3 AP000756.1-201ENST00000532606 679 ntTSL 2 BASIC1.92□□□□□ -2.1
SMKR1H3BMG3 LINC02235-201ENST00000534675 466 ntTSL 5 BASIC1.92□□□□□ -2.1
SMKR1H3BMG3 AL133241.1-201ENST00000556832 487 ntBASIC1.92□□□□□ -2.1
SMKR1H3BMG3 AC106785.1-201ENST00000565935 262 ntBASIC1.92□□□□□ -2.1
SMKR1H3BMG3 AC104763.2-201ENST00000604179 382 ntBASIC1.92□□□□□ -2.1
SMKR1H3BMG3 AL450336.1-201ENST00000605180 586 ntBASIC1.92□□□□□ -2.1
SMKR1H3BMG3 AC013244.3-201ENST00000605614 388 ntBASIC1.92□□□□□ -2.1
SMKR1H3BMG3 MIR6748-201ENST00000610433 71 ntBASIC1.92□□□□□ -2.1
SMKR1H3BMG3 AC104237.2-201ENST00000612456 443 ntBASIC1.92□□□□□ -2.1
SMKR1H3BMG3 MIR6134-201ENST00000617606 109 ntBASIC1.92□□□□□ -2.1
SMKR1H3BMG3 AL607023.1-201ENST00000620045 248 ntBASIC1.92□□□□□ -2.1
SMKR1H3BMG3 AC068831.8-201ENST00000620171 435 ntBASIC1.92□□□□□ -2.1
SMKR1H3BMG3 THOC1-220ENST00000621904 1083 ntTSL 5 BASIC1.92□□□□□ -2.1
SMKR1H3BMG3 FRG1KP-201ENST00000623592 341 ntBASIC1.92□□□□□ -2.1
SMKR1H3BMG3 ZNF876P-202ENST00000398732 1485 ntBASIC1.92□□□□□ -2.1
SMKR1H3BMG3 CENPE-201ENST00000265148 8612 ntAPPRIS P1 TSL 2 BASIC1.92□□□□□ -2.1
SMKR1H3BMG3 ACTR6-212ENST00000552376 1659 ntTSL 5 BASIC1.92□□□□□ -2.1
SMKR1H3BMG3 N4BP2L2-205ENST00000446957 2071 ntTSL 5 BASIC1.92□□□□□ -2.1
SMKR1H3BMG3 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC1.91□□□□□ -2.1
SMKR1H3BMG3 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC1.91□□□□□ -2.1
SMKR1H3BMG3 Z82195.2-201ENST00000612348 18351 ntBASIC1.91□□□□□ -2.1
SMKR1H3BMG3 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC1.91□□□□□ -2.1
SMKR1H3BMG3 AL139276.1-201ENST00000311910 1001 ntBASIC1.91□□□□□ -2.1
SMKR1H3BMG3 SNORA63.1-201ENST00000362493 131 ntBASIC1.91□□□□□ -2.1
SMKR1H3BMG3 RNU6-288P-201ENST00000363690 104 ntBASIC1.91□□□□□ -2.1
SMKR1H3BMG3 SNORA3A-201ENST00000364113 130 ntBASIC1.91□□□□□ -2.1
SMKR1H3BMG3 CRISP3-203ENST00000371159 872 ntAPPRIS ALT2 TSL 5 BASIC1.91□□□□□ -2.1
SMKR1H3BMG3 Z98749.2-208ENST00000381646 500 ntBASIC1.91□□□□□ -2.1
SMKR1H3BMG3 RNU6-748P-201ENST00000384648 107 ntBASIC1.91□□□□□ -2.1
SMKR1H3BMG3 UBA52P6-201ENST00000399822 382 ntBASIC1.91□□□□□ -2.1
SMKR1H3BMG3 RPS27L-202ENST00000411926 528 ntTSL 3 BASIC1.91□□□□□ -2.1
SMKR1H3BMG3 AL592148.1-201ENST00000413568 445 ntBASIC1.91□□□□□ -2.1
SMKR1H3BMG3 OR51A5P-201ENST00000415429 942 ntBASIC1.91□□□□□ -2.1
SMKR1H3BMG3 AL022400.1-201ENST00000423946 935 ntBASIC1.91□□□□□ -2.1
SMKR1H3BMG3 AC064852.1-201ENST00000427571 851 ntTSL 3 BASIC1.91□□□□□ -2.1
SMKR1H3BMG3 AL356277.3-201ENST00000432484 618 ntTSL 3 BASIC1.91□□□□□ -2.1
SMKR1H3BMG3 AC025038.1-201ENST00000433249 336 ntTSL 3 BASIC1.91□□□□□ -2.1
SMKR1H3BMG3 RAB6C-AS1-202ENST00000433431 123 ntBASIC1.91□□□□□ -2.1
SMKR1H3BMG3 AC018693.1-201ENST00000442829 550 ntTSL 4 BASIC1.91□□□□□ -2.1
SMKR1H3BMG3 KLF3P2-201ENST00000465138 268 ntBASIC1.91□□□□□ -2.1
SMKR1H3BMG3 OARD1-209ENST00000471367 401 ntTSL 2 BASIC1.91□□□□□ -2.1
SMKR1H3BMG3 LINC02174-201ENST00000508977 553 ntTSL 3 BASIC1.91□□□□□ -2.1
SMKR1H3BMG3 PCAT4-202ENST00000514836 373 ntTSL 3 BASIC1.91□□□□□ -2.1
SMKR1H3BMG3 AC087439.2-201ENST00000519498 552 ntTSL 3 BASIC1.91□□□□□ -2.1
SMKR1H3BMG3 SPINK7-205ENST00000523535 299 ntTSL 2 BASIC1.91□□□□□ -2.1
SMKR1H3BMG3 AP003122.3-201ENST00000526316 255 ntBASIC1.91□□□□□ -2.1
SMKR1H3BMG3 AC084851.1-201ENST00000529105 249 ntBASIC1.91□□□□□ -2.1
SMKR1H3BMG3 AP001318.2-201ENST00000533378 492 ntTSL 3 BASIC1.91□□□□□ -2.1
SMKR1H3BMG3 AL450442.1-201ENST00000554042 854 ntTSL 1 (best) BASIC1.91□□□□□ -2.1
SMKR1H3BMG3 AL157955.1-201ENST00000554433 331 ntTSL 3 BASIC1.91□□□□□ -2.1
SMKR1H3BMG3 AC012378.1-201ENST00000561155 364 ntTSL 3 BASIC1.91□□□□□ -2.1
SMKR1H3BMG3 MIR4782-201ENST00000577987 79 ntBASIC1.91□□□□□ -2.1
SMKR1H3BMG3 MTCYBP22-201ENST00000603788 447 ntBASIC1.91□□□□□ -2.1
SMKR1H3BMG3 AL031281.1-201ENST00000604049 488 ntBASIC1.91□□□□□ -2.1
SMKR1H3BMG3 AC105148.1-201ENST00000604961 409 ntBASIC1.91□□□□□ -2.1
SMKR1H3BMG3 AC092106.3-201ENST00000611308 722 ntBASIC1.91□□□□□ -2.1
SMKR1H3BMG3 GPR171-203ENST00000617554 960 ntAPPRIS P1 BASIC1.91□□□□□ -2.1
SMKR1H3BMG3 AC244517.12-201ENST00000623581 663 ntBASIC1.91□□□□□ -2.1
SMKR1H3BMG3 ABBA01000935.2-201ENST00000637477 838 ntBASIC1.91□□□□□ -2.1
SMKR1H3BMG3 PPP2R2A-224ENST00000640787 318 ntTSL 5 BASIC1.91□□□□□ -2.1
SMKR1H3BMG3 ADGRG7-202ENST00000475887 2035 ntTSL 2 BASIC1.91□□□□□ -2.1
SMKR1H3BMG3 HSPA8P4-201ENST00000511877 1920 ntBASIC1.91□□□□□ -2.1
SMKR1H3BMG3 CDC27P3-201ENST00000635418 1910 ntBASIC1.91□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 122.9 ms