Protein–RNA interactions for Protein: A6NIU2

LINC01549, Putative uncharacterized protein encoded by LINC01549, humanhuman

Predictions only

Length 74 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01549A6NIU2 LINC01938-201ENST00000521341 1864 ntTSL 2 BASIC0.49□□□□□ -2.33
LINC01549A6NIU2 IL33-201ENST00000381434 2641 ntAPPRIS P1 TSL 1 (best) BASIC0.49□□□□□ -2.33
LINC01549A6NIU2 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC0.48□□□□□ -2.33
LINC01549A6NIU2 RNU6-457P-201ENST00000363999 107 ntBASIC0.48□□□□□ -2.33
LINC01549A6NIU2 CD80-202ENST00000383669 771 ntTSL 1 (best) BASIC0.48□□□□□ -2.33
LINC01549A6NIU2 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.48□□□□□ -2.33
LINC01549A6NIU2 AC009518.2-201ENST00000418056 731 ntBASIC0.48□□□□□ -2.33
LINC01549A6NIU2 PIGFP2-201ENST00000421400 651 ntBASIC0.48□□□□□ -2.33
LINC01549A6NIU2 AC114808.2-201ENST00000428335 536 ntTSL 4 BASIC0.48□□□□□ -2.33
LINC01549A6NIU2 MYCBP2-AS2-201ENST00000428716 428 ntTSL 5 BASIC0.48□□□□□ -2.33
LINC01549A6NIU2 HMGB1P9-201ENST00000429856 646 ntBASIC0.48□□□□□ -2.33
LINC01549A6NIU2 AC080013.2-201ENST00000460866 323 ntBASIC0.48□□□□□ -2.33
LINC01549A6NIU2 VPS13A-211ENST00000484581 1155 ntTSL 2 BASIC0.48□□□□□ -2.33
LINC01549A6NIU2 RPS3AP22-201ENST00000488297 769 ntBASIC0.48□□□□□ -2.33
LINC01549A6NIU2 AL133373.1-201ENST00000497098 94 ntBASIC0.48□□□□□ -2.33
LINC01549A6NIU2 AC010425.1-201ENST00000511734 554 ntTSL 4 BASIC0.48□□□□□ -2.33
LINC01549A6NIU2 AC093772.1-201ENST00000513519 506 ntTSL 2 BASIC0.48□□□□□ -2.33
LINC01549A6NIU2 AC022447.1-201ENST00000515358 464 ntBASIC0.48□□□□□ -2.33
LINC01549A6NIU2 RNU7-40P-201ENST00000516397 64 ntBASIC0.48□□□□□ -2.33
LINC01549A6NIU2 RNU6-902P-201ENST00000517212 91 ntBASIC0.48□□□□□ -2.33
LINC01549A6NIU2 AC004923.2-201ENST00000529649 369 ntBASIC0.48□□□□□ -2.33
LINC01549A6NIU2 CASP1-212ENST00000531166 300 ntTSL 5 BASIC0.48□□□□□ -2.33
LINC01549A6NIU2 AC021739.1-201ENST00000559631 174 ntBASIC0.48□□□□□ -2.33
LINC01549A6NIU2 AL020996.3-201ENST00000606617 222 ntBASIC0.48□□□□□ -2.33
LINC01549A6NIU2 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC0.48□□□□□ -2.33
LINC01549A6NIU2 AC243585.2-201ENST00000619099 508 ntTSL 3 BASIC0.48□□□□□ -2.33
LINC01549A6NIU2 MIR7157-201ENST00000635801 60 ntBASIC0.48□□□□□ -2.33
LINC01549A6NIU2 RNU6-270P-201ENST00000364131 105 ntBASIC0.47□□□□□ -2.33
LINC01549A6NIU2 RNU6-76P-201ENST00000384060 104 ntBASIC0.47□□□□□ -2.33
LINC01549A6NIU2 MIR92A1-201ENST00000385233 78 ntBASIC0.47□□□□□ -2.33
LINC01549A6NIU2 LINC02331-201ENST00000418927 602 ntTSL 5 BASIC0.47□□□□□ -2.33
LINC01549A6NIU2 DPYD-AS2-201ENST00000422259 788 ntTSL 3 BASIC0.47□□□□□ -2.33
LINC01549A6NIU2 ZDHHC20P2-201ENST00000424108 429 ntBASIC0.47□□□□□ -2.33
LINC01549A6NIU2 GNGT1-203ENST00000429473 538 ntAPPRIS P1 TSL 1 (best) BASIC0.47□□□□□ -2.33
LINC01549A6NIU2 AC245517.4-201ENST00000448601 281 ntBASIC0.47□□□□□ -2.33
LINC01549A6NIU2 AC112496.1-201ENST00000497961 562 ntTSL 5 BASIC0.47□□□□□ -2.33
LINC01549A6NIU2 LINC02377-201ENST00000500169 450 ntTSL 3 BASIC0.47□□□□□ -2.33
LINC01549A6NIU2 IGKV2D-36-201ENST00000518643 226 ntBASIC0.47□□□□□ -2.33
LINC01549A6NIU2 AC034114.1-201ENST00000520293 285 ntBASIC0.47□□□□□ -2.33
LINC01549A6NIU2 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC0.47□□□□□ -2.33
LINC01549A6NIU2 AL133330.2-201ENST00000532760 776 ntTSL 2 BASIC0.47□□□□□ -2.33
LINC01549A6NIU2 AC093012.1-203ENST00000548437 450 ntTSL 2 BASIC0.47□□□□□ -2.33
LINC01549A6NIU2 ITFG1-AS1-202ENST00000565694 494 ntTSL 2 BASIC0.47□□□□□ -2.33
LINC01549A6NIU2 AP001004.1-201ENST00000582468 324 ntBASIC0.47□□□□□ -2.33
LINC01549A6NIU2 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC0.47□□□□□ -2.33
LINC01549A6NIU2 AL590095.2-201ENST00000604136 117 ntBASIC0.47□□□□□ -2.33
LINC01549A6NIU2 AC013553.2-201ENST00000604244 589 ntBASIC0.47□□□□□ -2.33
LINC01549A6NIU2 AC025811.1-201ENST00000604312 472 ntBASIC0.47□□□□□ -2.33
LINC01549A6NIU2 AL021997.1-201ENST00000605757 193 ntBASIC0.47□□□□□ -2.33
LINC01549A6NIU2 AC004492.1-201ENST00000607036 742 ntBASIC0.47□□□□□ -2.33
LINC01549A6NIU2 AC104763.3-201ENST00000613765 618 ntBASIC0.47□□□□□ -2.33
LINC01549A6NIU2 MIR6852-201ENST00000621699 66 ntBASIC0.47□□□□□ -2.33
LINC01549A6NIU2 ZNF883-201ENST00000619044 2051 ntAPPRIS P1 TSL 5 BASIC0.47□□□□□ -2.33
LINC01549A6NIU2 RNU1-36P-201ENST00000365130 165 ntBASIC0.46□□□□□ -2.34
LINC01549A6NIU2 MIR518A2-201ENST00000384966 87 ntBASIC0.46□□□□□ -2.34
LINC01549A6NIU2 LINC00427-201ENST00000412722 430 ntTSL 2 BASIC0.46□□□□□ -2.34
LINC01549A6NIU2 AC009310.1-201ENST00000414414 451 ntBASIC0.46□□□□□ -2.34
LINC01549A6NIU2 POLR2J4-204ENST00000418424 324 ntBASIC0.46□□□□□ -2.34
LINC01549A6NIU2 ERMN-209ENST00000420719 1246 ntTSL 2 BASIC0.46□□□□□ -2.34
LINC01549A6NIU2 OFD1P12Y-201ENST00000427963 1207 ntBASIC0.46□□□□□ -2.34
LINC01549A6NIU2 AL160175.1-201ENST00000428124 247 ntBASIC0.46□□□□□ -2.34
LINC01549A6NIU2 AC073326.1-201ENST00000451832 557 ntTSL 3 BASIC0.46□□□□□ -2.34
LINC01549A6NIU2 RPS20P22-201ENST00000473700 357 ntBASIC0.46□□□□□ -2.34
LINC01549A6NIU2 AC095056.1-201ENST00000503918 425 ntTSL 3 BASIC0.46□□□□□ -2.34
LINC01549A6NIU2 AC011405.1-201ENST00000514207 248 ntTSL 3 BASIC0.46□□□□□ -2.34
LINC01549A6NIU2 ACA64.5-201ENST00000516207 127 ntBASIC0.46□□□□□ -2.34
LINC01549A6NIU2 RNA5SP404-201ENST00000517118 132 ntBASIC0.46□□□□□ -2.34
LINC01549A6NIU2 AP000916.1-201ENST00000533869 835 ntBASIC0.46□□□□□ -2.34
LINC01549A6NIU2 MED28P6-201ENST00000558776 231 ntBASIC0.46□□□□□ -2.34
LINC01549A6NIU2 LINC01584-203ENST00000567231 646 ntTSL 5 BASIC0.46□□□□□ -2.34
LINC01549A6NIU2 AC012435.1-202ENST00000568772 240 ntBASIC0.46□□□□□ -2.34
LINC01549A6NIU2 ANKRD36BP2-206ENST00000575193 1245 ntBASIC0.46□□□□□ -2.34
LINC01549A6NIU2 MIR4698-201ENST00000577795 80 ntBASIC0.46□□□□□ -2.34
LINC01549A6NIU2 AL031274.2-201ENST00000599419 203 ntBASIC0.46□□□□□ -2.34
LINC01549A6NIU2 AL158827.2-201ENST00000602494 330 ntBASIC0.46□□□□□ -2.34
LINC01549A6NIU2 DPRXP5-201ENST00000604662 539 ntBASIC0.46□□□□□ -2.34
LINC01549A6NIU2 AC211469.2-201ENST00000605461 205 ntBASIC0.46□□□□□ -2.34
LINC01549A6NIU2 AC110792.4-201ENST00000609843 298 ntBASIC0.46□□□□□ -2.34
LINC01549A6NIU2 AL691447.3-201ENST00000635020 330 ntBASIC0.46□□□□□ -2.34
LINC01549A6NIU2 RNU6-661P-201ENST00000362409 107 ntBASIC0.45□□□□□ -2.34
LINC01549A6NIU2 SNORA40.19-201ENST00000390846 128 ntBASIC0.45□□□□□ -2.34
LINC01549A6NIU2 AL365400.1-201ENST00000431854 640 ntBASIC0.45□□□□□ -2.34
LINC01549A6NIU2 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC0.45□□□□□ -2.34
LINC01549A6NIU2 RPL23AP23-201ENST00000452590 471 ntBASIC0.45□□□□□ -2.34
LINC01549A6NIU2 AL353780.1-201ENST00000455583 458 ntTSL 2 BASIC0.45□□□□□ -2.34
LINC01549A6NIU2 RPL30P7-201ENST00000479312 323 ntBASIC0.45□□□□□ -2.34
LINC01549A6NIU2 PGRMC2-203ENST00000503588 818 ntTSL 4 BASIC0.45□□□□□ -2.34
LINC01549A6NIU2 GYPA-204ENST00000504786 357 ntTSL 1 (best) BASIC0.45□□□□□ -2.34
LINC01549A6NIU2 AC016687.2-203ENST00000506650 578 ntTSL 3 BASIC0.45□□□□□ -2.34
LINC01549A6NIU2 RNU6ATAC13P-201ENST00000516152 131 ntBASIC0.45□□□□□ -2.34
LINC01549A6NIU2 SCARNA3-201ENST00000517097 143 ntBASIC0.45□□□□□ -2.34
LINC01549A6NIU2 MIR100HG-213ENST00000531470 560 ntTSL 4 BASIC0.45□□□□□ -2.34
LINC01549A6NIU2 AC068135.2-201ENST00000569293 1028 ntBASIC0.45□□□□□ -2.34
LINC01549A6NIU2 uc_338.17-201ENST00000619633 179 ntBASIC0.45□□□□□ -2.34
LINC01549A6NIU2 TLR6-205ENST00000610323 1443 ntTSL 5 BASIC0.45□□□□□ -2.34
LINC01549A6NIU2 FKTN-204ENST00000448551 1700 ntTSL 2 BASIC0.44□□□□□ -2.34
LINC01549A6NIU2 DYNAP-201ENST00000321600 2027 ntAPPRIS P3 TSL 2 BASIC0.44□□□□□ -2.34
LINC01549A6NIU2 AL391987.6-201ENST00000305671 199 ntBASIC0.44□□□□□ -2.34
LINC01549A6NIU2 IL36B-202ENST00000327407 1052 ntAPPRIS P1 TSL 1 (best) BASIC0.44□□□□□ -2.34
LINC01549A6NIU2 RNU1-17P-201ENST00000363022 152 ntBASIC0.44□□□□□ -2.34
Retrieved 100 of 98,524 protein–RNA pairs in 109.3 ms