Protein–RNA interactions for Protein: A6NFN3

RBFOX3, RNA binding protein fox-1 homolog 3, humanhuman

Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX3A6NFN3 MRPL30-202ENST00000409145 562 ntTSL 2 BASIC1.79□□□□□ -2.12
RBFOX3A6NFN3 RNA5SP338-201ENST00000410495 85 ntBASIC1.79□□□□□ -2.12
RBFOX3A6NFN3 AC069282.1-201ENST00000411911 526 ntBASIC1.79□□□□□ -2.12
RBFOX3A6NFN3 LINC01934-201ENST00000414750 391 ntTSL 3 BASIC1.79□□□□□ -2.12
RBFOX3A6NFN3 AC019070.1-201ENST00000415008 1024 ntBASIC1.79□□□□□ -2.12
RBFOX3A6NFN3 AC005062.1-204ENST00000415499 743 ntTSL 3 BASIC1.79□□□□□ -2.12
RBFOX3A6NFN3 AL161909.2-201ENST00000417577 409 ntTSL 5 BASIC1.79□□□□□ -2.12
RBFOX3A6NFN3 ERMN-209ENST00000420719 1246 ntTSL 2 BASIC1.79□□□□□ -2.12
RBFOX3A6NFN3 AC019097.1-201ENST00000424783 735 ntBASIC1.79□□□□□ -2.12
RBFOX3A6NFN3 AC016691.1-201ENST00000441321 413 ntBASIC1.79□□□□□ -2.12
RBFOX3A6NFN3 NAALADL2-AS3-202ENST00000453180 413 ntTSL 3 BASIC1.79□□□□□ -2.12
RBFOX3A6NFN3 AC025033.1-201ENST00000463883 194 ntBASIC1.79□□□□□ -2.12
RBFOX3A6NFN3 AC090515.1-201ENST00000465295 476 ntBASIC1.79□□□□□ -2.12
RBFOX3A6NFN3 RN7SL432P-201ENST00000484057 298 ntBASIC1.79□□□□□ -2.12
RBFOX3A6NFN3 PDC-202ENST00000497198 1174 ntTSL 1 (best) BASIC1.79□□□□□ -2.12
RBFOX3A6NFN3 RNA5SP165-201ENST00000517142 115 ntBASIC1.79□□□□□ -2.12
RBFOX3A6NFN3 AC090802.1-201ENST00000520870 445 ntTSL 2 BASIC1.79□□□□□ -2.12
RBFOX3A6NFN3 NARSP2-202ENST00000522022 349 ntTSL 3 BASIC1.79□□□□□ -2.12
RBFOX3A6NFN3 AP001189.6-201ENST00000528781 831 ntTSL 1 (best) BASIC1.79□□□□□ -2.12
RBFOX3A6NFN3 CCDC7-207ENST00000535327 700 ntAPPRIS ALT2 TSL 1 (best) BASIC1.79□□□□□ -2.12
RBFOX3A6NFN3 LINC02384-205ENST00000539404 785 ntTSL 3 BASIC1.79□□□□□ -2.12
RBFOX3A6NFN3 AC021739.1-201ENST00000559631 174 ntBASIC1.79□□□□□ -2.12
RBFOX3A6NFN3 AC105245.1-201ENST00000581934 244 ntBASIC1.79□□□□□ -2.12
RBFOX3A6NFN3 AP005057.1-201ENST00000583827 574 ntTSL 4 BASIC1.79□□□□□ -2.12
RBFOX3A6NFN3 MIR4448-201ENST00000584360 86 ntBASIC1.79□□□□□ -2.12
RBFOX3A6NFN3 LINC01470-205ENST00000584829 681 ntTSL 3 BASIC1.79□□□□□ -2.12
RBFOX3A6NFN3 AC002984.1-201ENST00000591692 448 ntBASIC1.79□□□□□ -2.12
RBFOX3A6NFN3 BX546450.2-201ENST00000602419 435 ntTSL 5 BASIC1.79□□□□□ -2.12
RBFOX3A6NFN3 APOOP1-201ENST00000604695 592 ntBASIC1.79□□□□□ -2.12
RBFOX3A6NFN3 AC110609.1-201ENST00000608228 303 ntTSL 3 BASIC1.79□□□□□ -2.12
RBFOX3A6NFN3 DUSP12P1-201ENST00000612874 516 ntBASIC1.79□□□□□ -2.12
RBFOX3A6NFN3 C3orf49-203ENST00000616659 876 ntAPPRIS ALT2 TSL 5 BASIC1.79□□□□□ -2.12
RBFOX3A6NFN3 AL121895.2-201ENST00000619558 447 ntBASIC1.79□□□□□ -2.12
RBFOX3A6NFN3 PHTF2-202ENST00000275575 4541 ntTSL 1 (best) BASIC1.79□□□□□ -2.12
RBFOX3A6NFN3 TRIQK-201ENST00000378861 1596 ntAPPRIS P1 TSL 1 (best) BASIC1.79□□□□□ -2.12
RBFOX3A6NFN3 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC1.79□□□□□ -2.12
RBFOX3A6NFN3 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC1.79□□□□□ -2.12
RBFOX3A6NFN3 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC1.79□□□□□ -2.12
RBFOX3A6NFN3 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC1.78□□□□□ -2.12
RBFOX3A6NFN3 HSFY2-201ENST00000304790 1444 ntAPPRIS P5 TSL 1 (best) BASIC1.78□□□□□ -2.12
RBFOX3A6NFN3 HSFY1-201ENST00000307393 1444 ntAPPRIS P5 TSL 1 (best) BASIC1.78□□□□□ -2.12
RBFOX3A6NFN3 MT-ND4L-201ENST00000361335 297 ntAPPRIS P1 BASIC1.78□□□□□ -2.12
RBFOX3A6NFN3 Y_RNA.311-201ENST00000365068 96 ntBASIC1.78□□□□□ -2.12
RBFOX3A6NFN3 MEIG1-201ENST00000378240 507 ntAPPRIS P1 TSL 2 BASIC1.78□□□□□ -2.12
RBFOX3A6NFN3 RNU2-68P-201ENST00000410878 191 ntBASIC1.78□□□□□ -2.12
RBFOX3A6NFN3 AL109914.1-201ENST00000414740 146 ntTSL 5 BASIC1.78□□□□□ -2.12
RBFOX3A6NFN3 RPS3AP44-201ENST00000425466 790 ntBASIC1.78□□□□□ -2.12
RBFOX3A6NFN3 AC064852.1-201ENST00000427571 851 ntTSL 3 BASIC1.78□□□□□ -2.12
RBFOX3A6NFN3 AC244035.1-201ENST00000430042 390 ntBASIC1.78□□□□□ -2.12
RBFOX3A6NFN3 AC017048.2-201ENST00000431455 822 ntTSL 3 BASIC1.78□□□□□ -2.12
RBFOX3A6NFN3 LINC01626-201ENST00000431997 452 ntTSL 3 BASIC1.78□□□□□ -2.12
RBFOX3A6NFN3 KCNJ6-AS1-201ENST00000435001 357 ntTSL 5 BASIC1.78□□□□□ -2.12
RBFOX3A6NFN3 RPS15AP28-201ENST00000435088 386 ntBASIC1.78□□□□□ -2.12
RBFOX3A6NFN3 AL117336.1-201ENST00000439198 380 ntTSL 2 BASIC1.78□□□□□ -2.12
RBFOX3A6NFN3 AC018693.1-201ENST00000442829 550 ntTSL 4 BASIC1.78□□□□□ -2.12
RBFOX3A6NFN3 AP000477.2-201ENST00000447405 778 ntTSL 3 BASIC1.78□□□□□ -2.12
RBFOX3A6NFN3 RPL23AP7-203ENST00000449021 469 ntBASIC1.78□□□□□ -2.12
RBFOX3A6NFN3 AL021397.1-201ENST00000451806 248 ntBASIC1.78□□□□□ -2.12
RBFOX3A6NFN3 AL359095.1-201ENST00000457383 635 ntTSL 3 BASIC1.78□□□□□ -2.12
RBFOX3A6NFN3 AL390961.3-201ENST00000458171 485 ntTSL 5 BASIC1.78□□□□□ -2.12
RBFOX3A6NFN3 LINC02046-202ENST00000481334 390 ntTSL 3 BASIC1.78□□□□□ -2.12
RBFOX3A6NFN3 LEKR1-206ENST00000483177 546 ntTSL 3 BASIC1.78□□□□□ -2.12
RBFOX3A6NFN3 RPS27P21-201ENST00000486977 252 ntBASIC1.78□□□□□ -2.12
RBFOX3A6NFN3 LINC02428-201ENST00000508099 527 ntTSL 5 BASIC1.78□□□□□ -2.12
RBFOX3A6NFN3 AC026436.1-201ENST00000510537 270 ntBASIC1.78□□□□□ -2.12
RBFOX3A6NFN3 AC006199.1-201ENST00000548728 219 ntBASIC1.78□□□□□ -2.12
RBFOX3A6NFN3 AL133241.1-201ENST00000556832 487 ntBASIC1.78□□□□□ -2.12
RBFOX3A6NFN3 AC078909.1-201ENST00000559509 464 ntTSL 2 BASIC1.78□□□□□ -2.12
RBFOX3A6NFN3 AC012146.1-204ENST00000570712 426 ntTSL 3 BASIC1.78□□□□□ -2.12
RBFOX3A6NFN3 MIR4319-201ENST00000577285 85 ntBASIC1.78□□□□□ -2.12
RBFOX3A6NFN3 AC044840.1-201ENST00000577641 472 ntTSL 3 BASIC1.78□□□□□ -2.12
RBFOX3A6NFN3 AC021171.1-201ENST00000603137 706 ntBASIC1.78□□□□□ -2.12
RBFOX3A6NFN3 THRA1/BTR-203ENST00000604191 571 ntTSL 4 BASIC1.78□□□□□ -2.12
RBFOX3A6NFN3 AC091152.3-201ENST00000604227 325 ntBASIC1.78□□□□□ -2.12
RBFOX3A6NFN3 AL161798.1-201ENST00000604630 131 ntBASIC1.78□□□□□ -2.12
RBFOX3A6NFN3 AC024581.2-201ENST00000619986 252 ntBASIC1.78□□□□□ -2.12
RBFOX3A6NFN3 AC098657.3-201ENST00000620434 263 ntBASIC1.78□□□□□ -2.12
RBFOX3A6NFN3 MIR6852-201ENST00000621699 66 ntBASIC1.78□□□□□ -2.12
RBFOX3A6NFN3 MIR6766-201ENST00000622641 72 ntBASIC1.78□□□□□ -2.12
RBFOX3A6NFN3 AL031601.2-202ENST00000622650 282 ntBASIC1.78□□□□□ -2.12
RBFOX3A6NFN3 LINC02211-204ENST00000642024 1070 ntBASIC1.78□□□□□ -2.12
RBFOX3A6NFN3 CASC1-205ENST00000545133 2146 ntAPPRIS ALT2 TSL 2 BASIC1.78□□□□□ -2.13
RBFOX3A6NFN3 AMY2B-208ENST00000610648 1736 ntAPPRIS P1 TSL 1 (best) BASIC1.77□□□□□ -2.13
RBFOX3A6NFN3 AC016717.2-201ENST00000609089 5141 ntBASIC1.77□□□□□ -2.13
RBFOX3A6NFN3 RNU6-289P-201ENST00000364093 107 ntBASIC1.77□□□□□ -2.13
RBFOX3A6NFN3 Y_RNA.500-201ENST00000384466 111 ntBASIC1.77□□□□□ -2.13
RBFOX3A6NFN3 NPM1P11-201ENST00000417106 855 ntBASIC1.77□□□□□ -2.13
RBFOX3A6NFN3 BTF3L4P3-201ENST00000418879 476 ntBASIC1.77□□□□□ -2.13
RBFOX3A6NFN3 AL356277.2-201ENST00000421318 441 ntTSL 2 BASIC1.77□□□□□ -2.13
RBFOX3A6NFN3 ABCC5-AS1-201ENST00000422946 469 ntTSL 2 BASIC1.77□□□□□ -2.13
RBFOX3A6NFN3 BX276092.3-201ENST00000424182 230 ntBASIC1.77□□□□□ -2.13
RBFOX3A6NFN3 KRTAP19-11P-201ENST00000439851 104 ntBASIC1.77□□□□□ -2.13
RBFOX3A6NFN3 MTATP6P30-201ENST00000443540 664 ntBASIC1.77□□□□□ -2.13
RBFOX3A6NFN3 AC124916.1-201ENST00000444020 547 ntBASIC1.77□□□□□ -2.13
RBFOX3A6NFN3 AL451164.2-201ENST00000445932 597 ntTSL 2 BASIC1.77□□□□□ -2.13
RBFOX3A6NFN3 SFTA1P-203ENST00000446372 693 ntTSL 1 (best) BASIC1.77□□□□□ -2.13
RBFOX3A6NFN3 FABP5P15-201ENST00000453566 214 ntBASIC1.77□□□□□ -2.13
RBFOX3A6NFN3 IFT74-AS1-201ENST00000456198 405 ntTSL 2 BASIC1.77□□□□□ -2.13
RBFOX3A6NFN3 AC117462.1-201ENST00000461186 554 ntTSL 4 BASIC1.77□□□□□ -2.13
RBFOX3A6NFN3 AC010631.1-201ENST00000474150 156 ntBASIC1.77□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 152 ms