Protein–RNA interactions for Protein: A2A3K4

PTPDC1, Protein tyrosine phosphatase domain-containing protein 1, humanhuman

Predictions only

Length 754 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1A2A3K4 HSPE1P6-201ENST00000479457 291 ntBASIC4.37□□□□□ -1.71
PTPDC1A2A3K4 HMGB1P22-201ENST00000505315 124 ntBASIC4.37□□□□□ -1.71
PTPDC1A2A3K4 AC091906.1-201ENST00000511310 391 ntTSL 2 BASIC4.37□□□□□ -1.71
PTPDC1A2A3K4 Y_RNA.689-201ENST00000516589 107 ntBASIC4.37□□□□□ -1.71
PTPDC1A2A3K4 AC068672.1-201ENST00000520391 328 ntTSL 3 BASIC4.37□□□□□ -1.71
PTPDC1A2A3K4 AC006518.2-202ENST00000544947 297 ntTSL 2 BASIC4.37□□□□□ -1.71
PTPDC1A2A3K4 AC026464.5-201ENST00000562497 722 ntBASIC4.37□□□□□ -1.71
PTPDC1A2A3K4 AC005951.2-201ENST00000576282 495 ntBASIC4.37□□□□□ -1.71
PTPDC1A2A3K4 AL158032.1-201ENST00000605401 106 ntBASIC4.37□□□□□ -1.71
PTPDC1A2A3K4 MTND5P42-201ENST00000637720 498 ntBASIC4.37□□□□□ -1.71
PTPDC1A2A3K4 AC079160.1-202ENST00000508406 2795 ntTSL 5 BASIC4.37□□□□□ -1.71
PTPDC1A2A3K4 C6orf10-203ENST00000442822 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC4.37□□□□□ -1.71
PTPDC1A2A3K4 PLCZ1-209ENST00000539875 1398 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
PTPDC1A2A3K4 NLGN1-206ENST00000457714 8242 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
PTPDC1A2A3K4 TLR8-202ENST00000311912 3367 ntAPPRIS P4 TSL 1 (best) BASIC4.36□□□□□ -1.71
PTPDC1A2A3K4 SDAD1P2-201ENST00000441308 2028 ntBASIC4.36□□□□□ -1.71
PTPDC1A2A3K4 PNPT1P2-201ENST00000456768 2050 ntBASIC4.36□□□□□ -1.71
PTPDC1A2A3K4 ADAM29-211ENST00000514159 3010 ntAPPRIS P1 TSL 4 BASIC4.36□□□□□ -1.71
PTPDC1A2A3K4 SKIL-201ENST00000259119 3057 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
PTPDC1A2A3K4 FAM71D-211ENST00000612183 1790 ntAPPRIS P1 TSL 2 BASIC4.36□□□□□ -1.71
PTPDC1A2A3K4 RNU6-817P-201ENST00000391083 104 ntBASIC4.36□□□□□ -1.71
PTPDC1A2A3K4 AL022329.2-201ENST00000413494 660 ntTSL 5 BASIC4.36□□□□□ -1.71
PTPDC1A2A3K4 EI24P1-201ENST00000416584 867 ntBASIC4.36□□□□□ -1.71
PTPDC1A2A3K4 AL035423.1-201ENST00000420331 213 ntBASIC4.36□□□□□ -1.71
PTPDC1A2A3K4 YME1L1P1-201ENST00000429435 297 ntBASIC4.36□□□□□ -1.71
PTPDC1A2A3K4 KRR1-202ENST00000438169 975 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
PTPDC1A2A3K4 LINC01698-201ENST00000443636 727 ntTSL 3 BASIC4.36□□□□□ -1.71
PTPDC1A2A3K4 AC007099.2-201ENST00000444852 336 ntTSL 5 BASIC4.36□□□□□ -1.71
PTPDC1A2A3K4 PRPS1P1-201ENST00000445305 876 ntBASIC4.36□□□□□ -1.71
PTPDC1A2A3K4 RPS24P6-201ENST00000452670 400 ntBASIC4.36□□□□□ -1.71
PTPDC1A2A3K4 SCARNA18-201ENST00000459004 134 ntBASIC4.36□□□□□ -1.71
PTPDC1A2A3K4 RNU6-953P-201ENST00000459154 107 ntBASIC4.36□□□□□ -1.71
PTPDC1A2A3K4 S100A11P1-201ENST00000477525 312 ntBASIC4.36□□□□□ -1.71
PTPDC1A2A3K4 AC083904.1-201ENST00000487828 231 ntBASIC4.36□□□□□ -1.71
PTPDC1A2A3K4 LINC02146-201ENST00000504244 509 ntTSL 3 BASIC4.36□□□□□ -1.71
PTPDC1A2A3K4 MTCO3P9-201ENST00000506989 781 ntBASIC4.36□□□□□ -1.71
PTPDC1A2A3K4 RNU6-277P-201ENST00000516272 106 ntBASIC4.36□□□□□ -1.71
PTPDC1A2A3K4 RN7SKP83-201ENST00000516512 178 ntBASIC4.36□□□□□ -1.71
PTPDC1A2A3K4 RNA5SP164-201ENST00000516533 110 ntBASIC4.36□□□□□ -1.71
PTPDC1A2A3K4 Y_RNA.691-201ENST00000516611 103 ntBASIC4.36□□□□□ -1.71
PTPDC1A2A3K4 AC026403.1-201ENST00000518938 295 ntBASIC4.36□□□□□ -1.71
PTPDC1A2A3K4 AC113192.5-201ENST00000528779 486 ntTSL 2 BASIC4.36□□□□□ -1.71
PTPDC1A2A3K4 AC093027.1-201ENST00000546698 429 ntBASIC4.36□□□□□ -1.71
PTPDC1A2A3K4 AL355836.1-201ENST00000555951 870 ntBASIC4.36□□□□□ -1.71
PTPDC1A2A3K4 DPPA3P3-201ENST00000603842 430 ntBASIC4.36□□□□□ -1.71
PTPDC1A2A3K4 AC007390.2-201ENST00000606229 3803 ntBASIC4.36□□□□□ -1.71
PTPDC1A2A3K4 AC104237.2-201ENST00000612456 443 ntBASIC4.36□□□□□ -1.71
PTPDC1A2A3K4 AL360181.4-201ENST00000621752 134 ntBASIC4.36□□□□□ -1.71
PTPDC1A2A3K4 MTND1P37-201ENST00000636562 264 ntBASIC4.36□□□□□ -1.71
PTPDC1A2A3K4 AC099654.10-201ENST00000640395 161 ntBASIC4.36□□□□□ -1.71
PTPDC1A2A3K4 USH2A-201ENST00000307340 18883 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
PTPDC1A2A3K4 WNK3-202ENST00000375159 5403 ntAPPRIS P3 TSL 1 (best) BASIC4.35□□□□□ -1.71
PTPDC1A2A3K4 RNF38-203ENST00000353739 4945 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
PTPDC1A2A3K4 AL161912.2-201ENST00000565707 3007 ntBASIC4.35□□□□□ -1.71
PTPDC1A2A3K4 ATP13A3-203ENST00000439040 7720 ntAPPRIS P1 TSL 5 BASIC4.35□□□□□ -1.71
PTPDC1A2A3K4 ZNF883-201ENST00000619044 2051 ntAPPRIS P1 TSL 5 BASIC4.35□□□□□ -1.71
PTPDC1A2A3K4 Y_RNA.167-201ENST00000363735 109 ntBASIC4.35□□□□□ -1.71
PTPDC1A2A3K4 Y_RNA.184-201ENST00000363884 108 ntBASIC4.35□□□□□ -1.71
PTPDC1A2A3K4 Y_RNA.414-201ENST00000384011 101 ntBASIC4.35□□□□□ -1.71
PTPDC1A2A3K4 Y_RNA.460-201ENST00000384255 102 ntBASIC4.35□□□□□ -1.71
PTPDC1A2A3K4 RNU6-1127P-201ENST00000384580 107 ntBASIC4.35□□□□□ -1.71
PTPDC1A2A3K4 RNA5SP424-201ENST00000390988 115 ntBASIC4.35□□□□□ -1.71
PTPDC1A2A3K4 RNA5SP111-201ENST00000411386 101 ntBASIC4.35□□□□□ -1.71
PTPDC1A2A3K4 OFD1P1Y-201ENST00000411756 1225 ntBASIC4.35□□□□□ -1.71
PTPDC1A2A3K4 AL078601.2-201ENST00000429444 474 ntTSL 2 BASIC4.35□□□□□ -1.71
PTPDC1A2A3K4 HMGN2P21-201ENST00000447764 270 ntBASIC4.35□□□□□ -1.71
PTPDC1A2A3K4 AC104058.1-201ENST00000448028 297 ntBASIC4.35□□□□□ -1.71
PTPDC1A2A3K4 AC007557.1-201ENST00000451711 541 ntTSL 2 BASIC4.35□□□□□ -1.71
PTPDC1A2A3K4 snoU13.24-201ENST00000458998 104 ntBASIC4.35□□□□□ -1.71
PTPDC1A2A3K4 AC108860.1-201ENST00000484521 383 ntBASIC4.35□□□□□ -1.71
PTPDC1A2A3K4 MFAP3L-206ENST00000506110 548 ntTSL 3 BASIC4.35□□□□□ -1.71
PTPDC1A2A3K4 AC009435.1-201ENST00000519555 574 ntTSL 4 BASIC4.35□□□□□ -1.71
PTPDC1A2A3K4 AP001783.1-202ENST00000534620 408 ntTSL 2 BASIC4.35□□□□□ -1.71
PTPDC1A2A3K4 AC008083.3-202ENST00000552063 277 ntTSL 3 BASIC4.35□□□□□ -1.71
PTPDC1A2A3K4 OR11H5P-201ENST00000554039 926 ntBASIC4.35□□□□□ -1.71
PTPDC1A2A3K4 IGKV2OR2-8-201ENST00000558710 300 ntBASIC4.35□□□□□ -1.71
PTPDC1A2A3K4 AC009137.1-201ENST00000562790 260 ntTSL 3 BASIC4.35□□□□□ -1.71
PTPDC1A2A3K4 AL355375.2-201ENST00000574825 175 ntBASIC4.35□□□□□ -1.71
PTPDC1A2A3K4 MIR5187-201ENST00000583479 76 ntBASIC4.35□□□□□ -1.71
PTPDC1A2A3K4 BNIP3P25-201ENST00000596023 559 ntBASIC4.35□□□□□ -1.71
PTPDC1A2A3K4 AC244505.7-201ENST00000599675 272 ntBASIC4.35□□□□□ -1.71
PTPDC1A2A3K4 AC009570.1-201ENST00000609599 745 ntBASIC4.35□□□□□ -1.71
PTPDC1A2A3K4 AC135507.2-201ENST00000612443 309 ntBASIC4.35□□□□□ -1.71
PTPDC1A2A3K4 AC092442.1-201ENST00000636216 138 ntAPPRIS P1 TSL 5 BASIC4.35□□□□□ -1.71
PTPDC1A2A3K4 MIR1302-1-201ENST00000637932 143 ntBASIC4.35□□□□□ -1.71
PTPDC1A2A3K4 CCNYL2-203ENST00000638057 730 ntTSL 3 BASIC4.35□□□□□ -1.71
PTPDC1A2A3K4 AC009093.8-201ENST00000641769 292 ntBASIC4.35□□□□□ -1.71
PTPDC1A2A3K4 RPS4XP5-202ENST00000449995 1334 ntBASIC4.35□□□□□ -1.71
PTPDC1A2A3K4 SLITRK4-203ENST00000596188 8545 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
PTPDC1A2A3K4 ZSCAN26-204ENST00000614088 2321 ntTSL 3 BASIC4.35□□□□□ -1.71
PTPDC1A2A3K4 BIRC3-201ENST00000263464 5197 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
PTPDC1A2A3K4 IGSF11-AS1-201ENST00000477009 1604 ntTSL 2 BASIC4.35□□□□□ -1.71
PTPDC1A2A3K4 NR3C1-202ENST00000343796 7286 ntAPPRIS P3 TSL 5 BASIC4.35□□□□□ -1.71
PTPDC1A2A3K4 TNNI3K-201ENST00000326637 3001 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
PTPDC1A2A3K4 AC106871.1-201ENST00000568324 3102 ntBASIC4.35□□□□□ -1.71
PTPDC1A2A3K4 RNMT-206ENST00000589866 1879 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
PTPDC1A2A3K4 ZNF439-201ENST00000304030 2622 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
PTPDC1A2A3K4 MS4A1-212ENST00000534668 3475 ntAPPRIS P1 TSL 2 BASIC4.34□□□□□ -1.71
PTPDC1A2A3K4 GSTA3-201ENST00000211122 902 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
PTPDC1A2A3K4 RNU5A-1-201ENST00000362698 116 ntBASIC4.34□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 115.4 ms