Protein–RNA interactions for Protein: U3KQE9

Uncharacterized protein (Fragment), humanhuman

Predictions only

Length 123 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
U3KQE9 GPALPP1-201ENST00000357537 5368 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
U3KQE9 PARP11-201ENST00000228820 4424 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
U3KQE9 SEL1L2-201ENST00000284951 2224 ntAPPRIS P1 TSL 5 BASIC4.08□□□□□ -1.76
U3KQE9 DYNC1I2-201ENST00000340296 2589 ntAPPRIS P4 TSL 1 (best) BASIC4.08□□□□□ -1.76
U3KQE9 RNA5SP197-201ENST00000363357 119 ntBASIC4.08□□□□□ -1.76
U3KQE9 RNA5SP510-201ENST00000364697 99 ntBASIC4.08□□□□□ -1.76
U3KQE9 Y_RNA.286-201ENST00000364813 102 ntBASIC4.08□□□□□ -1.76
U3KQE9 ADAM18-202ENST00000379866 2314 ntAPPRIS ALT2 TSL 1 (best) BASIC4.08□□□□□ -1.76
U3KQE9 MIR621-201ENST00000384919 96 ntBASIC4.08□□□□□ -1.76
U3KQE9 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
U3KQE9 RN7SKP51-201ENST00000410781 304 ntBASIC4.08□□□□□ -1.76
U3KQE9 RNU6-1135P-201ENST00000411083 103 ntBASIC4.08□□□□□ -1.76
U3KQE9 TMEM68-202ENST00000434581 2549 ntAPPRIS P1 TSL 5 BASIC4.08□□□□□ -1.76
U3KQE9 AC004837.2-201ENST00000435766 731 ntTSL 3 BASIC4.08□□□□□ -1.76
U3KQE9 RPL36AP39-201ENST00000445859 318 ntBASIC4.08□□□□□ -1.76
U3KQE9 AL589765.3-201ENST00000446084 462 ntBASIC4.08□□□□□ -1.76
U3KQE9 NUTF2P3-201ENST00000448540 384 ntBASIC4.08□□□□□ -1.76
U3KQE9 RPL26P26-201ENST00000480251 434 ntBASIC4.08□□□□□ -1.76
U3KQE9 AL132838.2-201ENST00000492041 314 ntBASIC4.08□□□□□ -1.76
U3KQE9 MRPS33-209ENST00000496958 688 ntAPPRIS P1 TSL 3 BASIC4.08□□□□□ -1.76
U3KQE9 RNU6-572P-201ENST00000516724 80 ntBASIC4.08□□□□□ -1.76
U3KQE9 RN7SKP272-201ENST00000516988 232 ntBASIC4.08□□□□□ -1.76
U3KQE9 RNA5SP230-201ENST00000517039 122 ntBASIC4.08□□□□□ -1.76
U3KQE9 SMG1P4-204ENST00000523028 4131 ntBASIC4.08□□□□□ -1.76
U3KQE9 AL132819.1-201ENST00000555595 208 ntTSL 3 BASIC4.08□□□□□ -1.76
U3KQE9 LINC01584-202ENST00000563990 852 ntTSL 3 BASIC4.08□□□□□ -1.76
U3KQE9 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC4.08□□□□□ -1.76
U3KQE9 AC022154.1-203ENST00000594850 493 ntTSL 3 BASIC4.08□□□□□ -1.76
U3KQE9 ADAM29-213ENST00000615367 3386 ntAPPRIS P1 TSL 5 BASIC4.08□□□□□ -1.76
U3KQE9 CLUL1-213ENST00000620089 1947 ntTSL 5 BASIC4.08□□□□□ -1.76
U3KQE9 AL365265.1-201ENST00000621045 234 ntBASIC4.08□□□□□ -1.76
U3KQE9 AC127024.6-201ENST00000621598 424 ntBASIC4.08□□□□□ -1.76
U3KQE9 DENND4A-201ENST00000431932 5875 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
U3KQE9 ZNF678-201ENST00000343776 8556 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
U3KQE9 PRUNE2-207ENST00000428286 12437 ntTSL 5 BASIC4.08□□□□□ -1.76
U3KQE9 PTPN13-202ENST00000411767 8119 ntAPPRIS ALT2 TSL 1 (best) BASIC4.08□□□□□ -1.76
U3KQE9 OR56A4-202ENST00000641156 3768 ntAPPRIS P1 BASIC4.08□□□□□ -1.76
U3KQE9 PIGN-241ENST00000640050 3154 ntAPPRIS P1 TSL 5 BASIC4.08□□□□□ -1.76
U3KQE9 OR8A1-203ENST00000641670 5709 ntAPPRIS P1 BASIC4.08□□□□□ -1.76
U3KQE9 NCOA7-202ENST00000368357 5521 ntAPPRIS P3 TSL 1 (best) BASIC4.08□□□□□ -1.76
U3KQE9 AP002512.4-201ENST00000641310 4672 ntAPPRIS P1 BASIC4.07□□□□□ -1.76
U3KQE9 AC093535.2-201ENST00000624769 2326 ntBASIC4.07□□□□□ -1.76
U3KQE9 SMAD4-202ENST00000398417 8495 ntAPPRIS P1 TSL 5 BASIC4.07□□□□□ -1.76
U3KQE9 ZNF534-202ENST00000332323 2086 ntAPPRIS P4 TSL 1 (best) BASIC4.07□□□□□ -1.76
U3KQE9 CFAP70-201ENST00000310715 3703 ntAPPRIS P1 TSL 5 BASIC4.07□□□□□ -1.76
U3KQE9 DTNA-208ENST00000554864 1680 ntAPPRIS ALT2 TSL 1 (best) BASIC4.07□□□□□ -1.76
U3KQE9 NAV2-AS5-201ENST00000528726 3307 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
U3KQE9 AASDH-202ENST00000451613 3182 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
U3KQE9 PATL1-201ENST00000300146 4072 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
U3KQE9 ZBTB38-220ENST00000514251 7683 ntAPPRIS P1 TSL 2 BASIC4.07□□□□□ -1.76
U3KQE9 MIR133B-201ENST00000362210 119 ntBASIC4.07□□□□□ -1.76
U3KQE9 RNA5SP319-201ENST00000362768 119 ntBASIC4.07□□□□□ -1.76
U3KQE9 RNA5SP234-201ENST00000363916 119 ntBASIC4.07□□□□□ -1.76
U3KQE9 Y_RNA.343-201ENST00000365354 112 ntBASIC4.07□□□□□ -1.76
U3KQE9 RNU6-926P-201ENST00000384075 107 ntBASIC4.07□□□□□ -1.76
U3KQE9 RNU6-1289P-201ENST00000384431 106 ntBASIC4.07□□□□□ -1.76
U3KQE9 RNU6-417P-201ENST00000384712 107 ntBASIC4.07□□□□□ -1.76
U3KQE9 SNORA40.19-201ENST00000390846 128 ntBASIC4.07□□□□□ -1.76
U3KQE9 RNA5SP487-201ENST00000410186 122 ntBASIC4.07□□□□□ -1.76
U3KQE9 RNU4-30P-201ENST00000410245 143 ntBASIC4.07□□□□□ -1.76
U3KQE9 CYP4F29P-201ENST00000420685 446 ntBASIC4.07□□□□□ -1.76
U3KQE9 AL592078.1-201ENST00000421866 321 ntTSL 3 BASIC4.07□□□□□ -1.76
U3KQE9 RPL27AP8-201ENST00000424277 446 ntBASIC4.07□□□□□ -1.76
U3KQE9 AF064858.2-201ENST00000440714 292 ntTSL 3 BASIC4.07□□□□□ -1.76
U3KQE9 AL592431.1-201ENST00000451090 317 ntTSL 3 BASIC4.07□□□□□ -1.76
U3KQE9 AL136164.1-201ENST00000456795 352 ntTSL 3 BASIC4.07□□□□□ -1.76
U3KQE9 AC098851.1-201ENST00000476561 570 ntTSL 4 BASIC4.07□□□□□ -1.76
U3KQE9 RN7SL814P-201ENST00000487715 300 ntBASIC4.07□□□□□ -1.76
U3KQE9 AC139453.3-201ENST00000493276 369 ntBASIC4.07□□□□□ -1.76
U3KQE9 AC107391.1-201ENST00000514966 412 ntTSL 2 BASIC4.07□□□□□ -1.76
U3KQE9 RNU6-1198P-201ENST00000516904 67 ntBASIC4.07□□□□□ -1.76
U3KQE9 AC103855.1-201ENST00000525926 564 ntTSL 2 BASIC4.07□□□□□ -1.76
U3KQE9 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC4.07□□□□□ -1.76
U3KQE9 MIR5692C2-201ENST00000577959 77 ntBASIC4.07□□□□□ -1.76
U3KQE9 MIR4782-201ENST00000577987 79 ntBASIC4.07□□□□□ -1.76
U3KQE9 ARL2BPP3-202ENST00000580773 420 ntTSL 5 BASIC4.07□□□□□ -1.76
U3KQE9 AC099669.2-201ENST00000616549 437 ntBASIC4.07□□□□□ -1.76
U3KQE9 Metazoa_SRP.130-201ENST00000622625 267 ntBASIC4.07□□□□□ -1.76
U3KQE9 Z95331.1-201ENST00000623075 23112 ntBASIC4.07□□□□□ -1.76
U3KQE9 PDE7A-201ENST00000379419 2425 ntAPPRIS P3 TSL 2 BASIC4.07□□□□□ -1.76
U3KQE9 AC016687.3-202ENST00000505018 2404 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
U3KQE9 ZNF677-201ENST00000333952 3422 ntAPPRIS P1 TSL 2 BASIC4.07□□□□□ -1.76
U3KQE9 AC090740.1-201ENST00000623193 2262 ntBASIC4.07□□□□□ -1.76
U3KQE9 AL034549.2-201ENST00000618285 3373 ntBASIC4.07□□□□□ -1.76
U3KQE9 ANK2-202ENST00000357077 14196 ntAPPRIS P3 TSL 1 (best) BASIC4.07□□□□□ -1.76
U3KQE9 AC092447.5-201ENST00000429367 2741 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
U3KQE9 RGS4-202ENST00000367908 2606 ntTSL 2 BASIC4.07□□□□□ -1.76
U3KQE9 GPR85-201ENST00000297146 5079 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
U3KQE9 KRTAP24-1-201ENST00000340345 1650 ntAPPRIS P1 BASIC4.06□□□□□ -1.76
U3KQE9 ADGRL2-206ENST00000370721 5023 ntTSL 5 BASIC4.06□□□□□ -1.76
U3KQE9 ATF2-201ENST00000264110 4176 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
U3KQE9 AMY1C-201ENST00000370079 1632 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
U3KQE9 CASP10-204ENST00000346817 3926 ntAPPRIS ALT2 TSL 5 BASIC4.06□□□□□ -1.76
U3KQE9 ANGPTL1-202ENST00000367629 2289 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
U3KQE9 C1orf140-202ENST00000439004 4340 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
U3KQE9 LINC01355-201ENST00000566551 5444 ntBASIC4.06□□□□□ -1.76
U3KQE9 TJP1-202ENST00000356107 6747 ntAPPRIS ALT2 TSL 5 BASIC4.06□□□□□ -1.76
U3KQE9 RNA5SP335-201ENST00000363817 110 ntBASIC4.06□□□□□ -1.76
U3KQE9 Y_RNA.262-201ENST00000364641 102 ntBASIC4.06□□□□□ -1.76
U3KQE9 RN7SKP124-201ENST00000364730 341 ntBASIC4.06□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 102 ms