Protein–RNA interactions for Protein: Q9UQ88

CDK11A, Cyclin-dependent kinase 11A, humanhuman

Predicted RBP Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK11AQ9UQ88 APAF1-207ENST00000547743 651 ntTSL 3 BASIC5.13□□□□□ -1.59
CDK11AQ9UQ88 AC009145.3-201ENST00000567386 476 ntTSL 3 BASIC5.13□□□□□ -1.59
CDK11AQ9UQ88 DLGAP1-AS4-201ENST00000582054 757 ntTSL 5 BASIC5.13□□□□□ -1.59
CDK11AQ9UQ88 AC012507.3-201ENST00000603556 477 ntBASIC5.13□□□□□ -1.59
CDK11AQ9UQ88 RNVU1-4-201ENST00000612985 164 ntBASIC5.13□□□□□ -1.59
CDK11AQ9UQ88 SULT1B1-201ENST00000310613 7115 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
CDK11AQ9UQ88 AGL-205ENST00000370163 7166 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
CDK11AQ9UQ88 C5orf42-205ENST00000508244 11062 ntAPPRIS P2 TSL 5 BASIC5.12□□□□□ -1.59
CDK11AQ9UQ88 RNU6-1097P-201ENST00000363586 107 ntBASIC5.12□□□□□ -1.59
CDK11AQ9UQ88 SNORA80A-201ENST00000363922 136 ntBASIC5.12□□□□□ -1.59
CDK11AQ9UQ88 U3.11-201ENST00000364476 212 ntBASIC5.12□□□□□ -1.59
CDK11AQ9UQ88 RNA5-8SP4-201ENST00000365096 150 ntBASIC5.12□□□□□ -1.59
CDK11AQ9UQ88 BTF3P7-201ENST00000407097 488 ntBASIC5.12□□□□□ -1.59
CDK11AQ9UQ88 AL158071.1-201ENST00000430315 461 ntBASIC5.12□□□□□ -1.59
CDK11AQ9UQ88 ACBD3-AS1-201ENST00000440540 535 ntTSL 5 BASIC5.12□□□□□ -1.59
CDK11AQ9UQ88 AL354936.1-201ENST00000441521 649 ntTSL 5 BASIC5.12□□□□□ -1.59
CDK11AQ9UQ88 AC008264.1-201ENST00000447612 367 ntBASIC5.12□□□□□ -1.59
CDK11AQ9UQ88 AC140076.1-201ENST00000449897 361 ntBASIC5.12□□□□□ -1.59
CDK11AQ9UQ88 RPL23AP67-201ENST00000465341 474 ntBASIC5.12□□□□□ -1.59
CDK11AQ9UQ88 ANKRD36B-207ENST00000497329 649 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
CDK11AQ9UQ88 AC022272.1-201ENST00000503478 777 ntTSL 2 BASIC5.12□□□□□ -1.59
CDK11AQ9UQ88 RNU2-10P-201ENST00000516375 211 ntBASIC5.12□□□□□ -1.59
CDK11AQ9UQ88 HDAC2-AS2-206ENST00000517965 850 ntTSL 3 BASIC5.12□□□□□ -1.59
CDK11AQ9UQ88 MS4A4E-204ENST00000526086 460 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
CDK11AQ9UQ88 AP003718.1-201ENST00000529884 583 ntTSL 4 BASIC5.12□□□□□ -1.59
CDK11AQ9UQ88 HOMER1-205ENST00000535690 642 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
CDK11AQ9UQ88 AC079584.2-201ENST00000548756 515 ntTSL 3 BASIC5.12□□□□□ -1.59
CDK11AQ9UQ88 SUB1P2-201ENST00000556401 297 ntBASIC5.12□□□□□ -1.59
CDK11AQ9UQ88 AC012100.2-201ENST00000558317 304 ntTSL 5 BASIC5.12□□□□□ -1.59
CDK11AQ9UQ88 AC007598.2-201ENST00000569490 539 ntTSL 3 BASIC5.12□□□□□ -1.59
CDK11AQ9UQ88 HNRNPDLP4-201ENST00000605144 301 ntBASIC5.12□□□□□ -1.59
CDK11AQ9UQ88 AC006386.2-201ENST00000624491 75 ntBASIC5.12□□□□□ -1.59
CDK11AQ9UQ88 AC012005.1-201ENST00000624575 75 ntBASIC5.12□□□□□ -1.59
CDK11AQ9UQ88 GPRC6A-202ENST00000368549 2622 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
CDK11AQ9UQ88 XRCC4-203ENST00000396027 1530 ntAPPRIS ALT1 TSL 5 BASIC5.12□□□□□ -1.59
CDK11AQ9UQ88 AC008568.2-201ENST00000623862 2313 ntBASIC5.12□□□□□ -1.59
CDK11AQ9UQ88 SUGT1-201ENST00000310528 14131 ntAPPRIS P3 TSL 1 (best) BASIC5.12□□□□□ -1.59
CDK11AQ9UQ88 MME-201ENST00000360490 2360 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
CDK11AQ9UQ88 FOXP2-206ENST00000393491 6085 ntTSL 5 BASIC5.11□□□□□ -1.59
CDK11AQ9UQ88 PPIP5K2-203ENST00000414217 5842 ntAPPRIS P3 TSL 1 (best) BASIC5.11□□□□□ -1.59
CDK11AQ9UQ88 ZNF705G-201ENST00000400156 3644 ntAPPRIS P1 TSL 2 BASIC5.11□□□□□ -1.59
CDK11AQ9UQ88 KCNE2-201ENST00000290310 1051 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
CDK11AQ9UQ88 RNU6-282P-201ENST00000365357 103 ntBASIC5.11□□□□□ -1.59
CDK11AQ9UQ88 RNU6-108P-201ENST00000365558 107 ntBASIC5.11□□□□□ -1.59
CDK11AQ9UQ88 Y_RNA.372-201ENST00000365599 102 ntBASIC5.11□□□□□ -1.59
CDK11AQ9UQ88 SPRR2D-203ENST00000368757 800 ntAPPRIS P1 TSL 3 BASIC5.11□□□□□ -1.59
CDK11AQ9UQ88 RNU6-456P-201ENST00000384493 107 ntBASIC5.11□□□□□ -1.59
CDK11AQ9UQ88 Y_RNA.554-201ENST00000384672 102 ntBASIC5.11□□□□□ -1.59
CDK11AQ9UQ88 TRDJ1-201ENST00000390473 51 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
CDK11AQ9UQ88 STAP1-202ENST00000396225 1146 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
CDK11AQ9UQ88 CIR1P3-201ENST00000405137 479 ntBASIC5.11□□□□□ -1.59
CDK11AQ9UQ88 AC106873.1-201ENST00000420664 459 ntTSL 3 BASIC5.11□□□□□ -1.59
CDK11AQ9UQ88 GPR143P-201ENST00000434155 205 ntBASIC5.11□□□□□ -1.59
CDK11AQ9UQ88 AC078845.1-202ENST00000435996 733 ntTSL 3 BASIC5.11□□□□□ -1.59
CDK11AQ9UQ88 NDUFB4P6-201ENST00000436819 366 ntBASIC5.11□□□□□ -1.59
CDK11AQ9UQ88 AC079781.2-201ENST00000446424 169 ntBASIC5.11□□□□□ -1.59
CDK11AQ9UQ88 AL590664.1-201ENST00000448065 339 ntBASIC5.11□□□□□ -1.59
CDK11AQ9UQ88 AL359095.1-201ENST00000457383 635 ntTSL 3 BASIC5.11□□□□□ -1.59
CDK11AQ9UQ88 AC022364.2-201ENST00000457963 554 ntBASIC5.11□□□□□ -1.59
CDK11AQ9UQ88 UBE2DNL-203ENST00000474922 222 ntBASIC5.11□□□□□ -1.59
CDK11AQ9UQ88 RPL30P14-201ENST00000482744 348 ntBASIC5.11□□□□□ -1.59
CDK11AQ9UQ88 AC109927.2-201ENST00000506416 303 ntBASIC5.11□□□□□ -1.59
CDK11AQ9UQ88 MTND4LP22-201ENST00000508209 276 ntBASIC5.11□□□□□ -1.59
CDK11AQ9UQ88 SNORD59.2-201ENST00000516873 68 ntBASIC5.11□□□□□ -1.59
CDK11AQ9UQ88 AP002768.1-201ENST00000526741 320 ntTSL 3 BASIC5.11□□□□□ -1.59
CDK11AQ9UQ88 AP002404.1-201ENST00000532005 451 ntBASIC5.11□□□□□ -1.59
CDK11AQ9UQ88 SDHAF2-203ENST00000534878 523 ntTSL 2 BASIC5.11□□□□□ -1.59
CDK11AQ9UQ88 AC090023.1-201ENST00000545750 443 ntTSL 3 BASIC5.11□□□□□ -1.59
CDK11AQ9UQ88 AC015917.1-201ENST00000579654 510 ntBASIC5.11□□□□□ -1.59
CDK11AQ9UQ88 TFEC-201ENST00000265440 6628 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
CDK11AQ9UQ88 HSFY2-201ENST00000304790 1444 ntAPPRIS P5 TSL 1 (best) BASIC5.11□□□□□ -1.59
CDK11AQ9UQ88 HSFY1-201ENST00000307393 1444 ntAPPRIS P5 TSL 1 (best) BASIC5.11□□□□□ -1.59
CDK11AQ9UQ88 UBA5-201ENST00000264991 2850 ntTSL 5 BASIC5.11□□□□□ -1.59
CDK11AQ9UQ88 AC100800.1-201ENST00000524252 2054 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
CDK11AQ9UQ88 KIAA1841-202ENST00000356719 2149 ntTSL 5 BASIC5.11□□□□□ -1.59
CDK11AQ9UQ88 ZNF280C-201ENST00000370978 4634 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
CDK11AQ9UQ88 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC5.1□□□□□ -1.59
CDK11AQ9UQ88 PHF6-205ENST00000625464 4434 ntAPPRIS ALT1 TSL 5 BASIC5.1□□□□□ -1.59
CDK11AQ9UQ88 ERBIN-201ENST00000284037 8647 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
CDK11AQ9UQ88 OR5J1P-201ENST00000313544 939 ntBASIC5.1□□□□□ -1.59
CDK11AQ9UQ88 HMGB1-201ENST00000326004 821 ntTSL 3 BASIC5.1□□□□□ -1.59
CDK11AQ9UQ88 RNU4-12P-201ENST00000365233 139 ntBASIC5.1□□□□□ -1.59
CDK11AQ9UQ88 RNU6-169P-201ENST00000365336 107 ntBASIC5.1□□□□□ -1.59
CDK11AQ9UQ88 LGI1-201ENST00000371413 1247 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
CDK11AQ9UQ88 CCDC141-202ENST00000409284 6960 ntAPPRIS P2 TSL 1 (best) BASIC5.1□□□□□ -1.59
CDK11AQ9UQ88 AL078645.1-201ENST00000414377 423 ntTSL 3 BASIC5.1□□□□□ -1.59
CDK11AQ9UQ88 BX005214.1-201ENST00000427327 476 ntTSL 5 BASIC5.1□□□□□ -1.59
CDK11AQ9UQ88 AL603839.2-201ENST00000437060 546 ntTSL 5 BASIC5.1□□□□□ -1.59
CDK11AQ9UQ88 AC097347.1-201ENST00000438499 517 ntTSL 3 BASIC5.1□□□□□ -1.59
CDK11AQ9UQ88 Z99127.3-201ENST00000448158 395 ntBASIC5.1□□□□□ -1.59
CDK11AQ9UQ88 KIAA1524-206ENST00000491772 3877 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
CDK11AQ9UQ88 SLC7A11-AS1-201ENST00000510066 817 ntTSL 2 BASIC5.1□□□□□ -1.59
CDK11AQ9UQ88 AC009646.1-201ENST00000510455 318 ntBASIC5.1□□□□□ -1.59
CDK11AQ9UQ88 AP003469.3-201ENST00000518090 473 ntTSL 3 BASIC5.1□□□□□ -1.59
CDK11AQ9UQ88 RGS5-206ENST00000527988 373 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
CDK11AQ9UQ88 AL121576.1-201ENST00000556055 276 ntBASIC5.1□□□□□ -1.59
CDK11AQ9UQ88 AC017071.1-201ENST00000564407 2204 ntBASIC5.1□□□□□ -1.59
CDK11AQ9UQ88 AC044798.1-201ENST00000565146 418 ntTSL 5 BASIC5.1□□□□□ -1.59
CDK11AQ9UQ88 LINC01735-201ENST00000568112 279 ntTSL 3 BASIC5.1□□□□□ -1.59
CDK11AQ9UQ88 AC118755.2-201ENST00000584676 212 ntTSL 3 BASIC5.1□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 106.1 ms