Protein–RNA interactions for Protein: Q9UPQ7

PDZRN3, E3 ubiquitin-protein ligase PDZRN3, humanhuman

Predictions only

Length 1,066 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3Q9UPQ7 AC068724.3-201ENST00000625906 87 ntBASIC6.1□□□□□ -1.43
PDZRN3Q9UPQ7 OSBPL9P4-201ENST00000371707 1800 ntBASIC6.1□□□□□ -1.43
PDZRN3Q9UPQ7 HERC4-205ENST00000412272 4211 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
PDZRN3Q9UPQ7 UBE3A-203ENST00000428984 2986 ntAPPRIS P3 TSL 5 BASIC6.1□□□□□ -1.43
PDZRN3Q9UPQ7 MTND5P9-201ENST00000503854 1755 ntBASIC6.1□□□□□ -1.43
PDZRN3Q9UPQ7 CDK14-203ENST00000406263 5163 ntAPPRIS ALT2 TSL 1 (best) BASIC6.1□□□□□ -1.43
PDZRN3Q9UPQ7 GPBP1-205ENST00000511209 2243 ntAPPRIS ALT2 TSL 2 BASIC6.1□□□□□ -1.43
PDZRN3Q9UPQ7 SULF1-204ENST00000458141 5551 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
PDZRN3Q9UPQ7 CYP7A1-201ENST00000301645 2950 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
PDZRN3Q9UPQ7 CROT-204ENST00000442291 1993 ntTSL 5 BASIC6.09□□□□□ -1.43
PDZRN3Q9UPQ7 CDH17-201ENST00000027335 3693 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
PDZRN3Q9UPQ7 BTBD10P1-201ENST00000549824 1352 ntBASIC6.09□□□□□ -1.43
PDZRN3Q9UPQ7 STARD9-201ENST00000290607 15567 ntAPPRIS P1 TSL 5 BASIC6.09□□□□□ -1.43
PDZRN3Q9UPQ7 HUWE1-214ENST00000612484 14311 ntTSL 5 BASIC6.09□□□□□ -1.43
PDZRN3Q9UPQ7 CAST-201ENST00000309190 4282 ntAPPRIS P3 TSL 1 (best) BASIC6.09□□□□□ -1.43
PDZRN3Q9UPQ7 RNU4-44P-201ENST00000363050 141 ntBASIC6.09□□□□□ -1.43
PDZRN3Q9UPQ7 CRP-202ENST00000368110 667 ntTSL 3 BASIC6.09□□□□□ -1.43
PDZRN3Q9UPQ7 Y_RNA.533-201ENST00000384596 114 ntBASIC6.09□□□□□ -1.43
PDZRN3Q9UPQ7 MIR320B1-201ENST00000390209 79 ntBASIC6.09□□□□□ -1.43
PDZRN3Q9UPQ7 LINC02331-201ENST00000418927 602 ntTSL 5 BASIC6.09□□□□□ -1.43
PDZRN3Q9UPQ7 AC093106.2-201ENST00000428212 385 ntBASIC6.09□□□□□ -1.43
PDZRN3Q9UPQ7 AC092162.1-201ENST00000432828 434 ntBASIC6.09□□□□□ -1.43
PDZRN3Q9UPQ7 AC084149.1-201ENST00000437233 284 ntTSL 5 BASIC6.09□□□□□ -1.43
PDZRN3Q9UPQ7 KIAA0895-209ENST00000453212 956 ntTSL 3 BASIC6.09□□□□□ -1.43
PDZRN3Q9UPQ7 HMGN3P1-201ENST00000453847 193 ntBASIC6.09□□□□□ -1.43
PDZRN3Q9UPQ7 AC091153.1-201ENST00000466297 402 ntBASIC6.09□□□□□ -1.43
PDZRN3Q9UPQ7 AC007016.1-201ENST00000512110 244 ntBASIC6.09□□□□□ -1.43
PDZRN3Q9UPQ7 RNU6-168P-201ENST00000516189 101 ntBASIC6.09□□□□□ -1.43
PDZRN3Q9UPQ7 RNA5SP464-201ENST00000516251 108 ntBASIC6.09□□□□□ -1.43
PDZRN3Q9UPQ7 AC104576.1-201ENST00000524225 88 ntBASIC6.09□□□□□ -1.43
PDZRN3Q9UPQ7 AC104002.2-201ENST00000553919 318 ntTSL 5 BASIC6.09□□□□□ -1.43
PDZRN3Q9UPQ7 MIR3160-1-201ENST00000577972 85 ntBASIC6.09□□□□□ -1.43
PDZRN3Q9UPQ7 AC017100.2-201ENST00000584628 355 ntBASIC6.09□□□□□ -1.43
PDZRN3Q9UPQ7 LINC00904-201ENST00000604453 471 ntTSL 2 BASIC6.09□□□□□ -1.43
PDZRN3Q9UPQ7 AC019080.3-201ENST00000606180 444 ntTSL 5 BASIC6.09□□□□□ -1.43
PDZRN3Q9UPQ7 AL356056.1-205ENST00000608904 651 ntTSL 5 BASIC6.09□□□□□ -1.43
PDZRN3Q9UPQ7 FAM27B-201ENST00000610601 213 ntBASIC6.09□□□□□ -1.43
PDZRN3Q9UPQ7 AL591516.1-201ENST00000611326 274 ntBASIC6.09□□□□□ -1.43
PDZRN3Q9UPQ7 AC097372.5-201ENST00000623665 376 ntBASIC6.09□□□□□ -1.43
PDZRN3Q9UPQ7 DTNA-229ENST00000598142 2509 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
PDZRN3Q9UPQ7 AC233981.2-201ENST00000611524 1614 ntBASIC6.09□□□□□ -1.43
PDZRN3Q9UPQ7 AL445487.1-201ENST00000415694 1580 ntBASIC6.09□□□□□ -1.43
PDZRN3Q9UPQ7 CFAP70-201ENST00000310715 3703 ntAPPRIS P1 TSL 5 BASIC6.09□□□□□ -1.44
PDZRN3Q9UPQ7 OR10Z1-202ENST00000641002 6323 ntAPPRIS P1 BASIC6.08□□□□□ -1.44
PDZRN3Q9UPQ7 XKR4-201ENST00000327381 19880 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
PDZRN3Q9UPQ7 SMG1P4-204ENST00000523028 4131 ntBASIC6.08□□□□□ -1.44
PDZRN3Q9UPQ7 SCN2A-203ENST00000375437 8792 ntAPPRIS ALT1 TSL 5 BASIC6.08□□□□□ -1.44
PDZRN3Q9UPQ7 MGAT4A-203ENST00000409391 2018 ntAPPRIS P1 TSL 5 BASIC6.08□□□□□ -1.44
PDZRN3Q9UPQ7 EYA1-205ENST00000388742 3907 ntAPPRIS P3 TSL 1 (best) BASIC6.08□□□□□ -1.44
PDZRN3Q9UPQ7 CNTN6-205ENST00000446702 4513 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
PDZRN3Q9UPQ7 Y_RNA.82-201ENST00000363000 102 ntBASIC6.08□□□□□ -1.44
PDZRN3Q9UPQ7 Y_RNA.92-201ENST00000363043 102 ntBASIC6.08□□□□□ -1.44
PDZRN3Q9UPQ7 RNA5SP447-201ENST00000363749 119 ntBASIC6.08□□□□□ -1.44
PDZRN3Q9UPQ7 Y_RNA.235-201ENST00000364412 102 ntBASIC6.08□□□□□ -1.44
PDZRN3Q9UPQ7 Y_RNA.306-201ENST00000365015 102 ntBASIC6.08□□□□□ -1.44
PDZRN3Q9UPQ7 Y_RNA.308-201ENST00000365043 101 ntBASIC6.08□□□□□ -1.44
PDZRN3Q9UPQ7 Y_RNA.312-201ENST00000365089 102 ntBASIC6.08□□□□□ -1.44
PDZRN3Q9UPQ7 Y_RNA.322-201ENST00000365151 102 ntBASIC6.08□□□□□ -1.44
PDZRN3Q9UPQ7 RNU6-444P-201ENST00000383988 108 ntBASIC6.08□□□□□ -1.44
PDZRN3Q9UPQ7 RNU6-937P-201ENST00000384325 106 ntBASIC6.08□□□□□ -1.44
PDZRN3Q9UPQ7 RNU6-178P-201ENST00000384631 104 ntBASIC6.08□□□□□ -1.44
PDZRN3Q9UPQ7 TRAV21-201ENST00000390449 343 ntAPPRIS P1 BASIC6.08□□□□□ -1.44
PDZRN3Q9UPQ7 AL590290.1-201ENST00000405336 380 ntBASIC6.08□□□□□ -1.44
PDZRN3Q9UPQ7 MIR1193-201ENST00000408109 78 ntBASIC6.08□□□□□ -1.44
PDZRN3Q9UPQ7 TBCAP2-201ENST00000416175 326 ntBASIC6.08□□□□□ -1.44
PDZRN3Q9UPQ7 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC6.08□□□□□ -1.44
PDZRN3Q9UPQ7 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC6.08□□□□□ -1.44
PDZRN3Q9UPQ7 AC005871.1-201ENST00000450247 475 ntTSL 3 BASIC6.08□□□□□ -1.44
PDZRN3Q9UPQ7 AC010733.1-201ENST00000451515 401 ntBASIC6.08□□□□□ -1.44
PDZRN3Q9UPQ7 AC005229.2-201ENST00000456995 399 ntBASIC6.08□□□□□ -1.44
PDZRN3Q9UPQ7 Y_RNA.650-201ENST00000459002 102 ntBASIC6.08□□□□□ -1.44
PDZRN3Q9UPQ7 RNA5SP103-201ENST00000459503 118 ntBASIC6.08□□□□□ -1.44
PDZRN3Q9UPQ7 LRRC77P-202ENST00000463642 457 ntTSL 4 BASIC6.08□□□□□ -1.44
PDZRN3Q9UPQ7 CREM-230ENST00000474931 626 ntTSL 2 BASIC6.08□□□□□ -1.44
PDZRN3Q9UPQ7 NIP7P2-201ENST00000485801 544 ntBASIC6.08□□□□□ -1.44
PDZRN3Q9UPQ7 AC005798.1-201ENST00000513715 387 ntBASIC6.08□□□□□ -1.44
PDZRN3Q9UPQ7 Y_RNA.694-201ENST00000516677 117 ntBASIC6.08□□□□□ -1.44
PDZRN3Q9UPQ7 RN7SKP96-201ENST00000516948 297 ntBASIC6.08□□□□□ -1.44
PDZRN3Q9UPQ7 Y_RNA.777-201ENST00000516982 102 ntBASIC6.08□□□□□ -1.44
PDZRN3Q9UPQ7 AL442163.3-201ENST00000554110 156 ntBASIC6.08□□□□□ -1.44
PDZRN3Q9UPQ7 TRAV28-201ENST00000557548 323 ntBASIC6.08□□□□□ -1.44
PDZRN3Q9UPQ7 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC6.08□□□□□ -1.44
PDZRN3Q9UPQ7 Y_RNA.771-201ENST00000598668 102 ntBASIC6.08□□□□□ -1.44
PDZRN3Q9UPQ7 Z84484.1-202ENST00000612718 60 ntTSL 5 BASIC6.08□□□□□ -1.44
PDZRN3Q9UPQ7 Y_RNA.778-201ENST00000620203 90 ntBASIC6.08□□□□□ -1.44
PDZRN3Q9UPQ7 Y_RNA.789-201ENST00000622480 102 ntBASIC6.08□□□□□ -1.44
PDZRN3Q9UPQ7 SRRM1-203ENST00000447431 3691 ntAPPRIS ALT2 TSL 5 BASIC6.08□□□□□ -1.44
PDZRN3Q9UPQ7 LRP1B-201ENST00000389484 16535 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
PDZRN3Q9UPQ7 DGKH-206ENST00000536612 3957 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
PDZRN3Q9UPQ7 ZNF479-201ENST00000319636 1811 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
PDZRN3Q9UPQ7 AC008758.3-201ENST00000507003 1829 ntBASIC6.08□□□□□ -1.44
PDZRN3Q9UPQ7 MTND5P32-201ENST00000560711 1802 ntBASIC6.08□□□□□ -1.44
PDZRN3Q9UPQ7 ZMYM6-201ENST00000317538 2702 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
PDZRN3Q9UPQ7 OR2H1-203ENST00000377136 3024 ntAPPRIS P1 BASIC6.08□□□□□ -1.44
PDZRN3Q9UPQ7 SLMAP-206ENST00000428312 4132 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
PDZRN3Q9UPQ7 SLC24A2-202ENST00000341998 10749 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
PDZRN3Q9UPQ7 GALNT13-202ENST00000409237 2591 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
PDZRN3Q9UPQ7 MUC2-202ENST00000613187 4845 ntBASIC6.08□□□□□ -1.44
PDZRN3Q9UPQ7 SLCO1B1-201ENST00000256958 2229 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
PDZRN3Q9UPQ7 AC126323.6-202ENST00000568092 3511 ntBASIC6.07□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 133.9 ms