Protein–RNA interactions for Protein: Q9P1Z9

CCDC180, Coiled-coil domain-containing protein 180, humanhuman

Predictions only

Length 1,646 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC180Q9P1Z9 MRPL35P3-201ENST00000421557 364 ntBASIC1.55□□□□□ -2.16
CCDC180Q9P1Z9 TRAPPC2P4-201ENST00000421750 331 ntBASIC1.55□□□□□ -2.16
CCDC180Q9P1Z9 AL662889.1-201ENST00000453572 389 ntTSL 3 BASIC1.55□□□□□ -2.16
CCDC180Q9P1Z9 RPS20P20-201ENST00000460498 340 ntBASIC1.55□□□□□ -2.16
CCDC180Q9P1Z9 AC006063.1-201ENST00000512511 560 ntTSL 4 BASIC1.55□□□□□ -2.16
CCDC180Q9P1Z9 AC096772.1-201ENST00000609146 564 ntBASIC1.55□□□□□ -2.16
CCDC180Q9P1Z9 SATB1-AS1-269ENST00000630766 591 ntTSL 5 BASIC1.55□□□□□ -2.16
CCDC180Q9P1Z9 OR4G2P-201ENST00000328113 903 ntBASIC1.54□□□□□ -2.16
CCDC180Q9P1Z9 RNA5SP62-201ENST00000363457 110 ntBASIC1.54□□□□□ -2.16
CCDC180Q9P1Z9 SNORA3A-201ENST00000364113 130 ntBASIC1.54□□□□□ -2.16
CCDC180Q9P1Z9 RNU6-939P-201ENST00000384634 107 ntBASIC1.54□□□□□ -2.16
CCDC180Q9P1Z9 Z80107.1-201ENST00000436830 412 ntBASIC1.54□□□□□ -2.16
CCDC180Q9P1Z9 RPL30P11-201ENST00000495304 339 ntBASIC1.54□□□□□ -2.16
CCDC180Q9P1Z9 LINC01088-203ENST00000507476 785 ntTSL 3 BASIC1.54□□□□□ -2.16
CCDC180Q9P1Z9 RRN3P3-201ENST00000549207 578 ntBASIC1.54□□□□□ -2.16
CCDC180Q9P1Z9 CENPUP2-201ENST00000555897 1186 ntBASIC1.54□□□□□ -2.16
CCDC180Q9P1Z9 AC090517.3-201ENST00000625170 141 ntBASIC1.54□□□□□ -2.16
CCDC180Q9P1Z9 AC007785.2-201ENST00000598627 1916 ntBASIC1.53□□□□□ -2.16
CCDC180Q9P1Z9 MTND5P9-201ENST00000503854 1755 ntBASIC1.53□□□□□ -2.16
CCDC180Q9P1Z9 Y_RNA.178-201ENST00000363832 102 ntBASIC1.53□□□□□ -2.16
CCDC180Q9P1Z9 AC233728.2-201ENST00000425348 757 ntBASIC1.53□□□□□ -2.16
CCDC180Q9P1Z9 AC025566.1-201ENST00000477153 490 ntTSL 3 BASIC1.53□□□□□ -2.16
CCDC180Q9P1Z9 AC018437.1-201ENST00000492214 406 ntBASIC1.53□□□□□ -2.16
CCDC180Q9P1Z9 AC104806.1-201ENST00000508720 308 ntBASIC1.53□□□□□ -2.16
CCDC180Q9P1Z9 AC025434.1-201ENST00000520705 460 ntTSL 3 BASIC1.53□□□□□ -2.16
CCDC180Q9P1Z9 AC005498.1-201ENST00000592125 465 ntBASIC1.53□□□□□ -2.16
CCDC180Q9P1Z9 AC010127.1-205ENST00000595268 567 ntTSL 5 BASIC1.53□□□□□ -2.16
CCDC180Q9P1Z9 MIR8087-201ENST00000612745 78 ntBASIC1.53□□□□□ -2.16
CCDC180Q9P1Z9 RNU6-50P-201ENST00000362356 103 ntBASIC1.52□□□□□ -2.17
CCDC180Q9P1Z9 AL049649.1-202ENST00000412405 414 ntTSL 3 BASIC1.52□□□□□ -2.17
CCDC180Q9P1Z9 AL122008.1-201ENST00000456078 452 ntTSL 3 BASIC1.52□□□□□ -2.17
CCDC180Q9P1Z9 NAP1L1P3-201ENST00000462291 880 ntBASIC1.52□□□□□ -2.17
CCDC180Q9P1Z9 NUTF2P8-201ENST00000604593 363 ntBASIC1.52□□□□□ -2.17
CCDC180Q9P1Z9 MIR924-201ENST00000638017 53 ntBASIC1.52□□□□□ -2.17
CCDC180Q9P1Z9 ZNF382-210ENST00000639288 834 ntTSL 5 BASIC1.52□□□□□ -2.17
CCDC180Q9P1Z9 AL139254.1-201ENST00000421114 376 ntTSL 3 BASIC1.51□□□□□ -2.17
CCDC180Q9P1Z9 RPL27AP8-201ENST00000424277 446 ntBASIC1.51□□□□□ -2.17
CCDC180Q9P1Z9 LINC01953-201ENST00000426870 717 ntTSL 5 BASIC1.51□□□□□ -2.17
CCDC180Q9P1Z9 AL031183.1-201ENST00000457667 207 ntBASIC1.51□□□□□ -2.17
CCDC180Q9P1Z9 CABYRP1-201ENST00000465493 1045 ntBASIC1.51□□□□□ -2.17
CCDC180Q9P1Z9 SULT1C2P1-202ENST00000562418 459 ntBASIC1.51□□□□□ -2.17
CCDC180Q9P1Z9 MIR4287-201ENST00000579398 78 ntBASIC1.51□□□□□ -2.17
CCDC180Q9P1Z9 AC005786.1-201ENST00000588553 154 ntBASIC1.51□□□□□ -2.17
CCDC180Q9P1Z9 AP001350.1-201ENST00000601906 1524 ntBASIC1.51□□□□□ -2.17
CCDC180Q9P1Z9 RNU6-942P-201ENST00000363002 107 ntBASIC1.51□□□□□ -2.17
CCDC180Q9P1Z9 AC003092.2-201ENST00000411946 446 ntTSL 2 BASIC1.51□□□□□ -2.17
CCDC180Q9P1Z9 AC241644.2-201ENST00000426504 480 ntTSL 3 BASIC1.51□□□□□ -2.17
CCDC180Q9P1Z9 AC012497.1-201ENST00000429392 575 ntBASIC1.51□□□□□ -2.17
CCDC180Q9P1Z9 AC022690.1-201ENST00000526681 550 ntBASIC1.51□□□□□ -2.17
CCDC180Q9P1Z9 MIR6835-201ENST00000621552 64 ntBASIC1.51□□□□□ -2.17
CCDC180Q9P1Z9 P2RY12-201ENST00000302632 1766 ntAPPRIS P1 TSL 1 (best) BASIC1.5□□□□□ -2.17
CCDC180Q9P1Z9 RNU6-19P-201ENST00000384718 107 ntBASIC1.5□□□□□ -2.17
CCDC180Q9P1Z9 RPS24P6-201ENST00000452670 400 ntBASIC1.5□□□□□ -2.17
CCDC180Q9P1Z9 EIF4EP3-201ENST00000498782 656 ntBASIC1.5□□□□□ -2.17
CCDC180Q9P1Z9 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC1.5□□□□□ -2.17
CCDC180Q9P1Z9 AC106791.2-201ENST00000604680 391 ntBASIC1.5□□□□□ -2.17
CCDC180Q9P1Z9 AL360085.1-201ENST00000604713 532 ntBASIC1.5□□□□□ -2.17
CCDC180Q9P1Z9 AL592148.2-201ENST00000612210 372 ntBASIC1.5□□□□□ -2.17
CCDC180Q9P1Z9 AC022513.1-201ENST00000624512 117 ntBASIC1.5□□□□□ -2.17
CCDC180Q9P1Z9 ZNF519P1-201ENST00000449011 1626 ntBASIC1.5□□□□□ -2.17
CCDC180Q9P1Z9 MIR508-201ENST00000384857 115 ntBASIC1.49□□□□□ -2.17
CCDC180Q9P1Z9 AC093716.1-201ENST00000435923 377 ntBASIC1.49□□□□□ -2.17
CCDC180Q9P1Z9 MTCO3P35-201ENST00000485582 781 ntBASIC1.49□□□□□ -2.17
CCDC180Q9P1Z9 SCOC-206ENST00000506322 687 ntAPPRIS ALT1 TSL 5 BASIC1.49□□□□□ -2.17
CCDC180Q9P1Z9 PCAT4-202ENST00000514836 373 ntTSL 3 BASIC1.49□□□□□ -2.17
CCDC180Q9P1Z9 AC004812.1-201ENST00000540773 146 ntBASIC1.49□□□□□ -2.17
CCDC180Q9P1Z9 AC090912.2-203ENST00000581177 477 ntTSL 3 BASIC1.49□□□□□ -2.17
CCDC180Q9P1Z9 AL161423.1-201ENST00000613700 262 ntBASIC1.49□□□□□ -2.17
CCDC180Q9P1Z9 RNA5SP105-201ENST00000391123 113 ntBASIC1.48□□□□□ -2.17
CCDC180Q9P1Z9 AC087879.1-201ENST00000474343 374 ntBASIC1.48□□□□□ -2.17
CCDC180Q9P1Z9 AC091965.2-201ENST00000512324 613 ntBASIC1.48□□□□□ -2.17
CCDC180Q9P1Z9 EIF4EP5-201ENST00000528228 640 ntBASIC1.48□□□□□ -2.17
CCDC180Q9P1Z9 GAS5-AS1-201ENST00000602767 694 ntBASIC1.48□□□□□ -2.17
CCDC180Q9P1Z9 AP003072.4-201ENST00000624580 310 ntBASIC1.48□□□□□ -2.17
CCDC180Q9P1Z9 RNA5SP499-201ENST00000363982 119 ntBASIC1.48□□□□□ -2.17
CCDC180Q9P1Z9 TXNDC8-202ENST00000374510 455 ntAPPRIS P2 TSL 1 (best) BASIC1.48□□□□□ -2.17
CCDC180Q9P1Z9 RNU6-1235P-201ENST00000384559 107 ntBASIC1.48□□□□□ -2.17
CCDC180Q9P1Z9 USP12PX-201ENST00000432383 1057 ntBASIC1.48□□□□□ -2.17
CCDC180Q9P1Z9 JTBP1-201ENST00000441314 247 ntBASIC1.48□□□□□ -2.17
CCDC180Q9P1Z9 RNU6-498P-201ENST00000459468 107 ntBASIC1.48□□□□□ -2.17
CCDC180Q9P1Z9 AC109635.4-202ENST00000531666 412 ntBASIC1.48□□□□□ -2.17
CCDC180Q9P1Z9 AC021646.1-201ENST00000605469 484 ntBASIC1.48□□□□□ -2.17
CCDC180Q9P1Z9 STATH-201ENST00000246895 598 ntAPPRIS P1 TSL 1 (best) BASIC1.47□□□□□ -2.17
CCDC180Q9P1Z9 RNU6-16P-201ENST00000384385 107 ntBASIC1.47□□□□□ -2.17
CCDC180Q9P1Z9 AC023141.11-201ENST00000508864 202 ntBASIC1.47□□□□□ -2.17
CCDC180Q9P1Z9 RN7SKP5-201ENST00000517045 272 ntBASIC1.47□□□□□ -2.17
CCDC180Q9P1Z9 AP003072.2-201ENST00000527756 676 ntBASIC1.47□□□□□ -2.17
CCDC180Q9P1Z9 LINC02416-201ENST00000550019 540 ntTSL 4 BASIC1.47□□□□□ -2.17
CCDC180Q9P1Z9 MIR2909-201ENST00000617113 69 ntBASIC1.47□□□□□ -2.17
CCDC180Q9P1Z9 LMBRD1-201ENST00000370570 2099 ntTSL 1 (best) BASIC1.47□□□□□ -2.17
CCDC180Q9P1Z9 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC1.46□□□□□ -2.18
CCDC180Q9P1Z9 LINC00971-201ENST00000482721 535 ntTSL 2 BASIC1.46□□□□□ -2.18
CCDC180Q9P1Z9 AC105914.1-201ENST00000511798 226 ntBASIC1.46□□□□□ -2.18
CCDC180Q9P1Z9 Y_RNA.681-201ENST00000516445 113 ntBASIC1.46□□□□□ -2.18
CCDC180Q9P1Z9 AC090616.5-202ENST00000582111 297 ntBASIC1.46□□□□□ -2.18
CCDC180Q9P1Z9 AC009229.3-201ENST00000608056 282 ntBASIC1.46□□□□□ -2.18
CCDC180Q9P1Z9 C8orf89-202ENST00000624510 658 ntAPPRIS P2 TSL 3 BASIC1.46□□□□□ -2.18
CCDC180Q9P1Z9 AL606495.1-201ENST00000422100 813 ntBASIC1.45□□□□□ -2.18
CCDC180Q9P1Z9 AC008869.1-201ENST00000510938 442 ntTSL 2 BASIC1.45□□□□□ -2.18
CCDC180Q9P1Z9 AL136363.1-201ENST00000605349 337 ntBASIC1.45□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 107 ms