Protein–RNA interactions for Protein: Q9NZ94

NLGN3, Neuroligin-3, humanhuman

Predictions only

Length 848 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NLGN3Q9NZ94 RNU6ATAC40P-201ENST00000408580 137 ntBASIC2.89□□□□□ -1.95
NLGN3Q9NZ94 AC114763.2-201ENST00000412593 826 ntTSL 2 BASIC2.89□□□□□ -1.95
NLGN3Q9NZ94 CDK8P2-201ENST00000415020 547 ntBASIC2.89□□□□□ -1.95
NLGN3Q9NZ94 UBE2FP1-201ENST00000416536 447 ntBASIC2.89□□□□□ -1.95
NLGN3Q9NZ94 AL359195.1-201ENST00000416657 339 ntTSL 3 BASIC2.89□□□□□ -1.95
NLGN3Q9NZ94 AL138830.1-201ENST00000435802 402 ntTSL 3 BASIC2.89□□□□□ -1.95
NLGN3Q9NZ94 AL136234.1-201ENST00000437080 349 ntTSL 2 BASIC2.89□□□□□ -1.95
NLGN3Q9NZ94 AL359636.3-201ENST00000439471 301 ntTSL 2 BASIC2.89□□□□□ -1.95
NLGN3Q9NZ94 AC005094.1-201ENST00000440420 368 ntBASIC2.89□□□□□ -1.95
NLGN3Q9NZ94 AC069540.2-201ENST00000441776 351 ntTSL 3 BASIC2.89□□□□□ -1.95
NLGN3Q9NZ94 RPS12P18-201ENST00000442381 270 ntBASIC2.89□□□□□ -1.95
NLGN3Q9NZ94 PCCA-AS1-203ENST00000455958 356 ntTSL 3 BASIC2.89□□□□□ -1.95
NLGN3Q9NZ94 SCEL-AS1-201ENST00000456280 493 ntTSL 3 BASIC2.89□□□□□ -1.95
NLGN3Q9NZ94 SNRPFP4-201ENST00000456366 242 ntBASIC2.89□□□□□ -1.95
NLGN3Q9NZ94 AC016751.1-201ENST00000458254 306 ntTSL 3 BASIC2.89□□□□□ -1.95
NLGN3Q9NZ94 ZBTB20-AS2-201ENST00000478301 372 ntTSL 2 BASIC2.89□□□□□ -1.95
NLGN3Q9NZ94 RPS15AP36-201ENST00000492022 382 ntBASIC2.89□□□□□ -1.95
NLGN3Q9NZ94 AL359273.1-203ENST00000506295 602 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
NLGN3Q9NZ94 EPGN-208ENST00000509145 222 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
NLGN3Q9NZ94 HIGD1AP13-201ENST00000509878 289 ntBASIC2.89□□□□□ -1.95
NLGN3Q9NZ94 AL359273.1-201ENST00000510918 627 ntBASIC2.89□□□□□ -1.95
NLGN3Q9NZ94 AC113385.1-201ENST00000511468 563 ntTSL 4 BASIC2.89□□□□□ -1.95
NLGN3Q9NZ94 APELA-204ENST00000515275 551 ntAPPRIS P1 TSL 3 BASIC2.89□□□□□ -1.95
NLGN3Q9NZ94 RN7SKP43-201ENST00000516173 320 ntBASIC2.89□□□□□ -1.95
NLGN3Q9NZ94 SDHAF2-203ENST00000534878 523 ntTSL 2 BASIC2.89□□□□□ -1.95
NLGN3Q9NZ94 AC079584.2-201ENST00000548756 515 ntTSL 3 BASIC2.89□□□□□ -1.95
NLGN3Q9NZ94 AC024909.2-201ENST00000553035 286 ntBASIC2.89□□□□□ -1.95
NLGN3Q9NZ94 SLC12A1-210ENST00000561031 735 ntTSL 2 BASIC2.89□□□□□ -1.95
NLGN3Q9NZ94 AC074052.2-201ENST00000562516 214 ntTSL 3 BASIC2.89□□□□□ -1.95
NLGN3Q9NZ94 AC092718.6-202ENST00000563072 408 ntTSL 2 BASIC2.89□□□□□ -1.95
NLGN3Q9NZ94 FOPNL-205ENST00000573429 646 ntTSL 3 BASIC2.89□□□□□ -1.95
NLGN3Q9NZ94 MTCYBP33-201ENST00000575007 1130 ntBASIC2.89□□□□□ -1.95
NLGN3Q9NZ94 AC103987.3-201ENST00000582071 292 ntBASIC2.89□□□□□ -1.95
NLGN3Q9NZ94 MIR3611-201ENST00000584484 83 ntBASIC2.89□□□□□ -1.95
NLGN3Q9NZ94 AL359999.1-201ENST00000604513 294 ntBASIC2.89□□□□□ -1.95
NLGN3Q9NZ94 AC098614.4-201ENST00000607601 462 ntBASIC2.89□□□□□ -1.95
NLGN3Q9NZ94 AC004908.2-201ENST00000609090 574 ntBASIC2.89□□□□□ -1.95
NLGN3Q9NZ94 AC093838.1-201ENST00000613014 469 ntBASIC2.89□□□□□ -1.95
NLGN3Q9NZ94 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC2.89□□□□□ -1.95
NLGN3Q9NZ94 AC092656.1-203ENST00000624134 423 ntBASIC2.89□□□□□ -1.95
NLGN3Q9NZ94 PROX1-AS1-244ENST00000630355 599 ntTSL 5 BASIC2.89□□□□□ -1.95
NLGN3Q9NZ94 AC008264.2-201ENST00000610193 3731 ntBASIC2.89□□□□□ -1.95
NLGN3Q9NZ94 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC2.88□□□□□ -1.95
NLGN3Q9NZ94 RNU5E-1-201ENST00000362477 120 ntBASIC2.88□□□□□ -1.95
NLGN3Q9NZ94 RNU4-75P-201ENST00000364621 146 ntBASIC2.88□□□□□ -1.95
NLGN3Q9NZ94 SNORA23-201ENST00000365128 182 ntBASIC2.88□□□□□ -1.95
NLGN3Q9NZ94 SNORA9.2-201ENST00000365361 133 ntBASIC2.88□□□□□ -1.95
NLGN3Q9NZ94 AL109755.1-201ENST00000401791 649 ntBASIC2.88□□□□□ -1.95
NLGN3Q9NZ94 RNA5SP274-201ENST00000410484 108 ntBASIC2.88□□□□□ -1.95
NLGN3Q9NZ94 RN7SKP58-201ENST00000411010 305 ntBASIC2.88□□□□□ -1.95
NLGN3Q9NZ94 SPA17P1-201ENST00000416656 452 ntBASIC2.88□□□□□ -1.95
NLGN3Q9NZ94 AL512656.1-201ENST00000427492 401 ntTSL 2 BASIC2.88□□□□□ -1.95
NLGN3Q9NZ94 DLGAP5P1-201ENST00000430307 464 ntBASIC2.88□□□□□ -1.95
NLGN3Q9NZ94 AC092839.1-201ENST00000433475 536 ntTSL 4 BASIC2.88□□□□□ -1.95
NLGN3Q9NZ94 AC007179.2-207ENST00000435557 556 ntTSL 4 BASIC2.88□□□□□ -1.95
NLGN3Q9NZ94 RPL35AP22-201ENST00000436855 335 ntBASIC2.88□□□□□ -1.95
NLGN3Q9NZ94 PATE1-202ENST00000437148 457 ntAPPRIS ALT2 TSL 1 (best) BASIC2.88□□□□□ -1.95
NLGN3Q9NZ94 AC018643.1-201ENST00000445459 414 ntTSL 5 BASIC2.88□□□□□ -1.95
NLGN3Q9NZ94 GAPDHP27-201ENST00000447427 1020 ntBASIC2.88□□□□□ -1.95
NLGN3Q9NZ94 UTAT33-202ENST00000449177 565 ntTSL 2 BASIC2.88□□□□□ -1.95
NLGN3Q9NZ94 AL033528.1-201ENST00000453780 140 ntBASIC2.88□□□□□ -1.95
NLGN3Q9NZ94 AC092620.2-201ENST00000458007 744 ntTSL 2 BASIC2.88□□□□□ -1.95
NLGN3Q9NZ94 RNU7-59P-201ENST00000459101 61 ntBASIC2.88□□□□□ -1.95
NLGN3Q9NZ94 KC877373.1-201ENST00000479066 408 ntBASIC2.88□□□□□ -1.95
NLGN3Q9NZ94 LARP1BP2-201ENST00000486594 519 ntBASIC2.88□□□□□ -1.95
NLGN3Q9NZ94 AP002075.1-201ENST00000505091 603 ntTSL 3 BASIC2.88□□□□□ -1.95
NLGN3Q9NZ94 GTF2H2C-212ENST00000512736 832 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
NLGN3Q9NZ94 AC063919.1-201ENST00000514281 254 ntTSL 3 BASIC2.88□□□□□ -1.95
NLGN3Q9NZ94 RNU6-64P-201ENST00000517119 105 ntBASIC2.88□□□□□ -1.95
NLGN3Q9NZ94 OR5G4P-201ENST00000525251 760 ntBASIC2.88□□□□□ -1.95
NLGN3Q9NZ94 AP003718.1-201ENST00000529884 583 ntTSL 4 BASIC2.88□□□□□ -1.95
NLGN3Q9NZ94 DEFB108A-201ENST00000530110 222 ntBASIC2.88□□□□□ -1.95
NLGN3Q9NZ94 AP002453.2-201ENST00000533503 320 ntBASIC2.88□□□□□ -1.95
NLGN3Q9NZ94 AC010175.1-201ENST00000538219 224 ntTSL 5 BASIC2.88□□□□□ -1.95
NLGN3Q9NZ94 AC068993.2-201ENST00000546563 395 ntTSL 5 BASIC2.88□□□□□ -1.95
NLGN3Q9NZ94 AC091534.1-202ENST00000549953 468 ntTSL 5 BASIC2.88□□□□□ -1.95
NLGN3Q9NZ94 AC090049.1-201ENST00000551075 1011 ntTSL 3 BASIC2.88□□□□□ -1.95
NLGN3Q9NZ94 AC215217.1-201ENST00000562162 347 ntTSL 3 BASIC2.88□□□□□ -1.95
NLGN3Q9NZ94 C16orf97-203ENST00000566314 281 ntTSL 3 BASIC2.88□□□□□ -1.95
NLGN3Q9NZ94 MAFTRR-204ENST00000568389 506 ntTSL 4 BASIC2.88□□□□□ -1.95
NLGN3Q9NZ94 MIR3921-201ENST00000577308 85 ntBASIC2.88□□□□□ -1.95
NLGN3Q9NZ94 MIR3913-1-201ENST00000577744 102 ntBASIC2.88□□□□□ -1.95
NLGN3Q9NZ94 AC105224.1-201ENST00000587055 421 ntBASIC2.88□□□□□ -1.95
NLGN3Q9NZ94 LINC01482-203ENST00000589610 468 ntTSL 3 BASIC2.88□□□□□ -1.95
NLGN3Q9NZ94 ACYP2-208ENST00000606865 674 ntTSL 5 BASIC2.88□□□□□ -1.95
NLGN3Q9NZ94 RNU6-87P-201ENST00000607561 108 ntBASIC2.88□□□□□ -1.95
NLGN3Q9NZ94 AL451064.1-201ENST00000607718 471 ntBASIC2.88□□□□□ -1.95
NLGN3Q9NZ94 AC103591.3-201ENST00000608684 209 ntBASIC2.88□□□□□ -1.95
NLGN3Q9NZ94 MALAT1-206ENST00000612781 234 ntTSL 3 BASIC2.88□□□□□ -1.95
NLGN3Q9NZ94 AL138880.2-201ENST00000616214 239 ntBASIC2.88□□□□□ -1.95
NLGN3Q9NZ94 ZMYM1-201ENST00000359858 4175 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
NLGN3Q9NZ94 MUC7-203ENST00000456088 2479 ntAPPRIS P2 TSL 4 BASIC2.88□□□□□ -1.95
NLGN3Q9NZ94 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC2.88□□□□□ -1.95
NLGN3Q9NZ94 DNAJC2-201ENST00000249270 1846 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
NLGN3Q9NZ94 LRRC70-201ENST00000334994 2249 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
NLGN3Q9NZ94 CPD-202ENST00000543464 4007 ntTSL 2 BASIC2.88□□□□□ -1.95
NLGN3Q9NZ94 ANP32E-209ENST00000616917 2989 ntTSL 2 BASIC2.88□□□□□ -1.95
NLGN3Q9NZ94 AC008568.2-201ENST00000623862 2313 ntBASIC2.87□□□□□ -1.95
NLGN3Q9NZ94 AL445259.1-201ENST00000587106 2984 ntTSL 5 BASIC2.87□□□□□ -1.95
NLGN3Q9NZ94 Y_RNA.194-201ENST00000363985 102 ntBASIC2.87□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 109 ms