Protein–RNA interactions for Protein: Q9NY93

DDX56, Probable ATP-dependent RNA helicase DDX56, humanhuman

Known RBP Predictions only

Length 547 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56Q9NY93 KCNT2-202ENST00000367433 5883 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
DDX56Q9NY93 CNOT4-202ENST00000356162 2594 ntTSL 5 BASIC4.06□□□□□ -1.76
DDX56Q9NY93 ROCK1P1-203ENST00000608049 2457 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
DDX56Q9NY93 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC4.05□□□□□ -1.76
DDX56Q9NY93 MIR412-201ENST00000362142 91 ntBASIC4.05□□□□□ -1.76
DDX56Q9NY93 RNU6-778P-201ENST00000363269 103 ntBASIC4.05□□□□□ -1.76
DDX56Q9NY93 MIR199A2-201ENST00000385289 110 ntBASIC4.05□□□□□ -1.76
DDX56Q9NY93 AL355989.1-202ENST00000419406 408 ntTSL 3 BASIC4.05□□□□□ -1.76
DDX56Q9NY93 DYDC1-203ENST00000421924 708 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
DDX56Q9NY93 AL080284.1-201ENST00000434493 442 ntTSL 2 BASIC4.05□□□□□ -1.76
DDX56Q9NY93 TBCAP1-201ENST00000436520 327 ntBASIC4.05□□□□□ -1.76
DDX56Q9NY93 AC011897.1-201ENST00000450715 346 ntTSL 3 BASIC4.05□□□□□ -1.76
DDX56Q9NY93 AL139260.1-202ENST00000456813 441 ntTSL 3 BASIC4.05□□□□□ -1.76
DDX56Q9NY93 AL136097.1-201ENST00000456945 913 ntBASIC4.05□□□□□ -1.76
DDX56Q9NY93 AC005062.1-201ENST00000457921 566 ntTSL 3 BASIC4.05□□□□□ -1.76
DDX56Q9NY93 RPL23AP11-201ENST00000475260 469 ntBASIC4.05□□□□□ -1.76
DDX56Q9NY93 MTAPP1-201ENST00000489154 819 ntBASIC4.05□□□□□ -1.76
DDX56Q9NY93 AC008716.1-201ENST00000511084 513 ntBASIC4.05□□□□□ -1.76
DDX56Q9NY93 LINC02122-201ENST00000511395 577 ntTSL 4 BASIC4.05□□□□□ -1.76
DDX56Q9NY93 RNU6-703P-201ENST00000516946 107 ntBASIC4.05□□□□□ -1.76
DDX56Q9NY93 NARSP2-201ENST00000518524 679 ntBASIC4.05□□□□□ -1.76
DDX56Q9NY93 AC011257.1-201ENST00000519048 281 ntTSL 3 BASIC4.05□□□□□ -1.76
DDX56Q9NY93 AC025755.1-201ENST00000521306 278 ntBASIC4.05□□□□□ -1.76
DDX56Q9NY93 AC106038.1-203ENST00000522132 362 ntTSL 2 BASIC4.05□□□□□ -1.76
DDX56Q9NY93 CARD18-201ENST00000526823 627 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
DDX56Q9NY93 AL137161.1-201ENST00000532231 390 ntBASIC4.05□□□□□ -1.76
DDX56Q9NY93 DNAJC8P1-201ENST00000554535 372 ntBASIC4.05□□□□□ -1.76
DDX56Q9NY93 AC104365.1-201ENST00000588835 394 ntTSL 5 BASIC4.05□□□□□ -1.76
DDX56Q9NY93 TEX41-238ENST00000604253 709 ntTSL 5 BASIC4.05□□□□□ -1.76
DDX56Q9NY93 LINC01515-217ENST00000620859 694 ntTSL 5 BASIC4.05□□□□□ -1.76
DDX56Q9NY93 OR4C16-201ENST00000623907 933 ntAPPRIS P1 BASIC4.05□□□□□ -1.76
DDX56Q9NY93 MIR492-201ENST00000638676 116 ntBASIC4.05□□□□□ -1.76
DDX56Q9NY93 FAM126B-202ENST00000418596 9333 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
DDX56Q9NY93 HEATR5B-201ENST00000233099 6905 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
DDX56Q9NY93 ERBIN-203ENST00000380938 4701 ntTSL 2 BASIC4.04□□□□□ -1.76
DDX56Q9NY93 TANK-205ENST00000405852 2155 ntTSL 5 BASIC4.04□□□□□ -1.76
DDX56Q9NY93 PLS3-203ENST00000420625 3150 ntTSL 5 BASIC4.04□□□□□ -1.76
DDX56Q9NY93 UEVLD-208ENST00000535484 1963 ntTSL 2 BASIC4.04□□□□□ -1.76
DDX56Q9NY93 RNU1-105P-201ENST00000363470 161 ntBASIC4.04□□□□□ -1.76
DDX56Q9NY93 RNA5SP139-201ENST00000364340 117 ntBASIC4.04□□□□□ -1.76
DDX56Q9NY93 RNU6-658P-201ENST00000384606 106 ntBASIC4.04□□□□□ -1.76
DDX56Q9NY93 RPS26P8-201ENST00000393490 348 ntBASIC4.04□□□□□ -1.76
DDX56Q9NY93 RN7SKP285-201ENST00000410137 318 ntBASIC4.04□□□□□ -1.76
DDX56Q9NY93 RNU4-6P-201ENST00000410804 122 ntBASIC4.04□□□□□ -1.76
DDX56Q9NY93 AL356095.1-201ENST00000417217 199 ntBASIC4.04□□□□□ -1.76
DDX56Q9NY93 RBM6-203ENST00000421682 684 ntTSL 2 BASIC4.04□□□□□ -1.76
DDX56Q9NY93 LINC01402-201ENST00000422226 279 ntTSL 3 BASIC4.04□□□□□ -1.76
DDX56Q9NY93 AC007560.1-201ENST00000426912 237 ntBASIC4.04□□□□□ -1.76
DDX56Q9NY93 CXorf51B-201ENST00000438525 436 ntAPPRIS P1 TSL 2 BASIC4.04□□□□□ -1.76
DDX56Q9NY93 AL078601.1-201ENST00000444542 271 ntBASIC4.04□□□□□ -1.76
DDX56Q9NY93 IGKV1OR-3-201ENST00000446944 348 ntBASIC4.04□□□□□ -1.76
DDX56Q9NY93 AL391427.1-201ENST00000451575 425 ntTSL 3 BASIC4.04□□□□□ -1.76
DDX56Q9NY93 RN7SL93P-201ENST00000463035 293 ntBASIC4.04□□□□□ -1.76
DDX56Q9NY93 AC010618.1-201ENST00000469924 477 ntBASIC4.04□□□□□ -1.76
DDX56Q9NY93 TAF8-207ENST00000482432 556 ntTSL 2 BASIC4.04□□□□□ -1.76
DDX56Q9NY93 MEPE-206ENST00000511670 550 ntTSL 4 BASIC4.04□□□□□ -1.76
DDX56Q9NY93 RNU6-1178P-201ENST00000516674 107 ntBASIC4.04□□□□□ -1.76
DDX56Q9NY93 RNU6-572P-201ENST00000516724 80 ntBASIC4.04□□□□□ -1.76
DDX56Q9NY93 RNU6-835P-201ENST00000516974 104 ntBASIC4.04□□□□□ -1.76
DDX56Q9NY93 IL7-206ENST00000520269 456 ntTSL 3 BASIC4.04□□□□□ -1.76
DDX56Q9NY93 SUMO2P20-201ENST00000520803 283 ntBASIC4.04□□□□□ -1.76
DDX56Q9NY93 MTND4P7-201ENST00000523876 130 ntBASIC4.04□□□□□ -1.76
DDX56Q9NY93 AC007368.1-201ENST00000536422 974 ntTSL 5 BASIC4.04□□□□□ -1.76
DDX56Q9NY93 AC007619.1-201ENST00000544086 412 ntTSL 5 BASIC4.04□□□□□ -1.76
DDX56Q9NY93 DAZAP2-209ENST00000549732 601 ntTSL 2 BASIC4.04□□□□□ -1.76
DDX56Q9NY93 AC008056.1-201ENST00000553322 394 ntTSL 3 BASIC4.04□□□□□ -1.76
DDX56Q9NY93 AC025884.1-201ENST00000556034 378 ntBASIC4.04□□□□□ -1.76
DDX56Q9NY93 H3F3AP1-201ENST00000559984 334 ntBASIC4.04□□□□□ -1.76
DDX56Q9NY93 BNIP3P30-201ENST00000601184 574 ntBASIC4.04□□□□□ -1.76
DDX56Q9NY93 MTND4LP5-201ENST00000605152 292 ntBASIC4.04□□□□□ -1.76
DDX56Q9NY93 MIR6716-201ENST00000613413 80 ntBASIC4.04□□□□□ -1.76
DDX56Q9NY93 YWHAEP7-203ENST00000622054 312 ntBASIC4.04□□□□□ -1.76
DDX56Q9NY93 CNOT1-223ENST00000628857 291 ntTSL 5 BASIC4.04□□□□□ -1.76
DDX56Q9NY93 AC103988.1-201ENST00000566382 2177 ntBASIC4.04□□□□□ -1.76
DDX56Q9NY93 KCNJ16-209ENST00000589377 3684 ntAPPRIS P1 TSL 5 BASIC4.04□□□□□ -1.76
DDX56Q9NY93 MYSM1-203ENST00000472487 7785 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
DDX56Q9NY93 CRB1-201ENST00000367397 9023 ntTSL 2 BASIC4.03□□□□□ -1.76
DDX56Q9NY93 PPIP5K2-201ENST00000321521 15407 ntAPPRIS P3 TSL 5 BASIC4.03□□□□□ -1.76
DDX56Q9NY93 GALNT1-201ENST00000269195 3847 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
DDX56Q9NY93 ZNF92-204ENST00000450302 2957 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
DDX56Q9NY93 ERBIN-214ENST00000511297 4257 ntAPPRIS ALT1 TSL 5 BASIC4.03□□□□□ -1.76
DDX56Q9NY93 RAD17-208ENST00000380774 2117 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
DDX56Q9NY93 AGTR1-204ENST00000418473 2071 ntTSL 5 BASIC4.03□□□□□ -1.76
DDX56Q9NY93 CATSPERB-201ENST00000256343 3623 ntAPPRIS P2 TSL 1 (best) BASIC4.03□□□□□ -1.76
DDX56Q9NY93 GABRG2-213ENST00000639046 3058 ntTSL 5 BASIC4.03□□□□□ -1.76
DDX56Q9NY93 EVI5-208ENST00000540033 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC4.03□□□□□ -1.76
DDX56Q9NY93 RNU6-799P-201ENST00000363567 107 ntBASIC4.03□□□□□ -1.76
DDX56Q9NY93 RNA5SP97-201ENST00000365006 84 ntBASIC4.03□□□□□ -1.76
DDX56Q9NY93 KLRC3-201ENST00000381903 798 ntAPPRIS P3 TSL 1 (best) BASIC4.03□□□□□ -1.76
DDX56Q9NY93 Y_RNA.453-201ENST00000384223 109 ntBASIC4.03□□□□□ -1.76
DDX56Q9NY93 RNU6-434P-201ENST00000384376 107 ntBASIC4.03□□□□□ -1.76
DDX56Q9NY93 AL022722.2-201ENST00000402519 180 ntBASIC4.03□□□□□ -1.76
DDX56Q9NY93 RPL5P18-201ENST00000406671 891 ntBASIC4.03□□□□□ -1.76
DDX56Q9NY93 EEF1A1P40-201ENST00000412883 573 ntBASIC4.03□□□□□ -1.76
DDX56Q9NY93 RPL21P90-201ENST00000415692 466 ntBASIC4.03□□□□□ -1.76
DDX56Q9NY93 AL590705.3-201ENST00000416066 474 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
DDX56Q9NY93 GAS5-208ENST00000425771 242 ntTSL 3 BASIC4.03□□□□□ -1.76
DDX56Q9NY93 RPL21P40-201ENST00000428586 483 ntBASIC4.03□□□□□ -1.76
DDX56Q9NY93 LINC01850-201ENST00000429916 357 ntTSL 3 BASIC4.03□□□□□ -1.76
DDX56Q9NY93 AL139415.2-201ENST00000431968 163 ntBASIC4.03□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 173.3 ms