Protein–RNA interactions for Protein: Q9NXB0

MKS1, Meckel syndrome type 1 protein, humanhuman

Predictions only

Length 559 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1Q9NXB0 AC016292.1-201ENST00000438344 235 ntTSL 3 BASIC3.98□□□□□ -1.77
MKS1Q9NXB0 HMGB1P37-201ENST00000439613 609 ntBASIC3.98□□□□□ -1.77
MKS1Q9NXB0 AP001432.1-201ENST00000440629 520 ntTSL 2 BASIC3.98□□□□□ -1.77
MKS1Q9NXB0 PRPS1P1-201ENST00000445305 876 ntBASIC3.98□□□□□ -1.77
MKS1Q9NXB0 HSFY6P-201ENST00000445573 403 ntBASIC3.98□□□□□ -1.77
MKS1Q9NXB0 AL360271.2-201ENST00000447710 161 ntBASIC3.98□□□□□ -1.77
MKS1Q9NXB0 AL392046.1-203ENST00000450106 651 ntTSL 2 BASIC3.98□□□□□ -1.77
MKS1Q9NXB0 TH2LCRR-203ENST00000457489 439 ntTSL 3 BASIC3.98□□□□□ -1.77
MKS1Q9NXB0 DYNLL1P5-201ENST00000467158 270 ntBASIC3.98□□□□□ -1.77
MKS1Q9NXB0 OARD1-209ENST00000471367 401 ntTSL 2 BASIC3.98□□□□□ -1.77
MKS1Q9NXB0 RNU6-189P-201ENST00000516120 101 ntBASIC3.98□□□□□ -1.77
MKS1Q9NXB0 IGHV3-76-201ENST00000522465 295 ntBASIC3.98□□□□□ -1.77
MKS1Q9NXB0 AC087241.2-201ENST00000535801 324 ntBASIC3.98□□□□□ -1.77
MKS1Q9NXB0 AC243972.3-201ENST00000539655 198 ntBASIC3.98□□□□□ -1.77
MKS1Q9NXB0 AC073655.2-202ENST00000547927 401 ntTSL 3 BASIC3.98□□□□□ -1.77
MKS1Q9NXB0 AC003687.1-201ENST00000578040 427 ntTSL 3 BASIC3.98□□□□□ -1.77
MKS1Q9NXB0 MIR5692A1-201ENST00000580523 69 ntBASIC3.98□□□□□ -1.77
MKS1Q9NXB0 GALP-203ENST00000590002 150 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
MKS1Q9NXB0 AC103705.1-201ENST00000619013 241 ntBASIC3.98□□□□□ -1.77
MKS1Q9NXB0 MUCL1-205ENST00000619042 243 ntAPPRIS ALT2 TSL 5 BASIC3.98□□□□□ -1.77
MKS1Q9NXB0 SNORD39.4-201ENST00000620099 78 ntBASIC3.98□□□□□ -1.77
MKS1Q9NXB0 PLCE1P1-201ENST00000622094 305 ntBASIC3.98□□□□□ -1.77
MKS1Q9NXB0 AC022418.1-201ENST00000624118 445 ntBASIC3.98□□□□□ -1.77
MKS1Q9NXB0 THOC1-221ENST00000631280 2011 ntTSL 5 BASIC3.98□□□□□ -1.77
MKS1Q9NXB0 RMDN2-205ENST00000407257 2280 ntTSL 5 BASIC3.98□□□□□ -1.77
MKS1Q9NXB0 ZNF807-201ENST00000328088 1707 ntBASIC3.98□□□□□ -1.77
MKS1Q9NXB0 C6orf10-207ENST00000533191 2170 ntAPPRIS ALT2 TSL 1 (best) BASIC3.97□□□□□ -1.77
MKS1Q9NXB0 LINC01376-202ENST00000424895 1949 ntTSL 2 BASIC3.97□□□□□ -1.77
MKS1Q9NXB0 TCEANC-201ENST00000380600 2988 ntAPPRIS P1 TSL 3 BASIC3.97□□□□□ -1.77
MKS1Q9NXB0 AL391684.1-201ENST00000416191 2998 ntTSL 5 BASIC3.97□□□□□ -1.77
MKS1Q9NXB0 MFSD8-216ENST00000641147 4009 ntBASIC3.97□□□□□ -1.77
MKS1Q9NXB0 GABRG2-213ENST00000639046 3058 ntTSL 5 BASIC3.97□□□□□ -1.77
MKS1Q9NXB0 FER-201ENST00000281092 12119 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
MKS1Q9NXB0 Y_RNA.166-201ENST00000363730 102 ntBASIC3.97□□□□□ -1.77
MKS1Q9NXB0 OR51A4-201ENST00000380373 1002 ntAPPRIS P1 BASIC3.97□□□□□ -1.77
MKS1Q9NXB0 Y_RNA.530-201ENST00000384587 101 ntBASIC3.97□□□□□ -1.77
MKS1Q9NXB0 MIR578-201ENST00000384828 96 ntBASIC3.97□□□□□ -1.77
MKS1Q9NXB0 RNA5SP219-201ENST00000390940 113 ntBASIC3.97□□□□□ -1.77
MKS1Q9NXB0 HLFP1-201ENST00000402375 499 ntBASIC3.97□□□□□ -1.77
MKS1Q9NXB0 RNU4-25P-201ENST00000410569 230 ntBASIC3.97□□□□□ -1.77
MKS1Q9NXB0 AL109914.1-201ENST00000414740 146 ntTSL 5 BASIC3.97□□□□□ -1.77
MKS1Q9NXB0 AC010163.2-201ENST00000416341 381 ntTSL 2 BASIC3.97□□□□□ -1.77
MKS1Q9NXB0 AL158156.1-201ENST00000422509 473 ntBASIC3.97□□□□□ -1.77
MKS1Q9NXB0 TMEM167AP1-201ENST00000423409 219 ntBASIC3.97□□□□□ -1.77
MKS1Q9NXB0 ZNF863P-201ENST00000426746 417 ntBASIC3.97□□□□□ -1.77
MKS1Q9NXB0 RPS29P17-201ENST00000430795 166 ntBASIC3.97□□□□□ -1.77
MKS1Q9NXB0 RPL23AP69-201ENST00000431134 458 ntBASIC3.97□□□□□ -1.77
MKS1Q9NXB0 IFNA20P-201ENST00000436840 528 ntBASIC3.97□□□□□ -1.77
MKS1Q9NXB0 AL441989.1-201ENST00000454204 382 ntTSL 3 BASIC3.97□□□□□ -1.77
MKS1Q9NXB0 LINC01755-201ENST00000455010 453 ntTSL 2 BASIC3.97□□□□□ -1.77
MKS1Q9NXB0 AC067945.3-201ENST00000456176 386 ntTSL 5 BASIC3.97□□□□□ -1.77
MKS1Q9NXB0 RNU7-167P-201ENST00000459160 62 ntBASIC3.97□□□□□ -1.77
MKS1Q9NXB0 RPS23P1-201ENST00000491662 432 ntBASIC3.97□□□□□ -1.77
MKS1Q9NXB0 AC026979.1-201ENST00000492525 396 ntBASIC3.97□□□□□ -1.77
MKS1Q9NXB0 HIGD1AP13-201ENST00000509878 289 ntBASIC3.97□□□□□ -1.77
MKS1Q9NXB0 AC096711.2-201ENST00000510592 454 ntTSL 5 BASIC3.97□□□□□ -1.77
MKS1Q9NXB0 AC112206.3-201ENST00000514578 389 ntBASIC3.97□□□□□ -1.77
MKS1Q9NXB0 AC104211.1-202ENST00000521307 866 ntTSL 3 BASIC3.97□□□□□ -1.77
MKS1Q9NXB0 AC090115.3-201ENST00000553218 849 ntBASIC3.97□□□□□ -1.77
MKS1Q9NXB0 AC025627.2-201ENST00000576220 160 ntBASIC3.97□□□□□ -1.77
MKS1Q9NXB0 AC007631.1-201ENST00000578545 189 ntTSL 3 BASIC3.97□□□□□ -1.77
MKS1Q9NXB0 VN1R80P-201ENST00000597126 338 ntBASIC3.97□□□□□ -1.77
MKS1Q9NXB0 AC012119.1-201ENST00000603184 222 ntBASIC3.97□□□□□ -1.77
MKS1Q9NXB0 CTHRC1P1-201ENST00000605383 469 ntBASIC3.97□□□□□ -1.77
MKS1Q9NXB0 DUSP12P1-201ENST00000612874 516 ntBASIC3.97□□□□□ -1.77
MKS1Q9NXB0 AL591424.2-201ENST00000617023 128 ntBASIC3.97□□□□□ -1.77
MKS1Q9NXB0 AC105265.4-201ENST00000618391 306 ntTSL 5 BASIC3.97□□□□□ -1.77
MKS1Q9NXB0 DLX6-AS1_1.1-201ENST00000621599 180 ntBASIC3.97□□□□□ -1.77
MKS1Q9NXB0 AC027309.3-201ENST00000623419 351 ntBASIC3.97□□□□□ -1.77
MKS1Q9NXB0 CCT7-217ENST00000626868 249 ntTSL 5 BASIC3.97□□□□□ -1.77
MKS1Q9NXB0 AC099654.5-201ENST00000636479 350 ntBASIC3.97□□□□□ -1.77
MKS1Q9NXB0 UFM1-201ENST00000239878 3138 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
MKS1Q9NXB0 RNF6-201ENST00000346166 3282 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
MKS1Q9NXB0 AL136164.4-201ENST00000625013 2135 ntBASIC3.97□□□□□ -1.77
MKS1Q9NXB0 ZNF85-203ENST00000345030 1689 ntAPPRIS ALT2 TSL 5 BASIC3.97□□□□□ -1.77
MKS1Q9NXB0 DST-201ENST00000244364 16742 ntTSL 1 (best) BASIC3.96□□□□□ -1.77
MKS1Q9NXB0 ESCO1-201ENST00000269214 4523 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.77
MKS1Q9NXB0 CCDC102B-201ENST00000360242 2711 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
MKS1Q9NXB0 NDST4-201ENST00000264363 3351 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
MKS1Q9NXB0 AC087521.2-201ENST00000499066 2190 ntTSL 2 BASIC3.96□□□□□ -1.78
MKS1Q9NXB0 CEP170-202ENST00000366542 6828 ntAPPRIS P1 TSL 5 BASIC3.96□□□□□ -1.78
MKS1Q9NXB0 SLITRK5-201ENST00000325089 21103 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
MKS1Q9NXB0 Y_RNA.33-201ENST00000362591 102 ntBASIC3.96□□□□□ -1.78
MKS1Q9NXB0 RNU6-395P-201ENST00000365662 106 ntBASIC3.96□□□□□ -1.78
MKS1Q9NXB0 RNU2-41P-201ENST00000410991 178 ntBASIC3.96□□□□□ -1.78
MKS1Q9NXB0 USP9YP20-201ENST00000419224 558 ntBASIC3.96□□□□□ -1.78
MKS1Q9NXB0 PDCL2P1-201ENST00000419302 352 ntBASIC3.96□□□□□ -1.78
MKS1Q9NXB0 AL162726.4-201ENST00000422010 673 ntTSL 5 BASIC3.96□□□□□ -1.78
MKS1Q9NXB0 ACTR3BP6-201ENST00000422332 1241 ntBASIC3.96□□□□□ -1.78
MKS1Q9NXB0 AC073063.1-201ENST00000434352 607 ntBASIC3.96□□□□□ -1.78
MKS1Q9NXB0 LINC01208-202ENST00000434969 827 ntTSL 2 BASIC3.96□□□□□ -1.78
MKS1Q9NXB0 LINC00302-201ENST00000444515 302 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
MKS1Q9NXB0 RPL23AP24-201ENST00000458203 385 ntBASIC3.96□□□□□ -1.78
MKS1Q9NXB0 AC008549.1-201ENST00000512900 643 ntBASIC3.96□□□□□ -1.78
MKS1Q9NXB0 RNU4-49P-201ENST00000516080 140 ntBASIC3.96□□□□□ -1.78
MKS1Q9NXB0 RN7SKP256-201ENST00000517201 314 ntBASIC3.96□□□□□ -1.78
MKS1Q9NXB0 AC091944.1-201ENST00000521984 449 ntTSL 3 BASIC3.96□□□□□ -1.78
MKS1Q9NXB0 AC100768.1-201ENST00000525512 506 ntTSL 3 BASIC3.96□□□□□ -1.78
MKS1Q9NXB0 LINC02386-202ENST00000551287 564 ntTSL 4 BASIC3.96□□□□□ -1.78
MKS1Q9NXB0 AL355102.1-201ENST00000555383 460 ntTSL 5 BASIC3.96□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 158.9 ms